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3. RECOMB 1999: Lyon, France
- Sorin Istrail, Pavel A. Pevzner, Michael S. Waterman:
Proceedings of the Third Annual International Conference on Research in Computational Molecular Biology, RECOMB 1999, Lyon, France, April 11-14, 1999. ACM 1999, ISBN 1-58113-069-4 - Eric L. Anson, Eugene W. Myers:
Algorithms for whole genome shotgun sequencing. 1-9 - Timothy L. Bailey, William Noble Grundy:
Classifying proteins by family using the product of correlated p-values. 10-14 - Gill Bejerano, Golan Yona:
Modeling protein families using probabilistic suffix trees. 15-24 - Jadwiga R. Bienkowska, Robert G. Rogers, Temple F. Smith:
A method for optimal design of a threading scoring function. 25-32 - Amir Ben-Dor, Zohar Yakhini
:
Clustering gene expression patterns. 33-42 - Laurent Bize, Florence Muri, Franck Samson, François Rodolphe, S. Dusko Ehrlich, Bernard Prun, Philippe Bessières:
Searching gene transfers on Bacillus subtilis using hidden Markov models. 43-49 - Piotr Berman, Zheng Zhang, Yuri I. Wolf, Eugene V. Koonin, Webb Miller:
Winnowing sequences from a database search. 50-58 - Vincent Berry, David Bryant:
Faster reliable phylogenetic analysis. 59-68 - Peer Bork:
Comparing genes and genomes (abstract): from polymorphism to phylogeny. 69-76 - Stefan Burkhardt, Andreas Crauser, Paolo Ferragina, Hans-Peter Lenhof, Eric Rivals, Martin Vingron:
q-gram based database searching using a suffix array (QUASAR). 77-83 - Alberto Caprara:
Formulations and hardness of multiple sorting by reversals. 84-94 - Ting Chen, Vladimir Filkov, Steven Skiena:
Identifying gene regulatory networks from experimental data. 94-103 - L. Paul Chew, Daniel P. Huttenlocher, Klara Kedem, Jon M. Kleinberg:
Fast detection of common geometric substructure in proteins. 104-114 - Sarah A. Teichmann, Jong-Chan Park, Cyrus Chothia:
Genome sequences and protein structures. 114 - Thomas Christof, John D. Kececioglu:
Computing physical maps of chromosomes with nonoverlapping probes by branch-and-cut. 115-123 - Barry Cohen, Steven Skiena
:
Optimizing combinatorial library construction via split synthesis. 124-133 - Daniel Cohen, Marta Blumenfeld, Ilya Chumakov, Nicholas J. Schork:
Whole genome association studies in humans (abstract). 134 - Vlado Dancík, Theresa A. Addona, Karl R. Clauser, James E. Vath:
De Novo peptide sequencing via tandem mass spectrometry: a graph-theoretical approach. 135-144 - Alan A. Dombkowski, Gordon M. Crippen:
A solvation potential with improved contact definitions and optimized by extensive threading. 145-153 - Nadia El-Mabrouk, David Bryant, David Sankoff:
Reconstructing the pre-doubling genome. 154-163 - Aris Floratos, Isidore Rigoutsos, Laxmi Parida, Gustavo Stolovitzky, Yuan Gao:
Sequence homology detection through large scale pattern discovery. 164-169 - Christian V. Forst
, Klaus Schulten:
Evolution of metabolisms: a new method for the comparison of metabolic pathways. 174-181 - Gregory R. Grant, R. S. Spielman, Elisabetta Manduchi, Vivian G. Cheung, Warren J. Ewens:
Significance testing for genomic mismatch scanning. 182-187 - Erez Hartuv, Armin O. Schmitt, Jörg Lange, Sebastian Meier-Ewert, Hans Lehrach, Ron Shamir:
An algorithm for clustering cDNAs for gene expression analysis. 188-197 - Daniel H. Huson, Scott Nettles, Tandy J. Warnow:
Obtaining highly accurate topology estimates of evolutionary trees from very short sequences. 198-207 - Richard M. Karp, Roland Stoughton, Ka Yee Yeung:
Algorithms for choosing differential gene expression experiments. 208-217 - Lawrence A. Kelley, Robert M. MacCallum
, Michael J. E. Sternberg
:
Recognition of remote protein homologies using three-dimensional information to generate a position specific scoring matrix in the program 3D-PSSM. 218-225 - Jon M. Kleinberg:
Efficient algorithms for protein sequence design and the analysis of certain evolutionary fitness landscapes. 226-237 - Richard H. Lathrop:
An anytime algorithm for gapped block protein threading with pair interactions. 238-249 - Steven M. LaValle, Paul W. Finn, Lydia E. Kavraki, Jean-Claude Latombe:
Efficient database screening for rational drug design using pharmacophore-constrained conformational search. 250-260 - Rune B. Lyngsø, Michael Zuker, Christian N. S. Pedersen:
Internal loops in RNA secondary structure prediction. 260-267 - Guy Mayraz, Ron Shamir:
Construction of physical maps from oligonucleotide fingerprints data. 268-277 - John Moult:
The past, present and future of protein structure prediction (abstract). 278 - Gene Myers:
Progress toward the whole-genome shotgun sequencing of Drosophila. 279 - Julie C. Mitchell, J. Ben Rosen, Andrew T. Phillips, Lynn F. Ten Eyck:
Coupled optimization in protein docking. 280-284 - Lior Pachter, Serafim Batzoglou, Valentin I. Spitkovsky, William S. Beebee, Eric S. Lander, Bonnie Berger
, Daniel J. Kleitman:
A dictionary based approach for gene annotation. 285-294 - Franco P. Preparata, Alan M. Frieze, Eli Upfal:
On the power of universal bases in sequencing by hybridization. 295-301 - David Sankoff, Mathieu Blanchette:
Probability models for genome rearrangement and linear invariants for phylogenetic inference. 302-309 - Piotr P. Slonimski:
Comparison of complete genomes: Organization and evolution (abstract). 310 - Ed Southern:
DNA microarrays - the how and the why. 311 - Maxim Totrov
, Ruben Abagyan:
Derivation of sensitive discrimination potential for virtual ligand screening. 312-320 - Martin J. Bayley, Valerie J. Gillet, Peter Willett, John Bradshaw, Darren V. S. Green:
Computational analysis of molecular diversity for drug discovery. 321-330 - John C. Wooley:
Trends in computational biology. 331
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