- Luc Mottin, Emilie Pasche
, Julien Gobeill, Valentine Rech de Laval, Anne Gleizes, Pierre-André Michel, Amos Bairoch, Pascale Gaudet, Patrick Ruch:
Triage by ranking to support the curation of protein interactions. Database J. Biol. Databases Curation 2017: bax040 (2017) - Leandro Costa Nascimento, Marcela Mendes Salazar, Jorge Lepikson-Neto, Eduardo Leal Oliveira Camargo, Lucas Salera Parreiras, Gonçalo Amarante Guimarães Pereira, Marcelo Falsarella Carazzolle:
EUCANEXT: an integrated database for the exploration of genomic and transcriptomic data from Eucalyptus species. Database J. Biol. Databases Curation 2017: bax079 (2017) - I-Man Ng, Jia-Hsin Huang, Shang-Chi Tsai, Huai-Kuang Tsai:
IsoPlot: a database for comparison of mRNA isoforms in fruit fly and mosquitoes. Database J. Biol. Databases Curation 2017: bax069 (2017) - Yueqiong Ni, Kasper Jensen, Irene Kouskoumvekaki, Gianni Panagiotou:
NutriChem 2.0: exploring the effect of plant-based foods on human health and drug efficacy. Database J. Biol. Databases Curation 2017: bax044 (2017) - Luciana Márcia de Oliveira, Raissa Nogueira de Brito, Paul Anderson Souza Guimarães, Rômulo Vitor Mastrângelo Amaro dos Santos, Liléia Gonçalves Diotaiuti, Rita de Cássia Moreira de Souza, Jeronimo Conceição Ruiz:
TriatoKey: a web and mobile tool for biodiversity identification of Brazilian triatomine species. Database J. Biol. Databases Curation 2017: bax033 (2017) - Suzanne M. Paley, Peter D. Karp:
Update notifications for the BioCyc collection of databases. Database J. Biol. Databases Curation 2017: bax086 (2017) - Rajan Pandey, Pawan Kumar, Dinesh Gupta:
KiPho: malaria parasite kinome and phosphatome portal. Database J. Biol. Databases Curation 2017: bax063 (2017) - Martín Pérez-Pérez, Gael Pérez Rodríguez, Florentino Fdez-Riverola, Anália Lourenço:
Collaborative relation annotation and quality analysis in Markyt environment. Database J. Biol. Databases Curation 2017: bax090 (2017) - Guillaume Postic, Yassine Ghouzam, Catherine Etchebest, Jean-Christophe Gelly:
TMPL: a database of experimental and theoretical transmembrane protein models positioned in the lipid bilayer. Database J. Biol. Databases Curation 2017: bax022 (2017) - Tim E. Putman, Sebastien Lelong, Sebastian Burgstaller-Muehlbacher, Andra Waagmeester, Colin M. Diesh, Nathan A. Dunn, Monica C. Munoz-Torres, Gregory S. Stupp, Chunlei Wu, Andrew I. Su, Benjamin M. Good:
WikiGenomes: an open web application for community consumption and curation of gene annotation data in Wikidata. Database J. Biol. Databases Curation 2017: bax025 (2017) - K. E. Ravikumar, Majid Rastegar-Mojarad, Hongfang Liu:
BELMiner: adapting a rule-based relation extraction system to extract biological expression language statements from bio-medical literature evidence sentences. Database J. Biol. Databases Curation 2017: baw156 (2017) - Fabio Rinaldi, Oscar Lithgow-Serrano, Socorro Gama-Castro, Hilda Solano-Lira, Alejandra López-Fuentes, Luis Muñiz-Rascado, Cecilia Ishida-Gutiérrez, Carlos-Francisco Méndez-Cruz, Julio Collado-Vides:
Strategies towards digital and semi-automated curation in RegulonDB. Database J. Biol. Databases Curation 2017: bax012 (2017) - Fabio Rinaldi, Oscar Lithgow-Serrano, Socorro Gama-Castro, Hilda Solano-Lira, Alejandra López-Fuentes, Luis Muñiz-Rascado, Cecilia Ishida-Gutiérrez, Carlos-Francisco Méndez-Cruz, Julio Collado-Vides:
Erratum: Strategies towards digital and semi-automated curation in RegulonDB. Database J. Biol. Databases Curation 2017: bax012 (2017) - Barbara Robbertse, Pooja K. Strope, Priscila Chaverri, Romina Gazis, Stacy Ciufo, Michael Domrachev, Conrad L. Schoch:
Improving taxonomic accuracy for fungi in public sequence databases: applying 'one name one species' in well-defined genera with Trichoderma/Hypocrea as a test case. Database J. Biol. Databases Curation 2017: bax072 (2017) - Kirk Roberts, Anupama E. Gururaj, Xiaoling Chen, Saeid Pournejati, William R. Hersh, Dina Demner-Fushman, Lucila Ohno-Machado, Trevor Cohen, Hua Xu:
Information retrieval for biomedical datasets: the 2016 bioCADDIE dataset retrieval challenge. Database J. Biol. Databases Curation 2017: bax068 (2017) - Wojciech Rosikiewicz, Michal Kabza, Jan Kosinski, Joanna Ciomborowska-Basheer, Magdalena R. Kubiak, Izabela Makalowska:
RetrogeneDB-a database of plant and animal retrocopies. Database J. Biol. Databases Curation 2017: bax038 (2017) - Max Ruas, Valentin Guignon, Guilhem Sempéré, Julie Sardos, Yann Hueber, H. Duvergey, Alain Andrieu, Richard Chase, Christophe Jenny, Tom Hazekamp, Brian M. Irish, K. Jelali, J. Adeka, Tomás Ayala-Silva, C. P. Chao, Jeff W. Daniells, B. Dowiya, B. Effa effa, L. Gueco, L. Herradura, L. Ibobondji, E. Kempenaers, J. Kilangi, S. Muhangi, P. Ngo Xuan, J. Paofa, Claudie Pavis, Deless Thiémélé, Colette Tossou, Jeffrey Sandoval, Asti Sutanto, G. Vangu Paka, Guilian Yi, Ines van den houwe, Nicolas Roux, Mathieu Rouard:
MGIS: managing banana (Musa spp.) genetic resources information and high-throughput genotyping data. Database J. Biol. Databases Curation 2017: bax046 (2017) - Magali Ruffier, Andreas Kähäri, Monika Komorowska, Stephen Keenan, Matthew R. Laird, Ian Longden, Glenn Proctor, Steve Searle, Daniel M. Staines, Kieron R. Taylor, Alessandro Vullo, Andrew D. Yates, Daniel R. Zerbino, Paul Flicek:
Ensembl core software resources: storage and programmatic access for DNA sequence and genome annotation. Database J. Biol. Databases Curation 2017: bax020 (2017) - Surya Saha, Prashant S. Hosmani, Krystal Villalobos-Ayala, Sherry Miller, Teresa Shippy, Mirella Flores, Andrew Rosendale, Chris Cordola, Tracey Bell, Hannah Mann, Gabe DeAvila, Daniel DeAvila, Zachary Moore, Kyle Buller, Kathryn Ciolkevich, Samantha Nandyal, Robert Mahoney, Joshua Van Voorhis, Megan Dunlevy, David C. Farrow, David Hunter, Taylar Morgan, Kayla Shore, Victoria Guzman, Allison Izsak, Danielle E. Dixon, Andrew Cridge, Liliana M. Cano, Xiaolong Cao, Haobo Jiang, Nan Leng, Shannon Johnson, Brandi L. Cantarel, Stephen Richards, Adam C. English, Robert G. Shatters, Christopher P. Childers, Mei-Ju Chen, Wayne B. Hunter, Michelle Cilia, Lukas A. Mueller, Monica C. Munoz-Torres, David Nelson, Monica Poelchau, Joshua B. Benoit, Helen Wiersma-Koch, Tom D'Elia, Susan J. Brown:
Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community. Database J. Biol. Databases Curation 2017: bax032 (2017) - Antony Scerri, John Kuriakose, Amit Ajit Deshmane, Mark Stanger, Peter Cotroneo, Rebekah Moore, Raj Naik, Anita de Waard:
Elsevier's approach to the bioCADDIE 2016 Dataset Retrieval Challenge. Database J. Biol. Databases Curation 2017: bax056 (2017) - Taner Z. Sen, Bremen L. Braun, David A. Schott, John L. Portwood II, Mary L. Schaeffer, Lisa C. Harper, Jack M. Gardiner, Ethalinda K. S. Cannon, Carson M. Andorf:
Surveying the Maize community for their diversity and pedigree visualization needs to prioritize tool development and curation. Database J. Biol. Databases Curation 2017: bax031 (2017) - Pedro Sernadela, José Luís Oliveira:
A semantic-based workflow for biomedical literature annotation. Database J. Biol. Databases Curation 2017: bax088 (2017) - Ankit Sharma, Vrushali Deshpande, Madankumar Ghatge, Rajani Kanth Vangala:
In-Cardiome: integrated knowledgebase for coronary artery disease enabling translational research. Database J. Biol. Databases Curation 2017: bax077 (2017) - Lei Sheng, Haiyang Jiang, Hanwei Yan, Xiaoyu Li, Yongxiang Lin, Hui Ye, Beijiu Cheng:
MGFD: the maize gene families database. Database J. Biol. Databases Curation 2017: bax050 (2017) - Víctor Suárez-Paniagua, Isabel Segura-Bedmar, Paloma Martínez:
Exploring convolutional neural networks for drug-drug interaction extraction. Database J. Biol. Databases Curation 2017: bax019 (2017) - Lutz Suhrbier, Wolf-Henning Kusber, Okka Tschöpe, Anton Güntsch, Walter G. Berendsohn:
AnnoSys - implementation of a generic annotation system for schema-based data using the example of biodiversity collection data. Database J. Biol. Databases Curation 2017: bax018 (2017) - Lutz Suhrbier, Wolf-Henning Kusber, Okka Tschöpe, Anton Güntsch, Walter G. Berendsohn:
AnnoSys - implementation of a generic annotation system for schema-based data using the example of biodiversity collection data. Database J. Biol. Databases Curation 2017: bax036 (2017) - Ya-Zhou Sun, De-Hong Zhang, Zhong Ming, Jian-Qiang Li, Xing Chen:
DLREFD: a database providing associations of long non-coding RNAs, environmental factors and phenotypes. Database J. Biol. Databases Curation 2017: bax084 (2017) - Anuradha Surendra, Miroslava Cuperlovic-Culf:
Database of resistance related metabolites in Wheat Fusarium head blight Disease (MWFD). Database J. Biol. Databases Curation 2017: bax076 (2017) - Michal Wojciech Szczesniak, Michal Kabza, Justyna A. Karolak, Malgorzata Rydzanicz, Dorota M. Nowak, Barbara Ginter-Matuszewska, Piotr Polakowski, Rafal Ploski, Jacek P. Szaflik, Marzena Gajecka:
KTCNlncDB - a first platform to investigate lncRNAs expressed in human keratoconus and non-keratoconus corneas. Database J. Biol. Databases Curation 2017: baw168 (2017)
