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2010 – 2019
- 2015
[j20]Tony E. Lewis, Ian Sillitoe, Antonina Andreeva
, Tom L. Blundell, Daniel W. A. Buchan, Cyrus Chothia, Domenico Cozzetto, Jose M. Dana, Ioannis Filippis, Julian Gough, David T. Jones, Lawrence A. Kelley, Gerard J. Kleywegt, Federico Minneci, Jaina Mistry, Alexey G. Murzin, Bernardo Ochoa-Montaño, Matt E. Oates, Marco Punta, Owen J. L. Rackham, Jonathan Stahlhacke, Michael J. E. Sternberg, Sameer Velankar, Christine A. Orengo:
Genome3D: exploiting structure to help users understand their sequences. Nucleic Acids Res. 43(Database-Issue): 382-386 (2015)- 2014
- [j19]Antonina Andreeva, Dave Howorth, Cyrus Chothia, Eugene Kulesha, Alexey G. Murzin:
SCOP2 prototype: a new approach to protein structure mining. Nucleic Acids Res. 42(Database-Issue): 310-314 (2014) - 2013
- [j18]Tony E. Lewis, Ian Sillitoe, Antonina Andreeva, Tom L. Blundell, Daniel W. A. Buchan, Cyrus Chothia, Alison L. Cuff, Jose M. Dana, Ioannis Filippis, Julian Gough, Sarah Hunter, David T. Jones, Lawrence A. Kelley, Gerard J. Kleywegt, Federico Minneci, Alex L. Mitchell, Alexey G. Murzin, Bernardo Ochoa-Montaño, Owen J. L. Rackham, James Smith, Michael J. E. Sternberg, Sameer Velankar, Corin Yeats, Christine A. Orengo:
Genome3D: a UK collaborative project to annotate genomic sequences with predicted 3D structures based on SCOP and CATH domains. Nucleic Acids Res. 41(Database-Issue): 499-507 (2013) - 2011
- [j17]David A. de Lima Morais, Hai Fang, Owen J. L. Rackham, Derek Wilson, Ralph Pethica, Cyrus Chothia, Julian Gough:
SUPERFAMILY 1.75 including a domain-centric gene ontology method. Nucleic Acids Res. 39(Database-Issue): 427-434 (2011)
2000 – 2009
- 2009
- [j16]Derek Wilson, Ralph Pethica, Yiduo Zhou, Charles Talbot, Christine Vogel, Martin Madera, Cyrus Chothia, Julian Gough:
SUPERFAMILY - sophisticated comparative genomics, data mining, visualization and phylogeny. Nucleic Acids Res. 37(Database-Issue): 380-386 (2009) - 2008
- [j15]Antonina Andreeva, Dave Howorth, John-Marc Chandonia, Steven E. Brenner, Tim J. P. Hubbard, Cyrus Chothia, Alexey G. Murzin:
Data growth and its impact on the SCOP database: new developments. Nucleic Acids Res. 36(Database-Issue): 419-425 (2008) - 2007
- [j14]Derek Wilson, Martin Madera, Christine Vogel, Cyrus Chothia, Julian Gough:
The SUPERFAMILY database in 2007: families and functions. Nucleic Acids Res. 35(Database-Issue): 308-313 (2007) - 2006
- [j13]Christine Vogel, Cyrus Chothia:
Protein Family Expansions and Biological Complexity. PLoS Comput. Biol. 2(5) (2006) - [j12]Emmanuel D. Levy, José B. Pereira-Leal, Cyrus Chothia, Sarah A. Teichmann:
3D Complex: A Structural Classification of Protein Complexes. PLoS Comput. Biol. 2(11) (2006) - 2004
- [j11]Antonina Andreeva, Dave Howorth, Steven E. Brenner, Tim J. P. Hubbard, Cyrus Chothia, Alexey G. Murzin:
SCOP database in 2004: refinements integrate structure and sequence family data. Nucleic Acids Res. 32(Database-Issue): 226-229 (2004) - [j10]Martin Madera, Christine Vogel, Sarah K. Kummerfeld, Cyrus Chothia, Julian Gough:
The SUPERFAMILY database in 2004: additions and improvements. Nucleic Acids Res. 32(Database-Issue): 235-239 (2004) - 2002
- [j9]Loredana Lo Conte, Steven E. Brenner, Tim J. P. Hubbard, Cyrus Chothia, Alexey G. Murzin:
SCOP database in 2002: refinements accommodate structural genomics. Nucleic Acids Res. 30(1): 264-267 (2002) - [j8]Julian Gough, Cyrus Chothia:
SUPERFAMILY: HMMs representing all proteins of known structure. SCOP sequence searches, alignments and genome assignments. Nucleic Acids Res. 30(1): 268-272 (2002) - 2000
- [j7]Jong-Chan Park, Liisa Holm, Cyrus Chothia:
Sequence search algorithm assessment and testing toolkit (SAT). Bioinform. 16(2): 104-110 (2000) - [j6]Sarah A. Teichmann, Cyrus Chothia, George M. Church, Jong-Chan Park:
Fast assignment of protein structures to sequences using the Intermediate Sequence Library PDB-ISL. Bioinform. 16(2): 117-124 (2000) - [j5]Jong-Chan Park, Liisa Holm, Andreas Heger, Cyrus Chothia:
RSDB: representative protein sequence databases have high information content. Bioinform. 16(5): 458-464 (2000) - [j4]Ognyan Stoyanov, Alexander Kister, Israel M. Gelfand, Casimir A. Kulikowski, Cyrus Chothia:
Geometric Invariant Core for the CL and CH1 Domains of Immunoglobulin Molecules. J. Comput. Biol. 7(5): 673-684 (2000) - [j3]Loredana Lo Conte, Bart Ailey, Tim J. P. Hubbard, Steven E. Brenner, Alexey G. Murzin, Cyrus Chothia:
SCOP: a Structural Classification of Proteins database. Nucleic Acids Res. 28(1): 257-259 (2000) - [c2]Sarah A. Teichmann, Cyrus Chothia, George M. Church, Jong-Chan Park:
PDB_ISL: an intermediate sequence library for protein structure assignment. RECOMB 2000: 283-289
1990 – 1999
- 1999
- [j2]Tim J. P. Hubbard, Bart Ailey, Steven E. Brenner, Alexey G. Murzin, Cyrus Chothia:
SCOP: a Structural Classification of Proteins database. Nucleic Acids Res. 27(1): 254-256 (1999) - [c1]Sarah A. Teichmann, Jong-Chan Park, Cyrus Chothia:
Genome sequences and protein structures. RECOMB 1999: 114 - 1997
- [j1]Tim J. P. Hubbard, Alexey G. Murzin, Steven E. Brenner, Cyrus Chothia:
SCOP: a structural classification of proteins database. Nucleic Acids Res. 25(1): 236-239 (1997)
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