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Bertram Ludäscher

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affiliation: University of Illinois at Urbana-Champaign, USA
affiliation: University of California, Davis, USA

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1998
[b1]
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Bertram Ludäscher:
Integration of Active and Deductive Database Rules. University of Freiburg, Freiburg im Breisgau, Germany, DISDBIS 45, Infix Verlag, St. Augustin, Germany 1998, ISBN 3-89601-445-5, pp. 1-147

Journal Articles

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2022
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Lan Li, Bertram Ludäscher:
On the Reusability of Data Cleaning Workflows. Int. J. Digit. Curation 17(1): 6 (2022)
2020
[j47]
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Seokki Lee, Bertram Ludäscher, Boris Glavic:
Approximate Summaries for Why and Why-not Provenance. Proc. VLDB Endow. 13(6): 912-924 (2020)
2019
[j46]
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Adam Brinckman, Kyle Chard, Niall Gaffney, Mihael Hategan, Matthew B. Jones, Kacper Kowalik, Sivakumar Kulasekaran, Bertram Ludäscher, Bryce D. Mecum, Jarek Nabrzyski, Victoria Stodden, Ian J. Taylor, Matthew J. Turk, Kandace Turner:
Computing environments for reproducibility: Capturing the "Whole Tale". Future Gener. Comput. Syst. 94: 854-867 (2019)
[j45]
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Nico M. Franz, Lukas J. Musher, Joseph W. Brown, Shizhuo Yu, Bertram Ludäscher:
Verbalizing phylogenomic conflict: Representation of node congruence across competing reconstructions of the neoavian explosion. PLoS Comput. Biol. 15(2) (2019)
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Seokki Lee, Bertram Ludäscher, Boris Glavic:
PUG: a framework and practical implementation for why and why-not provenance. VLDB J. 28(1): 47-71 (2019)
2018
[j43]
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Megan Senseney, Eleanor Dickson, Beth Namachchivaya, Bertram Ludäscher:
Data Mining Research with In-copyright and Use-limited Text Datasets: Preliminary Findings from a Systematic Literature Review and Stakeholder Interviews. Int. J. Digit. Curation 13(1): 183-194 (2018)
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Seokki Lee, Bertram Ludäscher, Boris Glavic:
Provenance Summaries for Answers and Non-Answers. Proc. VLDB Endow. 11(12): 1954-1957 (2018)
2017
[j41]
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Qian Zhang, Yang Cao, Qiwen Wang, Duc Vu, Priyaa Thavasimani, Timothy M. McPhillips, Paolo Missier, Peter Slaughter, Christopher Jones, Matthew B. Jones, Bertram Ludäscher:
Revealing the Detailed Lineage of Script Outputs Using Hybrid Provenance. Int. J. Digit. Curation 12(2): 390-408 (2017)
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Michael R. Gryk, Bertram Ludäscher:
Workflows and Provenance: Toward Information Science Solutions for the Natural Sciences. Libr. Trends 65(4): 555-562 (2017)
[j39]
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Anandarup Sarkar, Sven Köhler, Bertram Ludäscher, Matt Bishop:
Insider Attack Identification and Prevention in Collection-Oriented Dataflow-Based Processes. IEEE Syst. J. 11(2): 522-533 (2017)
2016
[j38]
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Hong Cui, Dongfang Xu, Steven S. Chong, Martin Ramirez, Thomas Rodenhausen, James A. Macklin, Bertram Ludäscher, Robert A. Morris, Eduardo M. Soto, Nicolás Mongiardino Koch:
Introducing Explorer of Taxon Concepts with a case study on spider measurement matrix building. BMC Bioinform. 17: 471:1-471:22 (2016)
[j37]
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Nico M. Franz, Mingmin Chen, Parisa Kianmajd, Shizhuo Yu, Shawn Bowers, Alan S. Weakley, Bertram Ludäscher:
Names are not good enough: Reasoning over taxonomic change in the Andropogon complex. Semantic Web 7(6): 645-667 (2016)
2014
[j36]
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Víctor Cuevas-Vicenttín, Parisa Kianmajd, Bertram Ludäscher, Paolo Missier, Fernando Seabra Chirigati, Yaxing Wei, David Koop, Saumen C. Dey:
The PBase Scientific Workflow Provenance Repository. Int. J. Digit. Curation 9(2): 28-38 (2014)
[j35]
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Tianhong Song, Sven Köhler, Bertram Ludäscher, James Hanken, Maureen Kelly, David Lowery, James A. Macklin, Paul J. Morris, Robert A. Morris:
Towards Automated Design, Analysis and Optimization of Declarative Curation Workflows. Int. J. Digit. Curation 9(2): 111-122 (2014)
2012
[j34]
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Thomas Stropp, Timothy M. McPhillips, Bertram Ludäscher, Mark Bieda:
Workflows for microarray data processing in the Kepler environment. BMC Bioinform. 13: 102 (2012)
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Víctor Cuevas-Vicenttín, Saumen C. Dey, Sven Köhler, Sean Riddle, Bertram Ludäscher:
Scientific Workflows and Provenance: Introduction and Research Opportunities. Datenbank-Spektrum 12(3): 193-203 (2012)
[j32]
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Paolo Missier, Bertram Ludäscher, Saumen C. Dey, Michael Wang, Timothy M. McPhillips, Shawn Bowers, Michael Agun, Ilkay Altintas:
Golden Trail: Retrieving the Data History that Matters from a Comprehensive Provenance Repository. Int. J. Digit. Curation 7(1): 139-150 (2012)
[j31]
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Richard Littauer, Karthik Ram, Bertram Ludäscher, William Michener, Rebecca Koskela:
Trends in Use of Scientific Workflows: Insights from a Public Repository and Recommendations for Best Practice. Int. J. Digit. Curation 7(2): 92-100 (2012)
2011
[j30]
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Ilkay Altintas, Manish Kumar Anand, Trung N. Vuong, Shawn Bowers, Bertram Ludäscher, Peter M. A. Sloot:
A Data Model for Analyzing User Collaborations in Workflow-Driven e-Science. Int. J. Comput. Their Appl. 18(3): 160-179 (2011)
2010
[j29]
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Amber L. Hartman, Sean Riddle, Timothy M. McPhillips, Bertram Ludäscher, Jonathan A. Eisen:
WATERS: a Workflow for the Alignment, Taxonomy, and Ecology of Ribosomal Sequences. BMC Bioinform. 11: 317 (2010)
[j28]
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Daniel Zinn, Shawn Bowers, Sven Köhler, Bertram Ludäscher:
Parallelizing XML data-streaming workflows via MapReduce. J. Comput. Syst. Sci. 76(6): 447-463 (2010)
2009
[j27]
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Timothy M. McPhillips, Shawn Bowers, Daniel Zinn, Bertram Ludäscher:
Scientific workflow design for mere mortals. Future Gener. Comput. Syst. 25(5): 541-551 (2009)
[j26]
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David Thau, Shawn Bowers, Bertram Ludäscher:
Merging Taxonomies under RCC-5 Algebraic Articulations. J. Comput. Sci. Eng. 3(2): 109-126 (2009)
2008
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Luc Moreau, Bertram Ludäscher, Ilkay Altintas, Roger S. Barga, Shawn Bowers, Steven P. Callahan, George Chin Jr., Ben Clifford, Shirley Cohen, Sarah Cohen Boulakia, Susan B. Davidson, Ewa Deelman, Luciano A. Digiampietri, Ian T. Foster, Juliana Freire, James Frew, Joe Futrelle, Tara Gibson, Yolanda Gil, Carole A. Goble, Jennifer Golbeck, Paul Groth, David A. Holland, Sheng Jiang, Jihie Kim, David Koop, Ales Krenek, Timothy M. McPhillips, Gaurang Mehta, Simon Miles, Dominic Metzger, Steve Munroe, Jim Myers, Beth Plale, Norbert Podhorszki, Varun Ratnakar, Emanuele Santos, Carlos Eduardo Scheidegger, Karen Schuchardt, Margo I. Seltzer, Yogesh L. Simmhan, Cláudio T. Silva, Peter Slaughter, Eric G. Stephan, Robert Stevens, Daniele Turi, Huy T. Vo, Michael Wilde, Jun Zhao, Yong Zhao:
Special Issue: The First Provenance Challenge. Concurr. Comput. Pract. Exp. 20(5): 409-418 (2008)
[j24]
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Bertram Ludäscher, Norbert Podhorszki, Ilkay Altintas, Shawn Bowers, Timothy M. McPhillips:
From computation models to models of provenance: the RWS approach. Concurr. Comput. Pract. Exp. 20(5): 507-518 (2008)
[j23]
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Shawn Bowers, Timothy M. McPhillips, Bertram Ludäscher:
Provenance in collection-oriented scientific workflows. Concurr. Comput. Pract. Exp. 20(5): 519-529 (2008)
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James Cheney, Peter Buneman, Bertram Ludäscher:
Report on the Principles of Provenance Workshop. SIGMOD Rec. 37(1): 62-65 (2008)
2007
[j21]
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Susan B. Davidson, Sarah Cohen Boulakia, Anat Eyal, Bertram Ludäscher, Timothy M. McPhillips, Shawn Bowers, Manish Kumar Anand, Juliana Freire:
Provenance in Scientific Workflow Systems. IEEE Data Eng. Bull. 30(4): 44-50 (2007)
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David Thau, Bertram Ludäscher:
Reasoning about taxonomies in first-order logic. Ecol. Informatics 2(3): 195-209 (2007)
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William Michener, James Beach, Matthew B. Jones, Bertram Ludäscher, Deana Pennington, Ricardo Scachetti Pereira, Arcot Rajasekar, Mark Schildhauer:
A knowledge environment for the biodiversity and ecological sciences. J. Intell. Inf. Syst. 29(1): 111-126 (2007)
[j18]
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Alin Deutsch, Bertram Ludäscher, Alan Nash:
Rewriting queries using views with access patterns under integrity constraints. Theor. Comput. Sci. 371(3): 200-226 (2007)
2006
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Bertram Ludäscher, Ilkay Altintas, Chad Berkley, Dan Higgins, Efrat Jaeger, Matthew B. Jones, Edward A. Lee, Jing Tao, Yang Zhao:
Scientific workflow management and the Kepler system. Concurr. Comput. Pract. Exp. 18(10): 1039-1065 (2006)
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Amarnath Gupta, Bertram Ludäscher, Louiqa Raschid:
Report on the 2nd International Workshop on Data Integration in the Life Sciences: (DILS'05). SIGMOD Rec. 35(2): 56-58 (2006)
2005
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Bertram Ludäscher, Carole A. Goble:
Guest editors' introduction to the special section on scientific workflows. SIGMOD Rec. 34(3): 3-4 (2005)
2004
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Zachary G. Ives, Bertram Ludäscher, Ioana Manolescu:
Reminiscences on Influential Papers - Kenneth A. Ross. SIGMOD Rec. 33(3): 49-50 (2004)
2003
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Amarnath Gupta, Bertram Ludäscher, Jeffrey S. Grethe, Maryann E. Martone:
Towards a formalization of disease-specific ontologies for neuroinformatics. Neural Networks 16(9): 1277-1292 (2003)
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Amarnath Gupta, Bertram Ludäscher:
The Many Faces of Process Interaction Graphs: A Data Management Perspective. OMICS 7(1): 105-108 (2003)
2002
[j11]
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Omar Boucelma, Silvana Castano, Carole A. Goble, Vanja Josifovski, Zoé Lacroix, Bertram Ludäscher:
Report on the EDBT'02 Panel on Scientific Data Integration. SIGMOD Rec. 31(4): 107-112 (2002)
[j10]
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Wolfgang May, Bertram Ludäscher:
Understanding the global semantics of referential actions using logic rules. ACM Trans. Database Syst. 27(4): 343-397 (2002)
2001
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Gully Burns, Klaas E. Stephan, Bertram Ludäscher, Amarnath Gupta, Rolf Kötter:
Towards a federated neuroscientific knowledge management system using brain atlases. Neurocomputing 38-40: 1633-1641 (2001)
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Bertram Ludäscher, Richard Marciano, Reagan W. Moore:
Preservation of Digital Data with Self-Validating, Self-Instantiating Knowledge-Based Archives. SIGMOD Rec. 30(3): 54-63 (2001)
2000
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Reagan W. Moore, Chaitan Baru, Arcot Rajasekar, Bertram Ludäscher, Richard Marciano, Michael Wan, Wayne Schroeder, Amarnath Gupta:
Collection-Based Persistent Digital Archives - Part 1. D Lib Mag. 6(3) (2000)
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Andreas Paepcke, Robert Brandriff, Greg Janee, Ray R. Larson, Bertram Ludäscher, Sergey Melnik, Sriram Raghavan:
Search Middleware and the Simple Digital Library Interoperability Protocol. D Lib Mag. 6(3) (2000)
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Reagan W. Moore, Chaitan Baru, Arcot Rajasekar, Bertram Ludäscher, Richard Marciano, Michael Wan, Wayne Schroeder, Amarnath Gupta:
Collection-Based Persistent Digital Archives - Part 2. D Lib Mag. 6(4) (2000)
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Jörg Flum, Max Kubierschky, Bertram Ludäscher:
Games and total Datalog¬ queries. Theor. Comput. Sci. 239(2): 257-276 (2000)
1998
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Bertram Ludäscher:
Integration of Active and Deductive Database Rules (Abstract). Datenbank Rundbr. 22: 39 (1998)
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Bertram Ludäscher, Georg Lausen:
Handling Termination in a Logical Language for Active Rules. Informatica 9(1): 65-84 (1998)
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Bertram Ludäscher, Rainer Himmeröder, Georg Lausen, Wolfgang May, Christian Schlepphorst:
Managing Semistructured Data with FLORID: A Deductive Object-Oriented Perspective. Inf. Syst. 23(8): 589-613 (1998)

Conference and Workshop Papers

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2024
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Shawn Bowers, Yilin Xia, Bertram Ludäscher:
The Skeptic's Argumentation Game or: Well-Founded Explanations for Mere Mortals. SAFA@COMMA 2024: 104-118
[c152]
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Yilin Xia, Daphne Odekerken, Shawn Bowers, Bertram Ludäscher:
Layered Visualization of Argumentation Frameworks. COMMA 2024: 373-374
[c151]
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Evgeny S. Skvortsov, Yilin Xia, Shawn Bowers, Bertram Ludäscher:
The Logica System: Elevating SQL Databases to Declarative Data Science Engines. Datalog 2024: 69-73
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Evgeny S. Skvortsov, Yilin Xia, Bertram Ludäscher:
Logica: Declarative Data Science for Mere Mortals. EDBT 2024: 842-845
[c149]
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Shawn Bowers, Yilin Xia, Bertram Ludäscher:
On the Structure of Game Provenance and its Applications. EuroS&P Workshops 2024: 602-609
[c148]
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Evgeny S. Skvortsov, Yilin Xia, Shawn Bowers, Bertram Ludäscher:
From Logic Programming to Programming in Logica: A First-Course in Declarative Data Science & Engineering. ICLP Workshops 2024
2023
[c147]
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Bertram Ludäscher, Shawn Bowers, Yilin Xia:
Games, Queries, and Argumentation Frameworks: Towards a Family Reunion. AI³@AI*IA 2023
[c146]
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  - conf/www/ParulianL23
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Nikolaus Nova Parulian, Bertram Ludäscher:
Trust the Process: Analyzing Prospective Provenance for Data Cleaning. WWW (Companion Volume) 2023: 1513-1523
[c145]
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Tanja Auge, Gunnar Bali, Meike Klettke, Bertram Ludäscher, Wolfgang Söldner, Simon Weishäupl, Tilo Wettig:
Provenance for Lattice QCD workflows. WWW (Companion Volume) 2023: 1524-1530
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Seokki Lee, Boris Glavic, Adriane Chapman, Bertram Ludäscher:
Hybrid Query and Instance Explanations and Repairs. WWW (Companion Volume) 2023: 1559-1562
2022
[c143]
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Nikolaus Nova Parulian, Bertram Ludäscher:
DCM explorer: a tool to support transparent data cleaning through provenance exploration. TaPP 2022: 10:1-10:6
2021
[c142]
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Nikolaus Nova Parulian, Timothy M. McPhillips, Bertram Ludäscher:
A Model and System for Querying Provenance from Data Cleaning Workflows. IPAW 2021: 183-197
[c141]
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Timothy M. McPhillips, Thomas Thelen, Craig Willis, Kacper Kowalik, Matthew B. Jones, Bertram Ludäscher:
CPR-A Comprehensible Provenance Record for Verification Workflows in Whole Tale. IPAW 2021: 263-269
[c140]
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Nikolaus Nova Parulian, Bertram Ludäscher:
Towards Transparent Data Cleaning: The Data Cleaning Model Explorer (DCM/X). JCDL 2021: 326-327
[c139]
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George Alter, Jack Gager, Pascal Heus, Carson Hunter, Sanda Ionescu, Jeremy Iverson, H. V. Jagadish, Bertram Ludäscher, Jared Lyle, Timothy M. McPhillips, Alexander Mueller, Sigve Nordgaard, Ørnulf Risnes, Dan J. Smith, Jie Song, Thomas Thelen:
Detailed Provenance Metadata from Statistical Analysis Software: TaPP Applications Track. TaPP 2021
[c138]
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Tom Blount, Adriane Chapman, Michael A. C. Johnson, Bertram Ludäscher:
Observed vs. Possible Provenance (Research Track). TaPP 2021
2020
[c137]
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Yi-Yun Cheng, Bertram Ludäscher:
Through the magnifying glass: Exploring aggregations of COVID -19 datasets by county, state, and taxonomies of U.S. regions. ASIST 2020
[c136]
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Yi-Yun Cheng, Bertram Ludäscher:
Reconciling taxonomies of electoral constituencies and recognized tribes of indigenous Taiwan. ASIST 2020
[c135]
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Santiago Núñez Corrales, Lan Li, Bertram Ludäscher:
A First-Principles Algebraic Approach to Data Transformations in Data Cleaning: Understanding Provenance from the Ground Up. TaPP 2020
2019
[c134]
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Sahil Gupta, Yi-Yun Cheng, Bertram Ludäscher:
Possible Worlds Explorer: Datalog & Answer Set Programming for the Rest of Us. Datalog 2019: 44-55
[c133]
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Timothy M. McPhillips, Craig Willis, Michael R. Gryk, Santiago Núñez Corrales, Bertram Ludäscher:
Reproducibility by Other Means: Transparent Research Objects. eScience 2019: 502-509
[c132]
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Kyle Chard, Thomas Thelen, Matthew J. Turk, Craig Willis, Niall Gaffney, Matthew B. Jones, Kacper Kowalik, Bertram Ludäscher, Timothy M. McPhillips, Jarek Nabrzyski, Victoria Stodden, Ian J. Taylor:
Application of BagIt-Serialized Research Object Bundles for Packaging and Re-Execution of Computational Analyses. eScience 2019: 514-521
[c131]
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Kyle Chard, Niall Gaffney, Matthew B. Jones, Kacper Kowalik, Bertram Ludäscher, Jarek Nabrzyski, Victoria Stodden, Ian J. Taylor, Matthew J. Turk, Craig Willis:
Implementing Computational Reproducibility in the Whole Tale Environment. P-RECS@HPDC 2019: 17-22
[c130]
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Kyle Chard, Niall Gaffney, Mihael Hategan, Kacper Kowalik, Bertram Ludäscher, Timothy M. McPhillips, Jarek Nabrzyski, Victoria Stodden, Ian J. Taylor, Thomas Thelen, Matthew J. Turk, Craig Willis:
Toward Enabling Reproducibility for Data-Intensive Research Using the Whole Tale Platform. PARCO 2019: 766-778
[c129]
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Timothy M. McPhillips, Lan Li, Nikolaus Nova Parulian, Bertram Ludäscher:
Modeling Provenance and Understanding Reproducibility for OpenRefine Data Cleaning Workflows. TaPP 2019
2018
[c128]
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Yi-Yun Cheng, Bertram Ludäscher:
Full of Beans: A Study on the Alignment of Two Flowering Plants Classification Systems. NKOS@TPDL 2018: 53-63
[c127]
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Michael R. Gryk, Bertram Ludäscher:
Semantic Mediation to Improve Reproducibility for Biomolecular NMR Analysis. iConference 2018: 620-625
[c126]
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Shawn Bowers, Timothy M. McPhillips, Bertram Ludäscher:
Validation and Inference of Schema-Level Workflow Data-Dependency Annotations. IPAW 2018: 128-141
2017
[c125]
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Yi-Yun Cheng, Nico M. Franz, Jodi Schneider, Shizhuo Yu, Thomas Rodenhausen, Bertram Ludäscher:
Agreeing to disagree: Reconciling conflicting taxonomic views using a logic-based approach. ASIST 2017: 46-56
[c124]
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Seokki Lee, Sven Köhler, Bertram Ludäscher, Boris Glavic:
A SQL-Middleware Unifying Why and Why-Not Provenance for First-Order Queries. ICDE 2017: 485-496
[c123]
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Seokki Lee, Xing Niu, Bertram Ludäscher, Boris Glavic:
Integrating Approximate Summarization with Provenance Capture. TaPP 2017
2016
[c122]
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  - conf/ipaw/PimentelDMBKMBL16
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João Felipe Pimentel, Saumen C. Dey, Timothy M. McPhillips, Khalid Belhajjame, David Koop, Leonardo Murta, Vanessa Braganholo, Bertram Ludäscher:
Yin & Yang: Demonstrating Complementary Provenance from noWorkflow & YesWorkflow. IPAW 2016: 161-165
[c121]
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Seokki Lee, Sven Köhler, Bertram Ludäscher, Boris Glavic:
Implementing Unified Why- and Why-Not Provenance Through Games. IPAW 2016: 209-213
[c120]
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Yang Cao, Christopher Jones, Víctor Cuevas-Vicenttín, Matthew B. Jones, Bertram Ludäscher, Timothy M. McPhillips, Paolo Missier, Christopher R. Schwalm, Peter Slaughter, David Vieglais, Lauren Walker, Yaxing Wei:
DataONE: A Data Federation with Provenance Support. IPAW 2016: 230-234
2015
[c119]
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Tuan Dang, Nico M. Franz, Bertram Ludäscher, Angus Graeme Forbes:
ProvenanceMatrix: A Visualization Tool for Multi-taxonomy Alignments. VOILA@ISWC 2015: 13
[c118]
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Saumen C. Dey, Khalid Belhajjame, David Koop, Meghan Raul, Bertram Ludäscher:
Linking Prospective and Retrospective Provenance in Scripts. TaPP 2015
[c117]
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Boris Glavic, Sven Köhler, Sean Riddle, Bertram Ludäscher:
Towards Constraint-based Explanations for Answers and Non-Answers. TaPP 2015
[c116]
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Timothy M. McPhillips, Shawn Bowers, Khalid Belhajjame, Bertram Ludäscher:
Retrospective Provenance Without a Runtime Provenance Recorder. TaPP 2015
2014
[c115]
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Saumen C. Dey, Sven Köhler, Shawn Bowers, Bertram Ludäscher:
Computing Location-Based Lineage from Workflow Specifications to Optimize Provenance Queries. IPAW 2014: 180-193
[c114]
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Víctor Cuevas-Vicenttín, Bertram Ludäscher, Paolo Missier:
Provenance-Based Searching and Ranking for Scientific Workflows. IPAW 2014: 209-214
[c113]
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Tianhong Song, Saumen C. Dey, Shawn Bowers, Bertram Ludäscher:
Improving Workflow Design Using Abstract Provenance Graphs. IPAW 2014: 226-228
[c112]
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Víctor Cuevas-Vicenttín, Parisa Kianmajd, Bertram Ludäscher, Paolo Missier, Fernando Seabra Chirigati, Yaxing Wei, David Koop, Saumen C. Dey:
Provenance Storage, Querying, and Visualization in PBase. IPAW 2014: 239-241
[c111]
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Mingmin Chen, Shizhuo Yu, Parisa Kianmajd, Nico M. Franz, Shawn Bowers, Bertram Ludäscher:
Provenance for Explaining Taxonomy Alignments. IPAW 2014: 258-260
[c110]
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Mingmin Chen, Shizhuo Yu, Nico M. Franz, Shawn Bowers, Bertram Ludäscher:
A Hybrid Diagnosis Approach Combining Black-Box and White-Box Reasoning. RuleML 2014: 127-141
[c109]
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  - conf/sp/Sarkar0RLB14
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Anandarup Sarkar, Sven Köhler, Sean Riddle, Bertram Ludäscher, Matt Bishop:
Insider Attack Identification and Prevention Using a Declarative Approach. IEEE Symposium on Security and Privacy Workshops 2014: 265-276
[c108]
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Saumen C. Dey, Khalid Belhajjame, David Koop, Tianhong Song, Paolo Missier, Bertram Ludäscher:
UP & DOWN: Improving Provenance Precision by Combining Workflow- and Trace-Level Information. TAPP 2014
[c107]
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Sean Riddle, Sven Köhler, Bertram Ludäscher:
Towards Constraint Provenance Games. TAPP 2014
2013
[c106]
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  - conf/birthday/0003LZ13
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Sven Köhler, Bertram Ludäscher, Daniel Zinn:
First-Order Provenance Games. In Search of Elegance in the Theory and Practice of Computation 2013: 382-399
[c105]
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Saumen C. Dey, Bertram Ludäscher:
A declarative approach to customize workflow provenance. EDBT/ICDT Workshops 2013: 9-16
[c104]
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Saumen C. Dey, Víctor Cuevas-Vicenttín, Sven Köhler, Eric Gribkoff, Michael Wang, Bertram Ludäscher:
On implementing provenance-aware regular path queries with relational query engines. EDBT/ICDT Workshops 2013: 214-223
[c103]
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Saumen C. Dey, Sean Riddle, Bertram Ludäscher:
Provenance Analyzer: Exploring Provenance Semantics with Logic Rules. TaPP 2013
[c102]
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Paolo Missier, Saumen C. Dey, Khalid Belhajjame, Víctor Cuevas-Vicenttín, Bertram Ludäscher:
D-PROV: Extending the PROV Provenance Model with Workflow Structure. TaPP 2013
2012
[c101]
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  - conf/datalog/KohlerLS12
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Sven Köhler, Bertram Ludäscher, Yannis Smaragdakis:
Declarative Datalog Debugging for Mere Mortals. Datalog 2012: 111-122
[c100]
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Daniel Zinn, Todd J. Green, Bertram Ludäscher:
Win-move is coordination-free (sometimes). ICDT 2012: 99-113
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Shawn Bowers, Timothy M. McPhillips, Bertram Ludäscher:
Declarative Rules for Inferring Fine-Grained Data Provenance from Scientific Workflow Execution Traces. IPAW 2012: 82-96
[c98]
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Víctor Cuevas-Vicenttín, Saumen C. Dey, Michael Li Yuan Wang, Tianhong Song, Bertram Ludäscher:
Modeling and Querying Scientific Workflow Provenance in the D-OPM. SC Companion 2012: 119-128
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Manish Kumar Anand, Shawn Bowers, Bertram Ludäscher:
Database Support for Exploring Scientific Workflow Provenance Graphs. SSDBM 2012: 343-360
[c96]
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Saumen C. Dey, Sven Köhler, Shawn Bowers, Bertram Ludäscher:
Datalog as a Lingua Franca for Provenance Querying and Reasoning. TaPP 2012
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Lei Dou, G. Cao, Paul J. Morris, Robert A. Morris, Bertram Ludäscher, James A. Macklin, James Hanken:
Kurator: A Kepler Package for Data Curation Workflows. ICCS 2012: 1614-1619
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Sven Köhler, Supriya Gulati, Gongjing Cao, Quinn J. Hart, Bertram Ludäscher:
Sliding Window Calculations on Streaming Data using the Kepler Scientific Workflow System. ICCS 2012: 1639-1646
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Sven Köhler, Phillip Seitzer, Marc T. Facciotti, Bertram Ludäscher:
Improved Motif Detection in Large Sequence Sets with Random Sampling in a Kepler workflow. ICCS 2012: 1999
2011
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Daniel Zinn, Quinn J. Hart, Timothy M. McPhillips, Bertram Ludäscher, Yogesh Simmhan, Michail Giakkoupis, Viktor K. Prasanna:
Towards Reliable, Performant Workflows for Streaming-Applications on Cloud Platforms. CCGRID 2011: 235-244
[c91]
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Saumen C. Dey, Daniel Zinn, Bertram Ludäscher:
Reconciling Provenance Policy Conflicts by Inventing Anonymous Nodes. ESWC Workshops 2011: 172-185
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Lei Dou, Daniel Zinn, Timothy M. McPhillips, Sven Köhler, Sean Riddle, Shawn Bowers, Bertram Ludäscher:
Scientific workflow design 2.0: Demonstrating streaming data collections in Kepler. ICDE 2011: 1296-1299
[c89]
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Saumen C. Dey, Daniel Zinn, Bertram Ludäscher:
Repairing Provenance Policy Violations by Inventing Non-Functional Nodes. RED@ESWC 2011
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Sven Köhler, Sean Riddle, Daniel Zinn, Timothy M. McPhillips, Bertram Ludäscher:
Improving Workflow Fault Tolerance through Provenance-Based Recovery. SSDBM 2011: 207-224
[c87]
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Saumen C. Dey, Daniel Zinn, Bertram Ludäscher:
ProPub: Towards a Declarative Approach for Publishing Customized, Policy-Aware Provenance. SSDBM 2011: 225-243
2010
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Manish Kumar Anand, Shawn Bowers, Bertram Ludäscher:
Techniques for efficiently querying scientific workflow provenance graphs. EDBT 2010: 287-298
[c85]
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David Thau, Shawn Bowers, Bertram Ludäscher:
Towards best-effort merge of taxonomically organized data. ICDE Workshops 2010: 151-154
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Daniel Zinn, Shawn Bowers, Bertram Ludäscher:
XML-based computation for scientific workflows. ICDE 2010: 812-815
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Manish Kumar Anand, Shawn Bowers, Bertram Ludäscher:
Provenance browser: Displaying and querying scientific workflow provenance graphs. ICDE 2010: 1201-1204
[c82]
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Manish Kumar Anand, Shawn Bowers, Ilkay Altintas, Bertram Ludäscher:
Approaches for Exploring and Querying Scientific Workflow Provenance Graphs. IPAW 2010: 17-26
[c81]
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Ilkay Altintas, Manish Kumar Anand, Daniel Crawl, Shawn Bowers, Adam Belloum, Paolo Missier, Bertram Ludäscher, Carole A. Goble, Peter M. A. Sloot:
Understanding Collaborative Studies through Interoperable Workflow Provenance. IPAW 2010: 42-58
[c80]
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Daniel Zinn, Bertram Ludäscher:
Abstract Provenance Graphs: Anticipating and Exploiting Schema-Level Data Provenance. IPAW 2010: 206-215
2009
[c79]
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David Thau, Shawn Bowers, Bertram Ludäscher:
CleanTax: A Framework for Reasoning about Taxonomies. AAAI Spring Symposium: Benchmarking of Qualitative Spatial and Temporal Reasoning Systems 2009: 49-50
[c78]
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Bertram Ludäscher, Mathias Weske, Timothy M. McPhillips, Shawn Bowers:
Scientific Workflows: Business as Usual? BPM 2009: 31-47
[c77]
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Manish Kumar Anand, Shawn Bowers, Timothy M. McPhillips, Bertram Ludäscher:
Efficient provenance storage over nested data collections. EDBT 2009: 958-969
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Daniel Zinn, Shawn Bowers, Timothy M. McPhillips, Bertram Ludäscher:
X-CSR: Dataflow Optimization for Distributed XML Process Pipelines. ICDE 2009: 577-580
[c75]
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David Thau, Shawn Bowers, Bertram Ludäscher:
Merging Sets of Taxonomically Organized Data Using Concept Mappings under Uncertainty. OTM Conferences (2) 2009: 1103-1120
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Manish Kumar Anand, Shawn Bowers, Bertram Ludäscher:
A navigation model for exploring scientific workflow provenance graphs. SC-WORKS 2009
[c73]
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Daniel Zinn, Shawn Bowers, Timothy M. McPhillips, Bertram Ludäscher:
Scientific workflow design with data assembly lines. SC-WORKS 2009
[c72]
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Bertram Ludäscher:
What Makes Scientific Workflows Scientific?. SSDBM 2009: 217
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Manish Kumar Anand, Shawn Bowers, Timothy M. McPhillips, Bertram Ludäscher:
Exploring Scientific Workflow Provenance Using Hybrid Queries over Nested Data and Lineage Graphs. SSDBM 2009: 237-254
2008
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David Thau, Shawn Bowers, Bertram Ludäscher:
Merging taxonomies under RCC-5 algebraic articulations. ONISW 2008: 47-54
[c69]
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Shawn Bowers, Timothy M. McPhillips, Sean Riddle, Manish Kumar Anand, Bertram Ludäscher:
Kepler/pPOD: Scientific Workflow and Provenance Support for Assembling the Tree of Life. IPAW 2008: 70-77
2007
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Shawn Bowers, Timothy M. McPhillips, Martin Wu, Bertram Ludäscher:
Project Histories: Managing Data Provenance Across Collection-Oriented Scientific Workflow Runs. DILS 2007: 122-138
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Norbert Podhorszki, Bertram Ludäscher, Scott Klasky:
Workflow automation for processing plasma fusion simulation data. WORKS@HPDC 2007: 35-44
2006
[c66]
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Timothy M. McPhillips, Shawn Bowers, Bertram Ludäscher:
Collection-Oriented Scientific Workflows for Integrating and Analyzing Biological Data. DILS 2006: 248-263
[c65]
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Bertram Ludäscher, Shawn Bowers, Timothy M. McPhillips, Norbert Podhorszki:
Scientific Workflows: More e-Science Mileage from Cyberinfrastructure. e-Science 2006: 145
[c64]
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Shawn Bowers, Bertram Ludäscher:
A Calculus for Propagating Semantic Annotations Through Scientific Workflow Queries. EDBT Workshops 2006: 712-723
[c63]
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Shawn Bowers, Bertram Ludäscher, Anne H. H. Ngu, Terence Critchlow:
Enabling ScientificWorkflow Reuse through Structured Composition of Dataflow and Control-Flow. ICDE Workshops 2006: 70
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Scott Klasky, Bertram Ludäscher, Manish Parashar:
The Center for Plasma Edge Simulation Workflow Requirements. ICDE Workshops 2006: 73
[c61]
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Mladen A. Vouk, Ilkay Altintas, Roselyne Barreto, J. Blondin, Zhengang Cheng, Terence Critchlow, Ayla Khan, Scott Klasky, J. Ligon, Bertram Ludäscher, Pierre Mouallem, Steven G. Parker, Norbert Podhorszki, Arie Shoshani, Cláudio T. Silva:
Automation of Network-Based Scientific Workflows. Grid-Based Problem Solving Environments 2006: 35-61
[c60]
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Shawn Bowers, Timothy M. McPhillips, Bertram Ludäscher, Shirley Cohen, Susan B. Davidson:
A Model for User-Oriented Data Provenance in Pipelined Scientific Workflows. IPAW 2006: 133-147
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Ilkay Altintas, Bertram Ludäscher, Scott Klasky, Mladen A. Vouk:
S04 - Introduction to scientific workflow management and the Kepler system. SC 2006: 205
[c58]
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Carlos Rueda, Michael Gertz, Bertram Ludäscher, Bernd Hamann:
An Extensible Infrastructure for Processing Distributed Geospatial Data Streams. SSDBM 2006: 285-290
[c57]
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Ullas Nambiar, Bertram Ludäscher, Kai Lin, Chaitan Baru:
The GEON portal: accelerating knowledge discovery in the geosciences. WIDM 2006: 83-90
2005
[c56]
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William Michener, James Beach, Shawn Bowers, Laura L. Downey, Matthew B. Jones, Bertram Ludäscher, Deana Pennington, Arcot Rajasekar, Samantha Romanello, Mark Schildhauer, David Vieglais, Jianting Zhang:
Data Integration and Workflow Solutions for Ecology. DILS 2005: 321-324
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Shawn Bowers, Bertram Ludäscher:
Actor-Oriented Design of Scientific Workflows. ER 2005: 369-384
[c54]
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Jeffrey S. Grethe, Chaitan Baru, Amarnath Gupta, Mark James, Bertram Ludäscher, Maryann E. Martone, Philip M. Papadopoulos, Steven Peltier, Arcot Rajasekar, Simone Santini, Ilya Zaslavsky, Mark H. Ellisman:
Biomedical Informatics Research Network: Building a National Collaboratory to Hasten the Derivation of New Understanding and Treatment of Disease. HealthGrid 2005: 100-109
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Alin Deutsch, Bertram Ludäscher, Alan Nash:
Rewriting Queries Using Views with Access Patterns Under Integrity Constraints. ICDT 2005: 352-367
[c52]
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Samantha Romanello, James Beach, Shawn Bowers, Matthew B. Jones, Bertram Ludäscher, William Michener, Deana Pennington, Arcot Rajasekar, Mark Schildhauer:
Creating and Providing Data Management Services for the Biological and Ecological Sciences: Science Environment for Ecological Knowledge. SSDBM 2005: 28-31
[c51]
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Chad Berkley, Shawn Bowers, Matthew B. Jones, Bertram Ludäscher, Mark Schildhauer, Jing Tao:
Incorporating Semantics in Scientific Workflow Authoring. SSDBM 2005: 75-78
[c50]
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Efrat Jaeger, Ilkay Altintas, Jianting Zhang, Bertram Ludäscher, Deana Pennington, William Michener:
A Scientific Workflow Approach to Distributed Geospatial Data Processing using Web Services. SSDBM 2005: 87-90
[c49]
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Shawn Bowers, Bertram Ludäscher:
Towards Automatic Generation of Semantic Types in Scientific Workflows. WISE Workshops 2005: 207-216
2004
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Shawn Bowers, Bertram Ludäscher:
An Ontology-Driven Framework for Data Transformation in Scientific Workflows. DILS 2004: 1-16
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Alan Nash, Bertram Ludäscher:
Processing Unions of Conjunctive Queries with Negation under Limited Access Patterns. EDBT 2004: 422-440
[c46]
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Bertram Ludäscher, Alan Nash:
Web Service Composition Through Declarative Queries: The Case of Conjunctive Queries with Union and Negation. ICDE 2004: 840
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Ilkay Altintas, Efrat Jaeger, Kai Lin, Bertram Ludäscher, Ashraf Memon:
A Web Service Composition and Deployment Framework for Scientific Workflows. ICWS 2004: 814-
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Alan Nash, Bertram Ludäscher:
Processing First-Order Queries under Limited Access Patterns. PODS 2004: 307-318
[c43]
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Ilkay Altintas, Adam Birnbaum, Kim K. Baldridge, Wibke Sudholt, Mark A. Miller, Céline Amoreira, Yohann Potier, Bertram Ludäscher:
A Framework for the Design and Reuse of Grid Workflows. SAG 2004: 120-133
[c42]
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Shawn Bowers, David Thau, Rich Williams, Bertram Ludäscher:
Data Procurement for Enabling Scientific Workflows: On Exploring Inter-ant Parasitism. SWDB 2004: 57-63
[c41]
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Shawn Bowers, Kai Lin, Bertram Ludäscher:
On Integrating Scientific Resources through Semantic Registration. SSDBM 2004: 349-352
[c40]
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Ilkay Altintas, Chad Berkley, Efrat Jaeger, Matthew B. Jones, Bertram Ludäscher, Steve Mock:
Kepler: An Extensible System for Design and Execution of Scientific Workflows. SSDBM 2004: 423-424
2003
[c39]
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Monica Chagoyen, M. Erdem Kurul, Pedro A. de Alarcón, Simone Santini, Bertram Ludäscher, José María Carazo, Amarnath Gupta:
A Semantic Mediation Approach for Problems in Computational Molecular Biology. CSB 2003: 386-387
[c38]
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Amarnath Gupta, Bertram Ludäscher, Maryann E. Martone:
BIRN-M: A Semantic Mediator for Solving Real-World Neuroscience Problems. SIGMOD Conference 2003: 678
[c37]
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Ilkay Altintas, Sangeeta Bhagwanani, David Buttler, Sandeep Chandra, Zhengang Cheng, Matthew Coleman, Terence Critchlow, Amarnath Gupta, Wei Han, Ling Liu, Bertram Ludäscher, Calton Pu, Reagan W. Moore, Arie Shoshani, Mladen A. Vouk:
A Modeling and Execution Environment for Distributed Scientific Workflows. SSDBM 2003: 247-250
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Bertram Ludäscher, Ilkay Altintas, Amarnath Gupta:
Compiling Abstract Scientific Workflows into Web Service Workflows. SSDBM 2003: 251-254
2002
[c35]
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Amarnath Gupta, Bertram Ludäscher, Maryann E. Martone, Xufei Qian, Edward Ross, Joshua Tran, Ilya Zaslavsky:
A System for Managing Alternate Models in Model-Based Mediation. BNCOD 2002: 54-57
[c34]
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Xufei Qian, Bertram Ludäscher, Maryann E. Martone, Amarnath Gupta:
Navigating Virtual Information Sources with Know-ME. EDBT 2002: 739-741
[c33]
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Bertram Ludäscher, Ilkay Altintas, Amarnath Gupta:
Time to Leave the Trees: From Syntactic to Conceptual Querying of XML. EDBT Workshops 2002: 148-168
[c32]
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Richard Marciano, Bertram Ludäscher, Ilya Zaslavsky, Reagan W. Moore, Keith Pezzoli:
Multi-level Information Modeling and Preservation of eGOV Data. EGOV 2002: 93-100
[c31]
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Amarnath Gupta, Bertram Ludäscher, Maryann E. Martone:
Registering Scientific Information Sources for Semantic Mediation. ER 2002: 182-198
[c30]
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Amarnath Gupta, Bertram Ludäscher, Reagan W. Moore:
Ontology services for curriculum development in NSDL. JCDL 2002: 219-220
[c29]
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Bertram Ludäscher, Pratik Mukhopadhyay, Yannis Papakonstantinou:
A Transducer-Based XML Query Processor. VLDB 2002: 227-238
2001
[c28]
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Ilya Zaslavsky, Amarnath Gupta, Bertram Ludäscher, Shabbar Tambawala:
Query Evaluation and Presentation Planning within a Spatial Mediator: Extending XML-based Mediation to Heterogeneous Sources of GIS and Imagery Data (Invited Address). DEXA Workshop 2001: 853-855
[c27]
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Amarnath Gupta, Bertram Ludäscher, Maryann E. Martone:
An Extensible Model-Based Mediatior System with Domain Maps. ICDE Demo Sessions 2001
[c26]
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Bertram Ludäscher, Amarnath Gupta, Maryann E. Martone:
Model-Based Mediation with Domain Maps. ICDE 2001: 81-90
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Bertram Ludäscher, Richard Marciano, Reagan W. Moore:
Towards Self-Validating Knowledge-Based Archives. RIDE-DM 2001: 9-16
2000
[c24]
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Bertram Ludäscher, Yannis Papakonstantinou, Pavel E. Velikhov:
Navigation-Driven Evaluation of Virtual Mediated Views. EDBT 2000: 150-165
[c23]
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Amarnath Gupta, Bertram Ludäscher, Maryann E. Martone:
Knowledge-Based Integration of Neuroscience Data Sources. SSDBM 2000: 39-52
[c22]
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Bertram Ludäscher, Amarnath Gupta, Maryann E. Martone:
Model-Based Information Integration in a Neuroscience Mediator System. VLDB 2000: 639-642
1999
[c21]
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Chaitanya K. Baru, Vincent Chu, Amarnath Gupta, Bertram Ludäscher, Richard Marciano, Yannis Papakonstantinou, Pavel E. Velikhov:
XML-based Information Mediation for Digital Libraries. ACM DL 1999: 214-215
[c20]
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Bertram Ludäscher, Amarnath Gupta:
Modeling Interactive Web Sources for Information Mediation. ER (Workshops) 1999: 225-238
[c19]
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Wolfgang May, Rainer Himmeröder, Georg Lausen, Bertram Ludäscher:
A Unified Framework for Wrapping, Mediating and Restructuring Information from the Web. ER (Workshops) 1999: 307-320
[c18]
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Chaitanya K. Baru, Amarnath Gupta, Bertram Ludäscher, Richard Marciano, Yannis Papakonstantinou, Pavel E. Velikhov, Vincent Chu:
XML-Based Information Mediation with MIX. SIGMOD Conference 1999: 597-599
[c17]
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Bertram Ludäscher, Yannis Papakonstantinou, Pavel E. Velikhov:
A Framework for Navigation-Driven Lazy Mediators. WebDB (Informal Proceedings) 1999: 85-90
1998
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Georg Lausen, Bertram Ludäscher, Wolfgang May:
On Active Deductive Databases: The Statelog Approach. Transactions and Change in Logic Databases 1998: 69-106
[c15]
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Georg Lausen, Bertram Ludäscher, Wolfgang May:
On Logical Foundations of Active Databases. Logics for Databases and Information Systems 1998: 389-422
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Rainer Himmeröder, Paul-Thomas Kandzia, Bertram Ludäscher, Wolfgang May, Georg Lausen:
Search, Analysis, and Integration of Web Documents: A Case Study with FLORID. DDLP 1998: 47-58
[c13]
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Bertram Ludäscher, Wolfgang May:
Referential Actions: From Logical Semantics to Implementation. EDBT 1998: 404-418
[c12]
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Rainer Himmeröder, Bertram Ludäscher:
Querying the Web with FLORID. Grundlagen von Datenbanken 1998: 47-51
[c11]
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Chaitanya K. Baru, Bertram Ludäscher, Yannis Papakonstantinou, Pavel E. Velikhov, Victor Vianu:
Features and Requirements for an XML View Definition Language: Lessons from XML Information Mediation. QL 1998
1997
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Wolfgang May, Bertram Ludäscher, Georg Lausen:
Well-Founded Semantics for Deductive Object-Oriented Database Languages. DOOD 1997: 320-336
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Rainer Himmeröder, Georg Lausen, Bertram Ludäscher, Christian Schlepphorst:
On a Declarative Semantics for Web Queries. DOOD 1997: 386-398
[c8]
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Jörg Flum, Max Kubierschky, Bertram Ludäscher:
Total and Partial Well-Founded Datalog Coincide. ICDT 1997: 113-124
[c7]
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Bertram Ludäscher, Wolfgang May, Georg Lausen:
Referential Actions as Logic Rules. PODS 1997: 217-227
1996
[c6]
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Bertram Ludäscher, Wolfgang May, Joachim Reinert:
Towards a Logical Semantics for Referential Actions in SQL. FMLDO 1996: 57-72
[c5]
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Bertram Ludäscher, Wolfgang May, Georg Lausen:
Nested Transactions in a Logical Language for Active Rules. Logic in Databases 1996: 197-222
1995
[c4]
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Bertram Ludäscher, Ulrich Hamann, Georg Lausen:
A Logical Framework for Active Rules. COMAD 1995
[c3]
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Ulrich Hamann, Bertram Ludäscher:
Zustandsorientierte Beschreibung von Updates in deduktiven Datenbanken. Grundlagen von Datenbanken 1995: 58-62
1994
[c2]
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Georg Lausen, Bertram Ludäscher:
Updates by Reasoning about States. East/West Database Workshop 1994: 17-30
1992
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Joachim Posegga, Bertram Ludäscher:
Towards First-order Deduction Based on Shannon Graphs. GWAI 1992: 67-75

Parts in Books or Collections

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2009
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Bertram Ludäscher, Ilkay Altintas, Shawn Bowers, Julian Cummings, Terence Critchlow, Ewa Deelman, David De Roure, Juliana Freire, Carole A. Goble, Matthew B. Jones, Scott Klasky, Timothy M. McPhillips, Norbert Podhorszki, Cláudio T. Silva, Ian J. Taylor, Mladen A. Vouk:
Scientific Process Automation and Workflow Management. Scientific Data Management 2009
2007
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Deana D. Pennington, Dan Higgins, A. Townsend Peterson, Matthew B. Jones, Bertram Ludäscher, Shawn Bowers:
Ecological Niche Modeling Using the Kepler Workflow System. Workflows for e-Science, Scientific Workflows for Grids 2007: 91-108
2003
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Bertram Ludäscher, Amarnath Gupta, Maryann E. Martone:
A Model-Based Mediator System for Scientific Data Management. Bioinformatics 2003: 335-370

Editorship

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2015
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Bertram Ludäscher, Beth Plale:
Provenance and Annotation of Data and Processes - 5th International Provenance and Annotation Workshop, IPAW 2014, Cologne, Germany, June 9-13, 2014. Revised Selected Papers. Lecture Notes in Computer Science 8628, Springer 2015, ISBN 978-3-319-16461-8 [contents]
2014
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Adriane Chapman, Bertram Ludäscher, Andreas Schreiber:
6th Workshop on the Theory and Practice of Provenance, TaPP'14, Cologne, Germany, June 12-13, 2014. USENIX Association 2014 [contents]
2010
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Michael Gertz, Bertram Ludäscher:
Scientific and Statistical Database Management, 22nd International Conference, SSDBM 2010, Heidelberg, Germany, June 30 - July 2, 2010. Proceedings. Lecture Notes in Computer Science 6187, Springer 2010, ISBN 978-3-642-13817-1 [contents]
2008
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Bertram Ludäscher, Nikos Mamoulis:
Scientific and Statistical Database Management, 20th International Conference, SSDBM 2008, Hong Kong, China, July 9-11, 2008, Proceedings. Lecture Notes in Computer Science 5069, Springer 2008, ISBN 978-3-540-69476-2 [contents]
2005
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Bertram Ludäscher, Louiqa Raschid:
Data Integration in the Life Sciences, Second InternationalWorkshop, DILS 2005, San Diego, CA, USA, July 20-22, 2005, Proceedings. Lecture Notes in Computer Science 3615, Springer 2005, ISBN 3-540-27967-9 [contents]

Reference Works

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2018
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Bertram Ludäscher, Shawn Bowers, Timothy M. McPhillips:
Scientific Workflows. Encyclopedia of Database Systems (2nd ed.) 2018
2009
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Bertram Ludäscher, Shawn Bowers, Timothy M. McPhillips:
Scientific Workflows. Encyclopedia of Database Systems 2009: 2507-2511

Data and Artifacts

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2022
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R. Kyle Bocinsky, Andrew Gillreath-Brown, Keith Kintigh, Ann Kinzig, Tim Kohler, Allen Lee, Bertram Ludäscher, Timothy M. McPhillips, Christine Nguyen, Calvin Pritchard:
Synthesizing Knowledge of Past Environments (SKOPE) Web Application. Zenodo, 2022
[d1]
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R. Kyle Bocinsky, Andrew Gillreath-Brown, Keith Kintigh, Ann Kinzig, Tim Kohler, Allen Lee, Bertram Ludäscher, Timothy M. McPhillips, Christine Nguyen, Calvin Pritchard:
Synthesizing Knowledge of Past Environments (SKOPE) Web Application. Zenodo, 2022

Informal and Other Publications

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2024
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  - journals/corr/abs-2403-08257
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Yilin Xia, Shawn Bowers, Lan Li, Bertram Ludäscher:
Reconciling Conflicting Data Curation Actions: Transparency Through Argumentation. CoRR abs/2403.08257 (2024)
[i23]
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  - journals/corr/abs-2410-00218
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Lan Li, Liri Fang, Yiren Liu, Vetle I. Torvik, Bertram Ludäscher:
T-KAER: Transparency-enhanced Knowledge-Augmented Entity Resolution Framework. CoRR abs/2410.00218 (2024)
[i22]
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  - journals/corr/abs-2410-01946
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Zhiwen You, Kanyao Han, Haotian Zhu, Bertram Ludäscher, Jana Diesner:
SciPrompt: Knowledge-augmented Prompting for Fine-grained Categorization of Scientific Topics. CoRR abs/2410.01946 (2024)
2023
[i21]
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  - journals/corr/abs-2301-04770
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Liri Fang, Lan Li, Yiren Liu, Vetle I. Torvik, Bertram Ludäscher:
KAER: A Knowledge Augmented Pre-Trained Language Model for Entity Resolution. CoRR abs/2301.04770 (2023)
[i20]
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  - journals/corr/abs-2303-12640
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Tanja Auge, Gunnar Bali, Meike Klettke, Bertram Ludäscher, Wolfgang Söldner, Simon Weishäupl, Tilo Wettig:
Provenance for Lattice QCD workflows. CoRR abs/2303.12640 (2023)
[i19]
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  - journals/corr/abs-2309-06620
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Bertram Ludäscher, Yilin Xia:
Games and Argumentation: Time for a Family Reunion! CoRR abs/2309.06620 (2023)
[i18]
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  - journals/corr/abs-2310-05649
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Adelinde M. Uhrmacher, Peter I. Frazier, Reiner Hähnle, Franziska Klügl, Fabian Lorig, Bertram Ludäscher, Laura Nenzi, Cristina Ruiz Martin, Bernhard Rumpe, Claudia Szabo, Gabriel A. Wainer, Pia Wilsdorf:
Context, Composition, Automation, and Communication - The C2AC Roadmap for Modeling and Simulation. CoRR abs/2310.05649 (2023)
2021
[i17]
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  - journals/corr/abs-2103-09181
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Rafael Ferreira da Silva, Henri Casanova, Kyle Chard, Dan Laney, Dong H. Ahn, Shantenu Jha, Carole A. Goble, Lavanya Ramakrishnan, J. Luc Peterson, Bjoern Enders, Douglas Thain, Ilkay Altintas, Yadu N. Babuji, Rosa M. Badia, Vivien Bonazzi, Tainã Coleman, Michael R. Crusoe, Ewa Deelman, Frank Di Natale, Paolo Di Tommaso, Thomas Fahringer, Rosa Filgueira, Grigori Fursin, Alex Ganose, Björn A. Grüning, Daniel S. Katz, Olga A. Kuchar, Ana Kupresanin, Bertram Ludäscher, Ketan Maheshwari, Marta Mattoso, Kshitij Mehta, Todd S. Munson, Jonathan Ozik, Tom Peterka, Loic Pottier, Tim Randles, Stian Soiland-Reyes, Benjamín Tovar, Matteo Turilli, Thomas D. Uram, Karan Vahi, Michael Wilde, Matthew Wolf, Justin M. Wozniak:
Workflows Community Summit: Bringing the Scientific Workflows Community Together. CoRR abs/2103.09181 (2021)
[i16]
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  - journals/corr/abs-2106-05177
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Rafael Ferreira da Silva, Henri Casanova, Kyle Chard, Tainã Coleman, Dan Laney, Dong H. Ahn, Shantenu Jha, Dorran Howell, Stian Soiland-Reyes, Ilkay Altintas, Douglas Thain, Rosa Filgueira, Yadu N. Babuji, Rosa M. Badia, Bartosz Balis, Silvina Caíno-Lores, Scott Callaghan, Frederik Coppens, Michael R. Crusoe, Kaushik De, Frank Di Natale, Tu Mai Anh Do, Bjoern Enders, Thomas Fahringer, Anne Fouilloux, Grigori Fursin, Alban Gaignard, Alex Ganose, Daniel Garijo, Sandra Gesing, Carole A. Goble, Adil Hasan, Sebastiaan Huber, Daniel S. Katz, Ulf Leser, Douglas Lowe, Bertram Ludäscher, Ketan Maheshwari, Maciej Malawski, Rajiv Mayani, Kshitij Mehta, André Merzky, Todd S. Munson, Jonathan Ozik, Loïc Pottier, Sashko Ristov, Mehdi Roozmeh, Renan Souza, Frédéric Suter, Benjamín Tovar, Matteo Turilli, Karan Vahi, Alvaro Vidal-Torreira, Wendy R. Whitcup, Michael Wilde, Alan R. Williams, Matthew Wolf, Justin M. Wozniak:
Workflows Community Summit: Advancing the State-of-the-art of Scientific Workflows Management Systems Research and Development. CoRR abs/2106.05177 (2021)
[i15]
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  - journals/corr/abs-2112-08259
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Nikolaus Nova Parulian, Lan Li, Bertram Ludäscher:
or2yw: Modeling and Visualizing OpenRefineHistories as YesWorkflow Diagrams. CoRR abs/2112.08259 (2021)
2020
[i14]
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  - journals/corr/abs-2002-00084
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Seokki Lee, Bertram Ludäscher, Boris Glavic:
Approximate Summaries for Why and Why-not Provenance (Extended Version). CoRR abs/2002.00084 (2020)
[i13]
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  - journals/corr/abs-2005-06087
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Kyle Chard, Niall Gaffney, Mihael Hategan, Kacper Kowalik, Bertram Ludäscher, Timothy M. McPhillips, Jarek Nabrzyski, Victoria Stodden, Ian J. Taylor, Thomas Thelen, Matthew J. Turk, Craig Willis:
Toward Enabling Reproducibility for Data-Intensive Research using the Whole Tale Platform. CoRR abs/2005.06087 (2020)
2018
[i12]
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  - journals/corr/abs-1805-00400
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Adam Brinckman, Kyle Chard, Niall Gaffney, Mihael Hategan, Matthew B. Jones, Kacper Kowalik, Sivakumar Kulasekaran, Bertram Ludäscher, Bryce D. Mecum, Jarek Nabrzyski, Victoria Stodden, Ian J. Taylor, Matthew J. Turk, Kandace Turner:
Computing Environments for Reproducibility: Capturing the "Whole Tale". CoRR abs/1805.00400 (2018)
[i11]
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  - journals/corr/abs-1807-09899
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Shawn Bowers, Timothy M. McPhillips, Bertram Ludäscher:
Validation and Inference of Schema-Level Workflow Data-Dependency Annotations. CoRR abs/1807.09899 (2018)
[i10]
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  - journals/corr/abs-1808-05752
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Seokki Lee, Bertram Ludäscher, Boris Glavic:
PUG: A Framework and Practical Implementation for Why & Why-Not Provenance (extended version). CoRR abs/1808.05752 (2018)
2017
[i9]
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  - journals/corr/Lee0LG17
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Seokki Lee, Sven Köhler, Bertram Ludäscher, Boris Glavic:
Efficiently Computing Provenance Graphs for Queries with Negation. CoRR abs/1701.05699 (2017)
2016
[i8]
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  - journals/corr/LudascherCGJNST16
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Bertram Ludäscher, Kyle Chard, Niall Gaffney, Matthew B. Jones, Jaroslaw Nabrzyski, Victoria Stodden, Matthew J. Turk:
Capturing the "Whole Tale" of Computational Research: Reproducibility in Computing Environments. CoRR abs/1610.09958 (2016)
2015
[i7]
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  - journals/corr/McPhillipsSKABB15
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Timothy M. McPhillips, Tianhong Song, Tyler Kolisnik, Steve Aulenbach, Khalid Belhajjame, R. Kyle Bocinsky, Yang Cao, Fernando Chirigati, Saumen C. Dey, Juliana Freire, Deborah N. Huntzinger, Christopher Jones, David Koop, Paolo Missier, Mark Schildhauer, Christopher R. Schwalm, Yaxing Wei, James Cheney, Mark Bieda, Bertram Ludäscher:
YesWorkflow: A User-Oriented, Language-Independent Tool for Recovering Workflow Information from Scripts. CoRR abs/1502.02403 (2015)
2014
[i6]
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  - journals/corr/ChenYFBL14
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Mingmin Chen, Shizhuo Yu, Nico M. Franz, Shawn Bowers, Bertram Ludäscher:
Euler/X: A Toolkit for Logic-based Taxonomy Integration. CoRR abs/1402.1992 (2014)
2013
[i5]
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  - journals/corr/0003LZ13
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Sven Köhler, Bertram Ludäscher, Daniel Zinn:
First-Order Provenance Games. CoRR abs/1309.2655 (2013)
[i4]
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  - journals/corr/Cuevas-VicenttinD0RL13
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Víctor Cuevas-Vicenttín, Saumen C. Dey, Sven Köhler, Sean Riddle, Bertram Ludäscher:
Scientific Workflows and Provenance: Introduction and Research Opportunities. CoRR abs/1311.4610 (2013)
[i3]
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  - journals/corr/ZinnGL13
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Daniel Zinn, Todd J. Green, Bertram Ludäscher:
Win-Move is Coordination-Free (Sometimes). CoRR abs/1312.2919 (2013)
2012
[i2]
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  - journals/dagstuhl-reports/CheneyFLV12
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James Cheney, Anthony Finkelstein, Bertram Ludäscher, Stijn Vansummeren:
Principles of Provenance (Dagstuhl Seminar 12091). Dagstuhl Reports 2(2): 84-113 (2012)
2005
[i1]
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Bertram Ludäscher:
Scientific Workflow and Semantic Grid - Presentation. Semantic Grid 2005

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