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2020 – today
- 2024
[c110]Thanh Son Phung
, Colin Thomas, Logan T. Ward, Kyle Chard, Douglas Thain:
Accelerating Function-Centric Applications by Discovering, Distributing, and Retaining Reusable Context in Workflow Systems. HPDC 2024: 122-134- [c109]Thanh Son Phung, Douglas Thain:
Adaptive Task-Oriented Resource Allocation for Large Dynamic Workflows on Opportunistic Resources. IPDPS 2024: 300-311 - [c108]Barry Sly-Delgado, Ben Tovar, Jin Zhou, Douglas Thain:
Reshaping High Energy Physics Applications for Near-Interactive Execution Using TaskVine. SC 2024: 62 - [c107]Md Saiful Islam, Douglas Thain:
Shepherd: Seamless Integration of Service Workflows into Task-Based Workflows through Log Monitoring. SC Workshops 2024: 2080-2087 - 2023
- [j34]Sandra Gesing, Ewa Deelman, Michael D. Hildreth, Ramandeep Makhija, Mary Ann McDowell, Natalie K. Meyers, Douglas Thain:
VisDict: Improving Communication Via a Visual Dictionary in a Science Gateway. Comput. Sci. Eng. 25(2): 7-11 (2023) - [j33]Tim Shaffer, Thanh Son Phung, Kyle Chard, Douglas Thain:
Landlord: Coordinating Dynamic Software Environments to Reduce Container Sprawl. IEEE Trans. Parallel Distributed Syst. 34(5): 1376-1389 (2023) - [c106]David Simonetti, Ben Tovar, Douglas Thain:
Mixed Modality Workflows in TaskVine. HPDC 2023: 331-332 - [c105]Thanh Son Phung, Ben Clifford, Kyle Chard, Douglas Thain:
Maximizing Data Utility for HPC Python Workflow Execution. SC Workshops 2023: 636-640 - [c104]Barry Sly-Delgado, Thanh Son Phung, Colin Thomas, David Simonetti, Andrew Hennessee, Ben Tovar, Douglas Thain:
TaskVine: Managing In-Cluster Storage for High-Throughput Data Intensive Workflows. SC Workshops 2023: 1978-1988 - 2022
- [c103]Ben Lyons, Douglas Thain:
Robust Meta-Workflow Management with Mufasa. e-Science 2022: 411-412 - [c102]Barry Sly-Delgado, Nick Locascio, David Simonetti, Brett Wiseman, Ben Tovar, Douglas Thain:
PONCHO: Dynamic Package Synthesis for Distributed and Serverless Python Applications. HiPS@HPDC 2022: 8-14 - [c101]Ben Tovar, Ben Lyons, Kelci Mohrman, Barry Sly-Delgado, Kevin Lannon, Douglas Thain:
Dynamic Task Shaping for High Throughput Data Analysis Applications in High Energy Physics. IPDPS 2022: 346-356 - 2021
- [c100]Tim Shaffer, Kyle Chard, Douglas Thain:
An Empirical Study of Package Dependencies and Lifetimes in Binder Python Containers. e-Science 2021: 215-224 - [c99]Tim Shaffer, Zhuozhao Li, Ben Tovar, Yadu N. Babuji, T. J. Dasso, Zoe Surma, Kyle Chard, Ian T. Foster, Douglas Thain:
Lightweight Function Monitors for Fine-Grained Management in Large Scale Python Applications. IPDPS 2021: 786-796 - [c98]Thanh Son Phung, Logan T. Ward, Kyle Chard, Douglas Thain:
Not All Tasks Are Created Equal: Adaptive Resource Allocation for Heterogeneous Tasks in Dynamic Workflows. WORKS 2021: 17-24 - [c97]Henri Casanova, Ewa Deelman, Sandra Gesing, Michael D. Hildreth, Stephen Hudson, William Koch, Jeffrey Larson, Mary Ann McDowell, Natalie Meyers, John-Luke Navarro, George Papadimitriou, Ryan Tanaka, Ian J. Taylor, Douglas Thain, Stefan M. Wild, Rosa Filgueira, Rafael Ferreira da Silva:
Emerging Frameworks for Advancing Scientific Workflows Research, Development, and Education. WORKS 2021: 74-80 - [c96]Rafael Ferreira da Silva, Henri Casanova, Kyle Chard, Ilkay Altintas, Rosa M. Badia, Bartosz Balis, Tainã Coleman, Frederik Coppens, Frank Di Natale, Bjoern Enders, Thomas Fahringer, Rosa Filgueira, Grigori Fursin, Daniel Garijo, Carole A. Goble, Dorran Howell, Shantenu Jha, Daniel S. Katz, Daniel E. Laney, Ulf Leser, Maciej Malawski, Kshitij Mehta, Loïc Pottier, Jonathan Ozik, J. Luc Peterson, Lavanya Ramakrishnan, Stian Soiland-Reyes, Douglas Thain, Matthew Wolf:
A Community Roadmap for Scientific Workflows Research and Development. WORKS 2021: 81-90 - [i6]Rafael Ferreira da Silva, Henri Casanova, Kyle Chard, Dan Laney, Dong H. Ahn, Shantenu Jha, Carole A. Goble, Lavanya Ramakrishnan, J. Luc Peterson, Bjoern Enders, Douglas Thain, Ilkay Altintas, Yadu N. Babuji, Rosa M. Badia, Vivien Bonazzi, Tainã Coleman, Michael R. Crusoe, Ewa Deelman, Frank Di Natale, Paolo Di Tommaso, Thomas Fahringer, Rosa Filgueira, Grigori Fursin, Alex Ganose, Björn A. Grüning, Daniel S. Katz, Olga A. Kuchar, Ana Kupresanin, Bertram Ludäscher, Ketan Maheshwari, Marta Mattoso, Kshitij Mehta, Todd S. Munson, Jonathan Ozik, Tom Peterka, Loic Pottier, Tim Randles, Stian Soiland-Reyes, Benjamín Tovar, Matteo Turilli, Thomas D. Uram, Karan Vahi, Michael Wilde, Matthew Wolf, Justin M. Wozniak:
Workflows Community Summit: Bringing the Scientific Workflows Community Together. CoRR abs/2103.09181 (2021) - [i5]Rafael Ferreira da Silva, Henri Casanova, Kyle Chard, Tainã Coleman, Dan Laney, Dong H. Ahn, Shantenu Jha, Dorran Howell, Stian Soiland-Reyes, Ilkay Altintas, Douglas Thain, Rosa Filgueira, Yadu N. Babuji, Rosa M. Badia, Bartosz Balis, Silvina Caíno-Lores, Scott Callaghan, Frederik Coppens, Michael R. Crusoe, Kaushik De, Frank Di Natale, Tu Mai Anh Do, Bjoern Enders, Thomas Fahringer, Anne Fouilloux, Grigori Fursin, Alban Gaignard, Alex Ganose, Daniel Garijo, Sandra Gesing, Carole A. Goble, Adil Hasan, Sebastiaan Huber, Daniel S. Katz, Ulf Leser, Douglas Lowe, Bertram Ludäscher, Ketan Maheshwari, Maciej Malawski, Rajiv Mayani, Kshitij Mehta, André Merzky, Todd S. Munson, Jonathan Ozik, Loïc Pottier, Sashko Ristov, Mehdi Roozmeh, Renan Souza, Frédéric Suter, Benjamín Tovar, Matteo Turilli, Karan Vahi, Alvaro Vidal-Torreira, Wendy R. Whitcup, Michael Wilde, Alan R. Williams, Matthew Wolf, Justin M. Wozniak:
Workflows Community Summit: Advancing the State-of-the-art of Scientific Workflows Management Systems Research and Development. CoRR abs/2106.05177 (2021) - [i4]Rafael Ferreira da Silva, Henri Casanova, Kyle Chard, Ilkay Altintas, Rosa M. Badia, Bartosz Balis, Tainã Coleman, Frederik Coppens, Frank Di Natale, Bjoern Enders, Thomas Fahringer, Rosa Filgueira, Grigori Fursin, Daniel Garijo, Carole A. Goble, Dorran Howell, Shantenu Jha, Daniel S. Katz, Daniel E. Laney, Ulf Leser, Maciej Malawski, Kshitij Mehta, Loïc Pottier, Jonathan Ozik, J. Luc Peterson, Lavanya Ramakrishnan, Stian Soiland-Reyes, Douglas Thain, Matthew Wolf:
A Community Roadmap for Scientific Workflows Research and Development. CoRR abs/2110.02168 (2021) - 2020
- [c95]Chao Zheng, Nathaniel Kremer-Herman, Tim Shaffer, Douglas Thain:
Autoscaling High-Throughput Workloads on Container Orchestrators. CLUSTER 2020: 142-152 - [c94]Tim Shaffer, Nicholas L. Hazekamp, Jakob Blomer, Douglas Thain:
Solving the Container Explosion Problem for Distributed High Throughput Computing. IPDPS 2020: 388-398 - [c93]Nathaniel Kremer-Herman, Douglas Thain:
Log Discovery for Troubleshooting Open Distributed Systems with TLQ. PEARC 2020: 224-231
2010 – 2019
- 2019
- [c92]Nicholas L. Hazekamp, Benjamín Tovar, Douglas Thain:
Dynamic Sizing of Continuously Divisible Jobs for Heterogeneous Resources. eScience 2019: 178-187 - [c91]Tim Shaffer, Nathaniel Kremer-Herman, Douglas Thain:
Flexible Partitioning of Scientific Workflows Using the JX Workflow Language. PEARC 2019: 103 - 2018
- [j32]Peter Ivie, Douglas Thain:
Reproducibility in Scientific Computing. ACM Comput. Surv. 51(3): 63:1-63:36 (2018) - [j31]Benjamín Tovar, Rafael Ferreira da Silva, Gideon Juve, Ewa Deelman, William E. Allcock, Douglas Thain, Miron Livny:
A Job Sizing Strategy for High-Throughput Scientific Workflows. IEEE Trans. Parallel Distributed Syst. 29(2): 240-253 (2018) - [j30]Nicholas L. Hazekamp, Nathaniel Kremer-Herman, Benjamín Tovar, Haiyan Meng, Olivia Choudhury, Scott J. Emrich, Douglas Thain:
Combining Static and Dynamic Storage Management for Data Intensive Scientific Workflows. IEEE Trans. Parallel Distributed Syst. 29(2): 338-350 (2018) - [c90]Chao Zheng, Lukas Rupprecht, Vasily Tarasov, Douglas Thain, Mohamed Mohamed, Dimitrios Skourtis, Amit Warke, Dean Hildebrand:
Wharf: Sharing Docker Images in a Distributed File System. SoCC 2018: 174-185 - [c89]Nicholas L. Hazekamp, Douglas Thain:
An Algebra for Robust Workflow Transformations. eScience 2018: 156-167 - [c88]Tim Shaffer, Kyle M. D. Sweeney, Nathaniel Kremer-Herman, Douglas Thain:
A First Look at the JX Workflow Language. eScience 2018: 352-353 - [c87]Kyle M. D. Sweeney, Douglas Thain:
Early Experience Using Amazon Batch for Scientific Workflows. ScienceCloud@HPDC 2018: 5:1-5:8 - [c86]Kyle M. D. Sweeney, Douglas Thain:
Efficient Integration of Containers into Scientific Workflows. ScienceCloud@HPDC 2018: 7:1-7:6 - [c85]Benjamín Tovar, Nicholas L. Hazekamp, Nathaniel Kremer-Herman, Douglas Thain:
Automatic Dependency Management for Scientific Applications on Clusters. IC2E 2018: 41-49 - [c84]Nicholas L. Hazekamp, Upendra Kumar Devisetty, Nirav C. Merchant, Douglas Thain:
MAKER as a Service: Moving HPC Applications to Jetstream Cloud. IC2E 2018: 72-78 - [c83]Nathaniel Kremer-Herman, Benjamín Tovar, Douglas Thain:
A lightweight model for right-sizing master-worker applications. SC 2018: 39:1-39:13 - [c82]Jeffery Kinnison, Nathaniel Kremer-Herman, Douglas Thain, Walter J. Scheirer:
SHADHO: Massively Scalable Hardware-Aware Distributed Hyperparameter Optimization. WACV 2018: 738-747 - [c81]Lincoln Bryant, Jeremy Van, Benedikt Riedel, Robert W. Gardner, Jose Caballero Bejar, John Hover, Ben Tovar, Kenyi Hurtado, Douglas Thain:
VC3: A Virtual Cluster Service for Community Computation. PEARC 2018: 30:1-30:8 - 2017
- [j29]Ketan Maheshwari, Daniel S. Katz, Sílvia Delgado Olabarriaga, Justin M. Wozniak, Douglas Thain:
Report on the first workshop on negative and null results in eScience. Concurr. Comput. Pract. Exp. 29(2) (2017) - [j28]Patrick Donnelly, Douglas Thain:
Balancing push and pull in Confuga, an active storage cluster file system for scientific workflows. Concurr. Comput. Pract. Exp. 29(4) (2017) - [j27]Dinesh Rajan, Douglas Thain:
Designing Self-Tuning Split-Map-Merge Applications for High Cost-Efficiency in the Cloud. IEEE Trans. Cloud Comput. 5(2): 303-316 (2017) - [c80]Chao Zheng, Ben Tovar, Douglas Thain:
Deploying High Throughput Scientific Workflows on Container Schedulers with Makeflow and Mesos. CCGrid 2017: 130-139 - [c79]Haiyan Meng, Douglas Thain:
Facilitating the Reproducibility of Scientific Workflows with Execution Environment Specifications. ICCS 2017: 705-714 - [c78]Daniel Yue Zhang, Chao Zheng, Dong Wang, Douglas Thain, Xin Mu, Greg Madey, Chao Huang:
Towards Scalable and Dynamic Social Sensing Using A Distributed Computing Framework. ICDCS 2017: 966-976 - [c77]Tim Shaffer, Douglas Thain:
Taming metadata storms in parallel filesystems with metaFS. PDSW-DISCS@SC 2017: 25-30 - [i3]Jeff Kinnison, Nathaniel Kremer-Herman, Douglas Thain, Walter J. Scheirer:
SHADHO: Massively Scalable Hardware-Aware Distributed Hyperparameter Optimization. CoRR abs/1707.01428 (2017) - 2016
- [j26]Haipeng Cai, Raúl A. Santelices, Douglas Thain:
DiaPro: Unifying Dynamic Impact Analyses for Improved and Variable Cost-Effectiveness. ACM Trans. Softw. Eng. Methodol. 25(2): 18:1-18:50 (2016) - [c76]Peter Ivie, Douglas Thain:
PRUNE: A preserving run environment for reproducible scientific computing. eScience 2016: 61-70 - [c75]Haiyan Meng, Douglas Thain, Alexander Vyushkov, Matthias Wolf, Anna Woodard:
Conducting reproducible research with Umbrella: Tracking, creating, and preserving execution environments. eScience 2016: 91-100 - [c74]Haipeng Cai, Douglas Thain:
DistIA: a cost-effective dynamic impact analysis for distributed programs. ASE 2016: 344-355 - [i2]Haipeng Cai, Douglas Thain:
DISTEA: Efficient Dynamic Impact Analysis for Distributed Systems. CoRR abs/1604.04638 (2016) - 2015
- [j25]Peter Sempolinski, Douglas Thain, Zhigang Wei, Ahsan Kareem:
Adapting Collaborative Software Development Techniques to Structural Engineering. Comput. Sci. Eng. 17(5): 27-34 (2015) - [j24]Jakob Blomer, Predrag Buncic, René Meusel, Gerardo Ganis, Igor Sfiligoi, Douglas Thain:
The Evolution of Global Scale Filesystems for Scientific Software Distribution. Comput. Sci. Eng. 17(6): 61-71 (2015) - [j23]Haiyan Meng, Rupa Kommineni, Quan Pham, Robert W. Gardner, Tanu Malik, Douglas Thain:
An invariant framework for conducting reproducible computational science. J. Comput. Sci. 9: 137-142 (2015) - [j22]Olivia Choudhury, Nicholas L. Hazekamp, Douglas Thain, Scott J. Emrich:
Accelerating Comparative Genomics Work ows in a Distributed Environment with Optimized Data Partitioning and Workflow Fusion. Scalable Comput. Pract. Exp. 16(1) (2015) - [c73]Patrick Donnelly, Nicholas L. Hazekamp, Douglas Thain:
Confuga: Scalable Data Intensive Computing for POSIX Workflows. CCGRID 2015: 392-401 - [c72]Anna Woodard, Matthias Wolf, Charles Mueller, Nil Valls, Ben Tovar, Patrick Donnelly, Peter Ivie, Kenyi Hurtado Anampa, Paul R. Brenner, Douglas Thain, Kevin Lannon, Michael D. Hildreth:
Scaling Data Intensive Physics Applications to 10k Cores on Non-dedicated Clusters with Lobster. CLUSTER 2015: 322-331 - [c71]Olivia Choudhury, Dinesh Rajan, Nicholas L. Hazekamp, Sandra Gesing, Douglas Thain, Scott J. Emrich:
Balancing Thread-Level and Task-Level Parallelism for Data-Intensive Workloads on Clusters and Clouds. CLUSTER 2015: 390-393 - [c70]Gideon Juve, Benjamín Tovar, Rafael Ferreira da Silva, Dariusz Król, Douglas Thain, Ewa Deelman, William E. Allcock, Miron Livny:
Practical Resource Monitoring for Robust High Throughput Computing. CLUSTER 2015: 650-657 - [c69]Nicholas L. Hazekamp, Joseph Sarro, Olivia Choudhury, Sandra Gesing, Scott J. Emrich, Douglas Thain:
Scaling Up Bioinformatics Workflows with Dynamic Job Expansion: A Case Study Using Galaxy and Makeflow. e-Science 2015: 332-341 - [c68]Haiyan Meng, Douglas Thain:
Umbrella: A Portable Environment Creator for Reproducible Computing on Clusters, Clouds, and Grids. VTDC@HPDC 2015: 23-30 - [c67]Charles Zheng, Douglas Thain:
Integrating Containers into Workflows: A Case Study Using Makeflow, Work Queue, and Docker. VTDC@HPDC 2015: 31-38 - [c66]Douglas Thain, Peter Ivie, Haiyan Meng:
Techniques for Preserving Scientific Software Executions: Preserve the Mess or Encourage Cleanliness? iPRES 2015 - [c65]An Huynh, Douglas Thain, Miquel Pericàs, Kenjiro Taura:
DAGViz: a DAG visualization tool for analyzing task-parallel program traces. VPA@SC 2015: 3:1-3:8 - 2014
- [j21]Irena Lanc, Peter Bui, Douglas Thain, Scott J. Emrich:
Adapting bioinformatics applications for heterogeneous systems: a case study. Concurr. Comput. Pract. Exp. 26(4): 866-877 (2014) - [j20]Andrew Thrasher, Zachary Musgrave, Brian Kachmarck, Douglas Thain, Scott J. Emrich:
Scaling up genome annotation using MAKER and work queue. Int. J. Bioinform. Res. Appl. 10(4/5): 447-460 (2014) - [j19]Badi Abdul-Wahid, Haoyun Feng, Dinesh Rajan, Ronan Costaouec, Eric Darve, Douglas Thain, Jesús A. Izaguirre:
AWE-WQ: Fast-Forwarding Molecular Dynamics Using the Accelerated Weighted Ensemble. J. Chem. Inf. Model. 54(10): 3033-3043 (2014) - [c64]Peter Ivie, Douglas Thain:
DeltaDB: A Scalable Database Design for Time-Varying Schema-Free Data. BigData Congress 2014: 104-111 - [c63]Dillon Skeehan, Paul R. Brenner, Ben Tovar, Douglas Thain, Nil Valls, Anna Woodard, Matthias Wolf, T. Pearson, S. Lynch, Kevin Lannon:
Opportunistic High Energy Physics Computing in User Space with Parrot. CCGRID 2014: 170-175 - [c62]Nicholas L. Hazekamp, Olivia Choudhury, Sandra Gesing, Scott J. Emrich, Douglas Thain:
Expanding Tasks of Logical Workflows Into Independent Workflows for Improved Scalability. CCGRID 2014: 548-549 - [c61]Olivia Choudhury, Nicholas L. Hazekamp, Douglas Thain, Scott J. Emrich:
Accelerating Comparative Genomics Workflows in a Distributed Environment with Optimized Data Partitioning. CCGRID 2014: 711-719 - [i1]Matthew Staffelbach, Peter Sempolinski, David Hachen, Ahsan Kareem, Tracy Kijewski-Correa, Douglas Thain, Daniel Wei, Greg Madey:
Lessons Learned from an Experiment in Crowdsourcing Complex Citizen Engineering Tasks with Amazon Mechanical Turk. CoRR abs/1406.7588 (2014) - 2013
- [c60]Dinesh Rajan, Andrew Thrasher, Badi Abdul-Wahid, Jesús A. Izaguirre, Scott J. Emrich, Douglas Thain:
Case Studies in Designing Elastic Applications. CCGRID 2013: 466-473 - [c59]Michael Albrecht, Dinesh Rajan, Douglas Thain:
Making work queue cluster-friendly for data intensive scientific applications. CLUSTER 2013: 1-8 - [c58]Patrick Donnelly, Douglas Thain:
Design of an active storage cluster file system for DAG workflows. DISCS@SC 2013: 37-42 - [c57]Rafael Ferreira da Silva, Gideon Juve, Ewa Deelman, Tristan Glatard, Frédéric Desprez, Douglas Thain, Benjamín Tovar, Miron Livny:
Toward fine-grained online task characteristics estimation in scientific workflows. WORKS@SC 2013: 58-67 - [c56]Casey Robinson, Douglas Thain:
Automated packaging of bioinformatics workflows for portability and durability using makeflow. WORKS@SC 2013: 98-105 - 2012
- [j18]Peter Bui, Li Yu, Andrew Thrasher, Rory Carmichael, Irena Lanc, Patrick Donnelly, Douglas Thain:
Scripting distributed scientific workflows using Weaver. Concurr. Comput. Pract. Exp. 24(15): 1685-1707 (2012) - [j17]Hoang Bui, Peter Bui, Patrick J. Flynn, Douglas Thain:
ROARS: a robust object archival system for data intensive scientific computing. Distributed Parallel Databases 30(5-6): 325-350 (2012) - [j16]Christopher Moretti, Andrew Thrasher, Li Yu, Michael Olson, Scott J. Emrich, Douglas Thain:
A Framework for Scalable Genome Assembly on Clusters, Clouds, and Grids. IEEE Trans. Parallel Distributed Syst. 23(12): 2189-2197 (2012) - [c55]Patrick Donnelly, Douglas Thain:
Fine-Grained Access Control in the Chirp Distributed File System. CCGRID 2012: 33-40 - [c54]Li Yu, Douglas Thain:
Resource Management for Elastic Cloud Workflows. CCGRID 2012: 775-780 - [c53]Badi Abdul-Wahid, Li Yu, Dinesh Rajan, Haoyun Feng, Eric Darve, Douglas Thain, Jesús A. Izaguirre:
Folding proteins at 500 ns/hour with Work Queue. eScience 2012: 1-8 - [c52]Peter Sempolinski, Douglas Thain, Daniel Wei, Ahsan Kareem:
A system for management of Computational Fluid Dynamics simulations for civil engineering. eScience 2012: 1-8 - [c51]Andrew Thrasher, Douglas Thain, Scott J. Emrich, Zachary Musgrave:
Shifting the bioinformatics computing paradigm: A case study in parallelizing genome annotation using MAKER and Work Queue. ICCABS 2012: 1-6 - [c50]Michael Albrecht, Patrick Donnelly, Peter Bui, Douglas Thain:
Makeflow: a portable abstraction for data intensive computing on clusters, clouds, and grids. SWEET@SIGMOD 2012: 1 - [e2]Tevfik Kosar, Douglas Thain:
DIDC'12, Fifth International Workshop on Data-Intensive Distributed Computing, Delft, The Netherlands, June 19, 2012. ACM 2012, ISBN 978-1-4503-1341-4 [contents] - [r1]Paul R. Brenner, Douglas Thain, Aimee Buccellato, David B. Go:
Environmentally Opportunistic Computing. Handbook of Energy-Aware and Green Computing 2012: 949-964 - 2011
- [j15]Rory Carmichael, Patrick Braga-Henebry, Douglas Thain, Scott J. Emrich:
Biocompute 2.0: an improved collaborative workspace for data intensive bio-science. Concurr. Comput. Pract. Exp. 23(17): 2305-2314 (2011) - [c49]Dinesh Rajan, Anthony Canino, Jesús A. Izaguirre, Douglas Thain:
Converting a High Performance Application to an Elastic Cloud Application. CloudCom 2011: 383-390 - [c48]Zhi Zhai, Peter Sempolinski, Douglas Thain, Gregory R. Madey, Daniel Wei, Ahsan Kareem:
Expert-Citizen Engineering: "Crowdsourcing" Skilled Citizens. DASC 2011: 879-886 - [e1]Arthur B. Maccabe, Douglas Thain:
Proceedings of the 20th ACM International Symposium on High Performance Distributed Computing, HPDC 2011, San Jose, CA, USA, June 8-11, 2011. ACM 2011, ISBN 978-1-4503-0552-5 [contents] - 2010
- [j14]Li Yu, Christopher Moretti, Andrew Thrasher, Scott J. Emrich, Kenneth Judd, Douglas Thain:
Harnessing parallelism in multicore clusters with the All-Pairs, Wavefront, and Makeflow abstractions. Clust. Comput. 13(3): 243-256 (2010) - [j13]Ioan Raicu, Ian T. Foster, Mike Wilde, Zhao Zhang, Kamil Iskra, Peter H. Beckman, Yong Zhao, Alexander S. Szalay, Alok N. Choudhary, Philip Little, Christopher Moretti, Amitabh Chaudhary, Douglas Thain:
Middleware support for many-task computing. Clust. Comput. 13(3): 291-314 (2010) - [j12]Kyle B. Wheeler, Douglas Thain:
Visualizing massively multithreaded applications with ThreadScope. Concurr. Comput. Pract. Exp. 22(1): 45-67 (2010) - [j11]Christopher Moretti, Hoang Bui, Karen Hollingsworth, Brandon Rich, Patrick J. Flynn, Douglas Thain:
All-Pairs: An Abstraction for Data-Intensive Computing on Campus Grids. IEEE Trans. Parallel Distributed Syst. 21(1): 33-46 (2010) - [c47]Peter Sempolinski, Douglas Thain:
A Comparison and Critique of Eucalyptus, OpenNebula and Nimbus. CloudCom 2010: 417-426 - [c46]Patrick Donnelly, Peter Bui, Douglas Thain:
Attaching Cloud Storage to a Campus Grid Using Parrot, Chirp, and Hadoop. CloudCom 2010: 488-495 - [c45]Katarzyna Keahey, Domenico Laforenza, Alexander Reinefeld, Pierluigi Ritrovato, Douglas Thain, Nancy Wilkins-Diehr:
Grid, Cluster and Cloud Computing. Euro-Par (1) 2010: 341-342 - [c44]Paul R. Brenner, Ryan Jansen, David B. Go, Douglas Thain:
Environmentally Opportunistic Computing transforming the data center for economic and environmental sustainability. Green Computing Conference 2010: 383-388 - [c43]Rory Carmichael, Patrick Braga-Henebry, Douglas Thain, Scott J. Emrich:
Biocompute: towards a collaborative workspace for data intensive bio-science. HPDC 2010: 489-498 - [c42]Hoang Bui, Diane Wright, Clarence Helm, Rachel Witty, Patrick J. Flynn, Douglas Thain:
Towards long term data quality in a large scale biometrics experiment. HPDC 2010: 565-572 - [c41]Peter Bui, Li Yu, Douglas Thain:
Weaver: integrating distributed computing abstractions into scientific workflows using Python. HPDC 2010: 636-643 - [c40]Hoang Bui, Peter Bui, Patrick J. Flynn, Douglas Thain:
ROARS: a scalable repository for data intensive scientific computing. HPDC 2010: 766-775
2000 – 2009
- 2009
- [j10]Hoang Bui, Michael Kelly, Christopher Lyon, Mark Pasquier, Deborah Thomas, Patrick J. Flynn, Douglas Thain:
Experience with BXGrid: a data repository and computing grid for biometrics research. Clust. Comput. 12(4): 373-386 (2009) - [j9]Douglas Thain, Christopher Moretti, Jeffrey Hemmes:
Chirp: a practical global filesystem for cluster and Grid computing. J. Grid Comput. 7(1): 51-72 (2009) - [j8]Andrew Blaich, Douglas Thain, Aaron Striegel:
Reflections on the virtues of modularity: a case study in linux security modules. Softw. Pract. Exp. 39(15): 1235-1251 (2009) - [c39]Jeffrey Hemmes, Douglas Thain, Christian Poellabauer:
Cooperative Localization in GPS-Limited Urban Environments. ADHOCNETS 2009: 422-437 - [c38]Michael Lammie, Paul R. Brenner, Douglas Thain:
Scheduling Grid workloads on multicore clusters to minimize energy and maximize performance. GRID 2009: 145-152 - [c37]Li Yi, Christopher Moretti, Scott J. Emrich, Kenneth Judd, Douglas Thain:
Harnessing parallelism in multicore clusters with the all-pairs and wavefront abstractions. HPDC 2009: 1-10 - [c36]Ioan Raicu, Ian T. Foster, Yong Zhao, Philip Little, Christopher Moretti, Amitabh Chaudhary, Douglas Thain:
The quest for scalable support of data-intensive workloads in distributed systems. HPDC 2009: 207-216 - [c35]Christopher Moretti, Michael Olson, Scott J. Emrich, Douglas Thain:
Highly scalable genome assembly on campus grids. SC-MTAGS 2009 - [p2]Tevfik Kosar, Andrei Hutanu, Jon MacLaren, Douglas Thain:
Coordination of Access to Large-Scale Datasets in Distributed Environments. Scientific Data Management 2009 - 2008
- [j7]Justin M. Wozniak, Paul R. Brenner, Douglas Thain, Aaron Striegel, Jesús A. Izaguirre:
Making the best of a bad situation: Prioritized storage management in GEMS. Future Gener. Comput. Syst. 24(1): 10-16 (2008) - [j6]Paul R. Brenner, Justin M. Wozniak, Douglas Thain, Aaron Striegel, Jeffrey W. Peng, Jesús A. Izaguirre:
Biomolecular committor probability calculation enabled by processing in network storage. Parallel Comput. 34(11): 652-660 (2008) - [c34]Hoang Bui, Deborah Thomas, Michael Kelly, Christopher Lyon, Douglas Thain, Patrick J. Flynn:
BXGrid: A Data Repository and Workflow Abstraction for Biometrics Research. eScience 2008: 394-395 - [c33]Douglas Thain, Christopher Moretti, Hoang Bui, Li Yu, Nitesh V. Chawla, Patrick J. Flynn:
Using Small Abstractions to Program Large Distributed Systems. eScience 2008: 723-724 - [c32]David A. Cieslak, Nitesh V. Chawla, Douglas Thain:
Troubleshooting thousands of jobs on production grids using data mining techniques. GRID 2008: 217-224 - [c31]Brandon Rich, Douglas Thain:
DataLab: transactional data-parallel computing on an active storage cloud. HPDC 2008: 233-234 - [c30]Christopher Moretti, Karsten Steinhaeuser, Douglas Thain, Nitesh V. Chawla:
Scaling up Classifiers to Cloud Computers. ICDM 2008: 472-481 - [c29]Nitesh V. Chawla, Douglas Thain, Ryan Lichtenwalter, David A. Cieslak:
Data mining on the grid for the grid. IPDPS 2008: 1-5 - [c28]Christopher Moretti, Jared Bulosan, Douglas Thain, Patrick J. Flynn:
All-pairs: An abstraction for data-intensive cloud computing. IPDPS 2008: 1-11 - [c27]Kyle B. Wheeler, Richard C. Murphy, Douglas Thain:
Qthreads: An API for programming with millions of lightweight threads. IPDPS 2008: 1-8 - [c26]Qi Liao, Andrew Blaich, Aaron Striegel, Douglas Thain:
ENAVis: Enterprise Network Activities Visualization. LISA 2008: 59-74 - 2007
- [c25]Douglas Thain, Christopher Moretti:
Efficient access to many samall files in a filesystem for grid computing. GRID 2007: 243-250 - [c24]Paul R. Brenner, Justin M. Wozniak, Douglas Thain, Aaron Striegel, Jeffrey W. Peng, Jesús A. Izaguirre:
Biomolecular Path Sampling Enabled by Processing in Network Storage. IPDPS 2007: 1-6 - [c23]Christopher Moretti, Timothy C. Faltemier, Douglas Thain, Patrick J. Flynn:
Challenges in Executing Data Intensive Biometric Workloads on a Desktop Grid. IPDPS 2007: 1-8 - 2006
- [j5]Sander Klous, Jaime Frey, Se-Chang Son, Douglas Thain, Alain Roy, Miron Livny, Jo F. J. van den Brand:
Transparent access to Grid resources for user software. Concurr. Comput. Pract. Exp. 18(7): 787-801 (2006) - [j4]Douglas Thain, Todd Tannenbaum, Miron Livny:
How to measure a large open-source distributed system. Concurr. Comput. Pract. Exp. 18(15): 1989-2019 (2006) - [c22]Stefano Belforte, Matthew Norman, Subir Sarkar, Igor Sfiligoi, Douglas Thain, Frank Würthwein:
Using Condor Glide-Ins and Parrot to Move from Dedicated Ressources to the Grid. ARCS Workshops 2006: 285-292 - [c21]Sudharshan S. Vazhkudai, Douglas Thain, Xiaosong Ma, Vincent W. Freeh:
Positioning Dynamic Storage Caches for Transient Data. CLUSTER 2006 - [c20]Douglas Thain:
Operating System Support for Space Allocation in Grid Storage Systems. GRID 2006: 104-111 - [c19]Christophe Blanchet, Rémi Mollon, Douglas Thain, Gilbert Deléage:
Grid Deployment of Legacy Bioinformatics Applications with Transparent Data Access. GRID 2006: 120-127 - [c18]Jeffrey Hemmes, Douglas Thain:
Cacheable Decentralized Groups for Grid Resource Access Control. GRID 2006: 192-199 - [c17]David A. Cieslak, Douglas Thain, Nitesh V. Chawla:
Troubleshooting Distributed Systems via Data Mining. HPDC 2006: 309-312 - [c16]Faruck Morcos, Thidapat Chantem, Philip Little, Tiago Gasiba, Douglas Thain:
iDIBS: An Improved Distributed Backup System. ICPADS (1) 2006: 58-67 - [c15]Justin M. Wozniak, Paul R. Brenner, Douglas Thain:
Access control for a replica management database. StorageSS 2006: 41-46 - 2005
- [j3]Douglas Thain, Todd Tannenbaum, Miron Livny:
Distributed computing in practice: the Condor experience. Concurr. Pract. Exp. 17(2-4): 323-356 (2005) - [j2]Douglas Thain, Miron Livny:
Parrot: Transparent User-Level Middleware for Data-Intensive Computing. Scalable Comput. Pract. Exp. 6(3) (2005) - [c14]Justin M. Wozniak, Paul R. Brenner, Douglas Thain, Aaron Striegel, Jesús A. Izaguirre:
Generosity and gluttony in GEMS: grid enabled molecular simulations. HPDC 2005: 191-200 - [c13]Douglas Thain:
Identity boxing: secure user-level containment for the grid. HPDC 2005: 299-300 - [c12]Douglas Thain:
Identity Boxing: A New Technique for Consistent Global Identity. SC 2005: 51 - [c11]Douglas Thain, Sander Klous, Justin M. Wozniak, Paul R. Brenner, Aaron Striegel, Jesús A. Izaguirre:
Separating Abstractions from Resources in a Tactical Storage System. SC 2005: 55 - [c10]Douglas Thain, Christopher Moretti, Paul Madrid, Philip Snowberger, Jeffrey Hemmes:
The Consequences of Decentralized Security in a Cooperative Storage System. IEEE Security in Storage Workshop 2005: 71-82 - 2004
- [c9]John Bent, Douglas Thain, Andrea C. Arpaci-Dusseau, Remzi H. Arpaci-Dusseau, Miron Livny:
Explicit Control in the Batch-Aware Distributed File System. NSDI 2004: 365-378 - [p1]Douglas Thain, Miron Livny:
Building Reliable Clients and Services. The Grid 2, 2nd Edition 2004: 285-318 - 2003
- [c8]Oleg Lodygensky, Gilles Fedak, Franck Cappello, Vincent Néri, Miron Livny, Douglas Thain:
XtremWeb & Condor sharing resources between Internet connected Condor pools. CCGRID 2003: 382-389 - [c7]Douglas Thain, Miron Livny:
The Ethernet Approach to Grid Computing. HPDC 2003: 138-151 - [c6]Douglas Thain, John Bent, Andrea C. Arpaci-Dusseau, Remzi H. Arpaci-Dusseau, Miron Livny:
Pipeline and Batch Sharing in Grid Workloads. HPDC 2003: 152-161 - 2002
- [c5]Douglas Thain, Miron Livny:
Error Scope on a Computational Grid: Theory and Practice. HPDC 2002: 199-208 - [c4]Miron Livny, Douglas Thain:
Caveat Emptor: Making Grid Services Dependable from the Client Side. PRDC 2002: 117-120 - 2001
- [j1]Douglas Thain, Miron Livny:
Multiple Bypass: Interposition Agents for Distributed Computing. Clust. Comput. 4(1): 39-47 (2001) - [c3]Douglas Thain, Jim Basney, Se-Chang Son, Miron Livny:
The Kangaroo Approach to Data Movement on the Grid. HPDC 2001: 325-333 - [c2]Douglas Thain, John Bent, Andrea C. Arpaci-Dusseau, Remzi H. Arpaci-Dusseau, Miron Livny:
Gathering at the well: creating communities for grid I/O. SC 2001: 58 - 2000
- [c1]Douglas Thain, Miron Livny:
Bypass: A Tool for Building Split Execution Systems. HPDC 2000: 79-86
Coauthor Index
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