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Sinan Kockara
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Journal Articles
- 2024
- [j15]Yasar C. Kakdas, Sinan Kockara, Tansel Halic, Doga Demirel:
Enhancing Medical Training Through Learning From Mistakes by Interacting With an Ill-Trained Reinforcement Learning Agent. IEEE Trans. Learn. Technol. 17: 1248-1260 (2024) - 2022
- [j14]Doga Demirel, Bryce Palmer, Gunnar Sundberg, Bayazit Karaman, Tansel Halic, Sinan Kockara, Nizamettin Kockara, Mark Edward Rogers, Shahryar Ahmadi:
Scoring metrics for assessing skills in arthroscopic rotator cuff repair: performance comparison study of novice and expert surgeons. Int. J. Comput. Assist. Radiol. Surg. 17(10): 1823-1835 (2022) - 2020
- [j13]Doga Demirel, Berk Cetinsaya, Tansel Halic, Sinan Kockara, Dirk Reiners, Shahryar Ahmadi, Venkata Sreekanth Arikatla:
A partition-based optimization model and its performance benchmark for Generative Anatomy Modeling Language. Comput. Biol. Medicine 119: 103695 (2020) - 2019
- [j12]Mustafa Bayraktar, Sinan Kockara, Tansel Halic, Mutlu Mete, Henry K. Wong, Kamran Iqbal:
Local edge-enhanced active contour for accurate skin lesion border detection. BMC Bioinform. 20-S(2): 87-97 (2019) - [j11]Doga Demirel, Berk Cetinsaya, Tansel Halic, Sinan Kockara, Shahryar Ahmadi:
Partition-based optimization model for generative anatomy modeling language (POM-GAML). BMC Bioinform. 20-S(2): 99-114 (2019) - 2017
- [j10]Recep Erol, Mustafa Bayraktar, Sinan Kockara, Sertan Kaya, Tansel Halic:
Texture based skin lesion abruptness quantification to detect malignancy. BMC Bioinform. 18(14): 51-60 (2017) - 2016
- [j9]Sertan Kaya, Mustafa Bayraktar, Sinan Kockara, Mutlu Mete, Tansel Halic, Halle E. Field, Henry K. Wong:
Abrupt skin lesion border cutoff measurement for malignancy detection in dermoscopy images. BMC Bioinform. 17(S-13): 367 (2016) - 2015
- [j8]James Lemon, Sinan Kockara, Tansel Halic, Mutlu Mete:
Density-based parallel skin lesion border detection with webCL. BMC Bioinform. 16(S13): S5 (2015) - [j7]Thomas Ryan Stovall, Sinan Kockara, Recep Avci:
GPUSCAN: GPU-Based Parallel Structural Clustering Algorithm for Networks. IEEE Trans. Parallel Distributed Syst. 26(12): 3381-3393 (2015) - 2011
- [j6]Sait Suer, Sinan Kockara, Mutlu Mete:
An improved border detection in dermoscopy images for density based clustering. BMC Bioinform. 12(S-10): S12 (2011) - [j5]Mutlu Mete, Sinan Kockara, Kemal Aydin:
Fast density-based lesion detection in dermoscopy images. Comput. Medical Imaging Graph. 35(2): 128-136 (2011) - 2010
- [j4]Sinan Kockara, Mutlu Mete, Vincent Yip, Brendan Lee, Kemal Aydin:
A soft kinetic data structure for lesion border detection. Bioinform. 26(12): 21-28 (2010) - [j3]Tansel Halic, Sinan Kockara, Coskun Bayrak, Richard Rowe:
Mixed reality simulation of rasping procedure in artificial cervical disc replacement (ACDR) surgery. BMC Bioinform. 11(S-6): S11 (2010) - [j2]Sinan Kockara, Mutlu Mete, Bernard Chen, Kemal Aydin:
Analysis of density based and fuzzy c-means clustering methods on lesion border extraction in dermoscopy images. BMC Bioinform. 11(S-6): S26 (2010) - 2009
- [j1]Sinan Kockara, Tansel Halic, Coskun Bayrak, Kamran Iqbal, Richard Rowe:
Contact Detection Algorithms. J. Comput. 4(10): 1053-1063 (2009)
Conference and Workshop Papers
- 2023
- [c18]Aditya Dendukuri, Mustafa Tunc, Doga Demirel, Sinan Kockara, Tansel Halic:
Unified Framework for Real-Time Fluid Simulation in Virtual Rotator Cuff Arthroscopic Skill Trainer (ViRCAST). BIBE 2023: 346-353 - [c17]Doga Demirel, Jason Smith, Sinan Kockara, Tansel Halic:
GPU Based Position Based Dynamics for Surgical Simulators. HCI (36) 2023: 81-88 - [c16]William Kwabla, Furkan Dinc, Khalil Oumimoun, Sinan Kockara, Tansel Halic, Doga Demirel, Sreekanth Arikatla, Shahryar Ahmadi:
Evaluation of WebRTC in the Cloud for Surgical Simulations: A Case Study on Virtual Rotator Cuff Arthroscopic Skill Trainer (ViRCAST). HCI (31) 2023: 127-143 - 2021
- [c15]Seema Shedage, Jake Farmer, Doga Demirel, Tansel Halic, Sinan Kockara, Venkata Sreekanth Arikatla, Kevin W. Sexton, Shahryar Ahmadi:
Development of Virtual Skill Trainers and Their Validation Study Analysis Using Machine Learning. ICISDM 2021: 8-13 - 2020
- [c14]Jake Farmer, Mustafa Tunc, Daniel Ahmadi, Doga Demirel, Tansel Halic, Venkata Sreekanth Arikatla, Sinan Kockara, Shahryar Ahmadi:
Virtual Rotator Cuff Arthroscopic Skill Trainer: Results and Analysis of a Preliminary Subject Study. ICISDM 2020: 139-143 - 2016
- [c13]Alexander Yu, Doga Demirel, Tansel Halic, Sinan Kockara:
Virtual Intraoperative Cholangiogram Using WebCL. MMVR 2016: 459-464 - 2015
- [c12]Sinan Kockara, Mutlu Mete, Tansel Halic, Nurcan Yuruk, Muhyeddin Ercan, Ashley Lawrence:
Fractals for Malignancy Detection in Dermoscopy Images. ICHI 2015: 115-121 - 2011
- [c11]Vincent Yip, Sinan Kockara, Chenyi Hu:
Efficient Calculation of Structural Similarity Threshold for the SCAN Network Clustering Algorithm. BIBM 2011: 600-603 - 2010
- [c10]Vincent Yip, Bernard Chen, Sinan Kockara:
Extraction of Protein Sequence Motifs Information by Bi-Clustering Algorithm. BIOCOMP 2010: 185-190 - 2009
- [c9]Sinan Kockara, Tansel Halic, Coskun Bayrak:
Real-time Minute Change Detection on GPU for Cellular and Remote Sensor Imaging. AINA Workshops 2009: 13-18 - [c8]Bernard Chen, Sinan Kockara:
Mining Positional Association Super-Rules on Fixed-Size Protein Sequence Motifs. BIBE 2009: 1-8 - [c7]Tansel Halic, Sinan Kockara, Coskun Bayrak, Richard Rowe, Bernard Chen:
Soft Tissue Deformation and Optimized Data Structures for Mass Spring Methods. BIBE 2009: 45-52 - [c6]Sinan Kockara, Vincent Yip, Mutlu Mete:
Balls Hierarchy: Image Segmentation by Graph Spanner. ISBI 2009: 514-517 - [c5]Sinan Kockara:
Balls Hierarchy: A Proximity Query for Metric Spaces and Covering Theorem. NBiS 2009: 512-518 - [c4]Sinan Kockara, Emre Ermisoglu, Fatih Sen, Tansel Halic, Coskun Bayrak, Richard Rowe:
A Scooping Simulation Framework for Artificial Cervical Disc Replacement Surgery. SMC 2009: 900-905 - 2007
- [c3]Tansel Halic, Sinan Kockara, Coskun Bayrak, Kamran Iqbal, Richard Rowe:
Two-way semi-automatic registration in augmented reality system. SMC 2007: 3390-3395 - [c2]Sinan Kockara, Tansel Halic, Kamran Iqbal, Coskun Bayrak, Richard Rowe:
Collision detection: A survey. SMC 2007: 4046-4051 - 2006
- [c1]Sinan Kockara, Nawab Ali, Serhan Dagtas:
Efficient 3-D visualization of cellular structures through reuse of multi-focal 2-D images. IRI 2006: 298-302
Coauthor Index
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