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ORCIDZoé Lacroix
Person information
- affiliation: Arizona State University, Tempe, Arizona, USA
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2010 – 2019
- 2018
[j23]Paula Milan Rodriguez, Dirk Stratmann, Elodie Duprat
, Nikolaos Papandreou, Ruben Acuña, Zoé Lacroix, Jacques Chomilier:
Correlating topology and thermodynamics to predict protein structure sensitivity to point mutations. Bio Algorithms Med Syst. 14(3) (2018)- [r6]Zoé Lacroix:
Query Languages for the Life Sciences. Encyclopedia of Database Systems (2nd ed.) 2018 - [r5]Zoé Lacroix, Cartik R. Kothari, Peter Mork, Rami Rifaieh, Mark D. Wilkinson, Juliana Freire, Sarah Cohen Boulakia:
Biological Resource Discovery. Encyclopedia of Database Systems (2nd ed.) 2018 - [r4]Zoé Lacroix, Cartik R. Kothari, Peter Mork, Mark D. Wilkinson, Sarah Cohen Boulakia:
Biological Metadata Management. Encyclopedia of Database Systems (2nd ed.) 2018 - 2016
- [c76]Ruben Acuña, Zoé Lacroix:
Extracting Semantics from Legacy Scientific Workflows. ICSC 2016: 9-16 - 2015
- [j22]Ruben Acuña, Jacques Chomilier, Zoé Lacroix:
Managing and Documenting Legacy Scientific Workflows. J. Integr. Bioinform. 12(3) (2015) - [c75]Ruben Acuña, Zoé Lacroix, Rida A. Bazzi:
Instrumentation and Trace Analysis for Ad-Hoc Python Workflows in Cloud Environments. CLOUD 2015: 114-121 - 2014
- [j21]Ruben Acuña, Zoé Lacroix, Nikolaos Papandreou, Jacques Chomilier:
Protein intrachain contact prediction with most interacting residues (MIR). Bio Algorithms Med Syst. 10(4): 227-242 (2014) - 2013
- [c74]Ruben Acuña, Zoé Lacroix, Jacques Chomilier:
A Workflow for the Prediction of the Effects of Residue Substitution on Protein Stability. PRIB 2013: 253-264 - [e7]Zoé Lacroix, Edna Ruckhaus, Maria-Esther Vidal:
Resource Discovery - 5th International Workshop, RED 2012, Co-located with the 9th Extended Semantic Web Conference, ESWC 2012, Heraklion, Greece, May 27, 2012, Revised Selected Papers. Lecture Notes in Computer Science 8194, Springer 2013, ISBN 978-3-642-45262-8 [contents] - 2012
- [c73]Ruben Acuña, Zoé Lacroix, Fayez Hadji, Jacques Chomilier, Nikolaos Papandreou:
Prediction of Chimeric Protein Fold. BIOINFORMATICS 2012: 234-239 - [c72]Ruben Acuña, Zoé Lacroix, Jacques Chomilier:
Refurbishing Legacy Biological Workflows SPROUTS Case Study. SERVICES 2012: 41-49 - [e6]Zoé Lacroix, Maria-Esther Vidal:
Resource Discovery - Third International Workshop, RED 2010, Paris, France, November 5, 2010, Revised Selected Papers. Lecture Notes in Computer Science 6799, Springer 2012, ISBN 978-3-642-27391-9 [contents] - 2011
- [j20]Lakshminarayan Ravichandran, Antonia Papandreou-Suppappola, Andreas Spanias, Zoé Lacroix, Christophe Legendre:
Waveform Mapping and Time-Frequency Processing of DNA and Protein Sequences. IEEE Trans. Signal Process. 59(9): 4210-4224 (2011) - [e5]Maria-Esther Vidal, Edna Ruckhaus, Zoé Lacroix:
Proceedings of the Fourth International Workshop on REsource Discovery, RED@ESWC 2011, Heraklion, Greece, May 30, 2011. CEUR Workshop Proceedings 737, CEUR-WS.org 2011 [contents] - 2010
- [j19]Zoé Lacroix, Maliha Aziz:
Resource descriptions, ontology, and resource discovery. Int. J. Metadata Semant. Ontologies 5(3): 194-207 (2010) - [c71]Lakshminarayan Ravichandran, Antonia Papandreou-Suppappola, Andreas Spanias, Zoé Lacroix, Christophe Legendre:
Time-frequency based biological sequence querying. ICASSP 2010: 4174-4177 - [c70]Edouard Strauser, Mikaël Naveau, Hervé Ménager, Julien Maupetit, Zoé Lacroix, Pierre Tufféry:
Semantic Map for Structural Bioinformatics: Enhanced Service Discovery Based on High Level Concept Ontology. RED 2010: 57-70 - [c69]Rida A. Bazzi, Jeffrey M. Kiefer, Zoé Lacroix:
A User-Centric Classification of Tools for Biological Resource Discovery and Integration on the Web. RED 2010: 71-87 - [c68]Gaïane Hochard, Zoé Lacroix, Jordi Creus Tomàs, Bernd Amann:
A Semantic Map of RSS Feeds to Support Discovery. RED 2010: 122-133 - [c67]Bernd Amann, Laure Berti-Équille, Zoé Lacroix, Maria-Esther Vidal:
Challenges of Quality-Driven Resource Discovery. RED 2010: 181-189 - [e4]Zoé Lacroix:
Resource Discovery, Second International Workshop, RED 2009, Lyon, France, August 28, 2009. Revised Papers. Lecture Notes in Computer Science 6162, Springer 2010, ISBN 978-3-642-14414-1 [contents]
2000 – 2009
- 2009
- [j18]Mathieu Lonquety, Zoé Lacroix, Nikolaos Papandreou, Jacques Chomilier:
SPROUTS: a database for the evaluation of protein stability upon point mutation. Nucleic Acids Res. 37(Database-Issue): 374-379 (2009) - [j17]Zoé Lacroix, Christophe Legendre, Spyro Mousses:
Storing Scientific Workflows in a Database. Proc. VLDB Endow. 2(2): 1474-1480 (2009) - [c66]Zoé Lacroix, Maria-Esther Vidal, Christophe Legendre:
Customized and Optimized Service Selection with ProtocolDB. Globe 2009: 112-123 - [c65]Zoé Lacroix, Christophe Legendre, Sükrü Tüzmen:
Reasoning on Scientific Workflows. SERVICES I 2009: 306-313 - [c64]Zoé Lacroix, Spyro Mousses:
ProtocolDB: A Semantic Workflow Solution for Innovative Translational Research. SERVICES I 2009: 459-460 - [r3]Zoé Lacroix, Cartik R. Kothari, Peter Mork, Mark D. Wilkinson, Sarah Cohen Boulakia:
Biological Metadata Management. Encyclopedia of Database Systems 2009: 215-219 - [r2]Zoé Lacroix, Cartik R. Kothari, Peter Mork, Rami Rifaieh, Mark D. Wilkinson, Juliana Freire, Sarah Cohen Boulakia:
Biological Resource Discovery. Encyclopedia of Database Systems 2009: 220-223 - [r1]Zoé Lacroix:
Query Languages for the Life Sciences. Encyclopedia of Database Systems 2009: 2264-2268 - 2008
- [j16]Zoé Lacroix, Christophe Legendre:
BIPASS: Design of alternative splicing services. Int. J. Comput. Biol. Drug Des. 1(2): 200-217 (2008) - [c63]Maliha Aziz, Zoé Lacroix:
ProtocolDB: classifying resources with a domain ontology to support discovery. iiWAS 2008: 462-469 - [c62]Nadia Yacoubi Ayadi, Zoé Lacroix, Maria-Esther Vidal:
BiOnMap: a deductive approach for resource discovery. iiWAS 2008: 477-482 - [c61]Nadia Yacoubi Ayadi, Zoé Lacroix, Maria-Esther Vidal:
A Deductive Approach for Resource Interoperability and Well-Defined Workflows. OTM Workshops 2008: 998-1009 - [c60]Mathieu Lonquety, Zoé Lacroix, Jacques Chomilier:
Evaluation of the Stability of Folding Nucleus upon Mutation. PRIB 2008: 54-65 - 2007
- [j15]Zoé Lacroix, Christophe Legendre, Louiqa Raschid, Ben Snyder:
BIPASS: BioInformatics Pipeline Alternative Splicing Services. Nucleic Acids Res. 35(Web-Server-Issue): 292-296 (2007) - [c59]Hervé Ménager, Zoé Lacroix, Pierre Tufféry:
Bioinformatics Services Discovery Using Ontology Classification. IEEE SCW 2007: 106-113 - [c58]Zoé Lacroix, Christophe Legendre:
Analysis of a Scientific Protocol: Selecting Suitable Resources. IEEE SCW 2007: 130-137 - [c57]Nadia Yacoubi Ayadi, Zoé Lacroix:
Resolving Scientific Service Interoperability With Schema Mapping. BIBE 2007: 448-455 - [c56]Michel A. Kinsy, Zoé Lacroix:
Storing Efficiently Bioinformatics Workflows. BIBE 2007: 1328-1332 - [c55]Asaad F. Said, Lina J. Karam, Michael E. Berens, Zoé Lacroix, Rosemary A. Renaut:
Migration and Proliferation Analysis for Bladder Cancer Cells. ISBI 2007: 320-323 - [c54]Nadia Yacoubi Ayadi, Zoé Lacroix, Maria-Esther Vidal, Edna Ruckhaus:
Deductive Web Services: An Ontology-Driven Approach for Service Interoperability in Life Science. OTM Workshops (2) 2007: 1338-1347 - [c53]Michel A. Kinsy, Zoé Lacroix, Christophe Legendre, Piotr Wlodarczyk, Nadia Yacoubi Ayadi:
ProtocolDB: Storing Scientific Protocols with a Domain Ontology. WISE Workshops 2007: 17-28 - 2006
- [j14]Sarah Cohen Boulakia, Susan B. Davidson, Christine Froidevaux, Zoé Lacroix, Maria-Esther Vidal:
Path-based Systems to Guide Scientists in the Maze of Biological Data Sources. J. Bioinform. Comput. Biol. 4(5): 1069-1096 (2006) - [c52]Zoé Lacroix, Louiqa Raschid, Maria-Esther Vidal:
Semantic Model to Integrate Biological Resources. ICDE Workshops 2006: 63 - [c51]Barbara A. Eckman, Terry Gaasterland, Zoé Lacroix, Louiqa Raschid, Ben Snyder, Maria-Esther Vidal:
Implementing a Bioinformatics Pipeline (BIP) on a Mediator Platform: Comparing Cost and Quality of Alternate Choices. ICDE Workshops 2006: 67 - [c50]Hervé Ménager, Zoé Lacroix:
A Workflow Engine for the Execution of Scientific Protocols. ICDE Workshops 2006: 68 - [c49]Natalia Kwasnikowska, Yi Chen, Zoé Lacroix:
Modeling and Storing Scientific Protocols. OTM Workshops (1) 2006: 730-739 - [c48]Pierre Tufféry, Zoé Lacroix, Hervé Ménager:
Semantic Map of Services for Structural Bioinformatics. SSDBM 2006: 217-224 - 2005
- [j13]Stéphane Bressan, Barbara Catania, Zoé Lacroix, Ying Guang Li, Anna Maddalena:
Accelerating queries by pruning XML documents. Data Knowl. Eng. 54(2): 211-240 (2005) - [c47]Zoé Lacroix, Sumedha Gholba, Hervé Ménager:
BioMap: Discovering Schema Mapping Using Ontologies. CSB Workshops 2005: 118-119 - [c46]Zoé Lacroix, Kaushal Parekh, Maria-Esther Vidal, Marelis Cardenas, Natalia Marquez, Louiqa Raschid:
BioNavigation: Using Ontologies to Express Meaningful Navigational Queries Over Biological Resources. CSB Workshops 2005: 137-138 - [c45]Christian Beaudry, Michael E. Berens, Tarek A. El Doker, Anna M. Joy, Lina J. Karam, Zoé Lacroix, Jad A. Lutfi, Sai Motoru:
Automated Characterization of cellular migration phenomena. CSB Workshops 2005: 185-186 - [c44]Zoé Lacroix, Kaushal Parekh, Maria-Esther Vidal, Marelis Cardenas, Natalia Marquez:
BioNavigation: Selecting Optimum Paths Through Biological Resources to Evaluate Ontological Navigational Queries. DILS 2005: 275-283 - [c43]Zoé Lacroix, Hervé Ménager:
SemanticBio: Building Conceptual Scientific Workflows over Web Services. DILS 2005: 296-299 - 2004
- [j12]Zoé Lacroix, Louiqa Raschid, Barbara A. Eckman:
Techniques for Optimization of Queries on Integrated Biological Resources. J. Bioinform. Comput. Biol. 2(2): 375-412 (2004) - [j11]Jens Bleiholder, Zoé Lacroix, Hyma Murthy, Felix Naumann, Louiqa Raschid, Maria-Esther Vidal:
BioFast: Challenges in Exploring Linked Life Science Sources. SIGMOD Rec. 33(2): 72-77 (2004) - [j10]Dave Hislop, Zoé Lacroix, Gerald Moeller:
Issues in Mechanical Engineering Design Management. SIGMOD Rec. 33(2): 135-138 (2004) - [c42]Zoé Lacroix, Kaushal Parekh, Hasan Davulcu, I. V. Ramakrishnan, Nikeeta Julasana:
Automating the Biological Data Collection Process with Agents. CSB 2004: 489-490 - [c41]Zoé Lacroix, Kaushal Parekh, Louiqa Raschid, Maria-Esther Vidal:
Navigating through the Biological Maze. CSB 2004: 594-595 - [c40]Zoé Lacroix, Vidyadhari Edupuganti:
How Biological Source Capabilities May Affect the Data Collection Process. CSB 2004: 596-597 - [c39]Zoé Lacroix, Kaushal Parekh, Maria-Esther Vidal:
Evaluation Paths to Express Scientific Queries. DEXA Workshops 2004: 371-375 - [c38]Hasan Davulcu, Zoé Lacroix, Kaushal Parekh, I. V. Ramakrishnan, Nikeeta Julasana:
Exploiting Agent and Database Technologies for Biological Data Collection. DEXA Workshops 2004: 376-381 - [c37]Zoé Lacroix, Louiqa Raschid, Maria-Esther Vidal:
Efficient Techniques to Explore and Rank Paths in Life Science Data Sources. DILS 2004: 187-202 - [c36]Zoé Lacroix, Hyma Murthy, Felix Naumann, Louiqa Raschid:
Links and Paths through Life Sciences Data Sources. DILS 2004: 203-211 - [c35]Stéphane Bressan, Zoé Lacroix, Ying Guang Li, Anna Maddalena:
Prune XML Before You Search It: XML Transformations for Query Optimization. EDBT Workshops 2004: 270-279 - [c34]Omar Boucelma, Mehdi Essid, Zoé Lacroix, Julien Vinel, Jean-Yves Garinet, Abdelkader Bétari:
VirGIS: Mediation for Geographical Information Systems. ICDE 2004: 855 - [c33]Zoé Lacroix, Tiffany Morris, Kaushal Parekh, Louiqa Raschid, Maria-Esther Vidal:
Exploiting Multiple Paths to Express Scientific Queries. SSDBM 2004: 357-360 - 2003
- [j9]Zoé Lacroix:
Web data retrieval and extraction. Data Knowl. Eng. 44(3): 347-367 (2003) - [j8]Zoé Lacroix:
Designing Efficient User-Friendly Biological Data Management Systems. OMICS 7(1): 113-116 (2003) - [j7]Zoé Lacroix, Omar Boucelma:
Report on the First International Workshop an Efficient Web-based Information Systems. SIGMOD Rec. 32(1): 64-68 (2003) - [c32]Omar Boucelma, Jean-Yves Garinet, Zoé Lacroix:
The virGIS WFS-based spatial mediation system. CIKM 2003: 370-374 - [c31]Barbara A. Eckman, Kerry Deutsch, Marta Janer, Zoé Lacroix, Louiqa Raschid:
A Query Language to Support Scientific Discovery. CSB 2003: 388-391 - [c30]Zoé Lacroix, Felix Naumann, Louiqa Raschid, Maria-Esther Vidal:
Exploring Life Sciences Data Sources. IIWeb 2003: 203-208 - [c29]Mehdi Essid, Abdelkader Bétari, Omar Boucelma, Zoé Lacroix:
Intégration des Systèmes d'Information Géo-graphique. INFORSID 2003: 269-280 - [c28]Zoé Lacroix:
Reusing Mechanical Engineering Designs. IRI 2003: 299-304 - [c27]Zoé Lacroix, Omar Boucelma, Mehdi Essid:
The biological integration system. WIDM 2003: 45-49 - [p4]Zoé Lacroix, Terence Critchlow:
Introduction. Bioinformatics 2003: 1-10 - [p3]Zoé Lacroix:
Issues to Address While Designing a Biological Information System. Bioinformatics 2003: 75-108 - [p2]Zoé Lacroix, Terence Critchlow:
Compared Evaluation of Scientific Data Management Systems. Bioinformatics 2003: 371-391 - [e3]Zoé Lacroix, Terence Critchlow:
Bioinformatics. The Morgan Kaufmann series in multimedia information and systems, Elsevier 2003, ISBN 978-1-55860-829-0 [contents] - [e2]Stéphane Bressan, Akmal B. Chaudhri, Mong-Li Lee, Jeffrey Xu Yu, Zoé Lacroix:
Efficiency and Effectiveness of XML Tools and Techniques and Data Integration over the Web, VLDB 2002 Workshop EEXTT and CAiSE 2002 Workshop DTWeb. Revised Papers. Lecture Notes in Computer Science 2590, Springer 2003, ISBN 3-540-00736-9 [contents] - 2002
- [j6]Ullas Nambiar, Zoé Lacroix, Stéphane Bressan, Mong-Li Lee, Ying Guang Li:
Current Approaches to XML Management. IEEE Internet Comput. 6(4): 43-51 (2002) - [j5]Omar Boucelma, Silvana Castano, Carole A. Goble, Vanja Josifovski, Zoé Lacroix, Bertram Ludäscher:
Report on the EDBT'02 Panel on Scientific Data Integration. SIGMOD Rec. 31(4): 107-112 (2002) - [j4]Zoé Lacroix:
Biological data integration: wrapping data and tools. IEEE Trans. Inf. Technol. Biomed. 6(2): 123-128 (2002) - [c26]Joshua D. Summers, Zoé Lacroix, Jami J. Shah:
Case-Based Design Facilitated by the Design Exemplar. AID 2002: 453-476 - [c25]Zoé Lacroix, M. Tamer Özsu, Joe Wigglesworth, Louiqa Raschid, Anthony Tomasic:
Using standards for Data Integration over the Web (Panel). DIWeb 2002: 143-145 - [c24]Ullas Nambiar, Zoé Lacroix, Stéphane Bressan, Mong-Li Lee, Ying Guang Li:
Efficient XML Data Management: An Analysis. EC-Web 2002: 87-98 - [c23]Stéphane Bressan, Mong-Li Lee, Ying Guang Li, Zoé Lacroix, Ullas Nambiar:
The XOO7 Benchmark. EEXTT 2002: 146-147 - [c22]Omar Boucelma, Mehdi Essid, Zoé Lacroix, Abdelkader Bétari:
Exploiting and Completing Web Data Sources Capabilities. EEXTT 2002: 241-258 - [c21]Omar Boucelma, Mehdi Essid, Zoé Lacroix:
A WFS-based mediation system for GIS interoperability. ACM-GIS 2002: 23-28 - [c20]Barbara Catania, Zoé Lacroix:
Querying Design Data in a Constraint Database. Multimedia Information Systems 2002: 136-145 - [c19]Omar Boucelma, Zoé Lacroix:
Efficient Web-Based Information Systems. OOIS Workshops 2002: 152-153 - [e1]Zoé Lacroix:
Second International Workshop on Data Integration over the Web, DiWeb 2002, in conjunction with the Fourteenth International Conference on Advanced Information Systems Engineering (CAiSE) 2002, May 28, 2002, Toronto, Canada. University of Toronto Press 2002 [contents] - 2001
- [j3]Omar Boucelma, Zoé Lacroix:
InterMed: interface de me'diation pour les systèmes d'information. Ingénierie des Systèmes d Inf. 6(3): 33-60 (2001) - [c18]Barbara A. Eckman, Zoé Lacroix, Louiqa Raschid:
Optimized Seamless Integration of Biomolecular Data. BIBE 2001: 23-32 - [c17]Stéphane Bressan, Gillian Dobbie, Zoé Lacroix, Mong-Li Lee, Ying Guang Li, Ullas Nambiar, Bimlesh Wadhwa:
X007: Applying 007 Benchmark to XML Query Processing Tool. CIKM 2001: 167-174 - [c16]Zoé Lacroix:
Building Portals for E-Biology. DEXA Workshop 2001: 41-49 - [c15]Zoé Lacroix:
From Browsing to Querying the Web. DIWeb 2001: 1 - [c14]Zoé Lacroix:
Retrieving and Extracting Web Data with Search Views and an XML engine. DIWeb 2001: 76-90 - 2000
- [c13]Zoé Lacroix:
Scientific Data Integration: Wrapping Textual Documents with a Database View Mechanism and an XML Engine. BIBE 2000: 71-76 - [c12]Zoé Lacroix:
Querying Annotated Scientific Data Combining Object-Oriented View and Information Retrieval. RIAO 2000: 160-169 - [p1]Stéphane Grumbach, Zoé Lacroix, Philippe Rigaux, Luc Segoufin:
Optimization Techniques. Constraint Databases 2000: 319-334
1990 – 1999
- 1999
- [c11]Zoé Lacroix:
Non-Materialized Object Views of Web Datasources. WOWS 1999: 71-75 - [c10]Zoé Lacroix:
Object Views through Search Views of Web Datasources. ER 1999: 176-187 - 1998
- [j2]Zoé Lacroix, Claude Delobel, Philippe Brèche:
Object Views. Netw. Inf. Syst. J. 1(2-3): 231-250 (1998) - [c9]Zoé Lacroix, Arnaud Sahuguet, Raman Chandrasekar:
Information Extraction and Database Techniques: A User-Oriented Approach to Querying the Web. CAiSE 1998: 289-304 - [c8]Zoé Lacroix, Arnaud Sahuguet, Raman Chandrasekar:
User-oriented smart-cache for the Web: What You Seek is What You Get! SIGMOD Conference 1998: 572-574 - 1997
- [j1]Stéphane Grumbach, Zoé Lacroix:
On Non-Determinism in Machines and Languages. Ann. Math. Artif. Intell. 19(1-2): 169-213 (1997) - [c7]Zoé Lacroix, Claude Delobel, Philippe Brèche:
Object Views Constructed with an Object Algebra. BDA 1997 - [c6]Peter Haunold, Stéphane Grumbach, Gabriel M. Kuper, Zoé Lacroix:
Linear Constraints: Geometric Objects Represented by Inequalities. COSIT 1997: 429-440 - [c5]Zoé Lacroix, Claude Delobel, Philippe Brèche:
Object Views and Database Restructuring. DBPL 1997: 180-201 - 1995
- [c4]Stéphane Grumbach, Zoé Lacroix:
Computing Queries on Linear Constraint Databases. BDA 1995: 103- - [c3]Stéphane Grumbach, Zoé Lacroix, Steven Lindell:
Generalized Implicit Definitions on Finite Structures. CSL 1995: 252-265 - [c2]Stéphane Grumbach, Zoé Lacroix:
Computing Queries on Linear Constraint Databases. DBPL 1995: 11 - 1993
- [c1]Zoé Lacroix:
Les Relations Implicites et Leur Calcul. BDA 1993: 99-118
Coauthor Index
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