default search action
Google
Google Scholar
Semantic Scholar
Internet Archive Scholar
CiteSeerX
ORCIDRyo Yoshida
Person information
Refine list
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2024
[j26]Yu Toyoshima
, Hirofumi Sato, Daiki Nagata, Manami Kanamori, Moon Sun Jang, Koyo Kuze, Suzu Oe, Takayuki Teramoto, Yuishi Iwasaki, Ryo Yoshida, Takeshi Ishihara, Yuichi Iino:
Ensemble dynamics and information flow deduction from whole-brain imaging data. PLoS Comput. Biol. 20(3): 1011848 (2024)- [c26]Ryo Yoshida, Taiga Someya, Yohei Oseki:
Tree-Planted Transformers: Unidirectional Transformer Language Models with Implicit Syntactic Supervision. ACL (Findings) 2024: 5120-5134 - [c25]Tatsuki Kuribayashi, Ryo Ueda, Ryo Yoshida, Yohei Oseki, Ted Briscoe, Timothy Baldwin:
Emergent Word Order Universals from Cognitively-Motivated Language Models. ACL (1) 2024: 14522-14543 - [c24]Taiga Someya, Ryo Yoshida, Yohei Oseki:
Targeted Syntactic Evaluation on the Chomsky Hierarchy. LREC/COLING 2024: 15595-15605 - [i14]Tatsuki Kuribayashi, Ryo Ueda, Ryo Yoshida, Yohei Oseki, Ted Briscoe, Timothy Baldwin:
Emergent Word Order Universals from Cognitively-Motivated Language Models. CoRR abs/2402.12363 (2024) - [i13]Ryo Yoshida, Taiga Someya, Yohei Oseki:
Tree-Planted Transformers: Large Language Models with Implicit Syntactic Supervision. CoRR abs/2402.12691 (2024) - [i12]Kohei Noda, Araki Wakiuchi, Yoshihiro Hayashi, Ryo Yoshida:
Advancing Extrapolative Predictions of Material Properties through Learning to Learn. CoRR abs/2404.08657 (2024) - [i11]Shunya Minami, Yoshihiro Hayashi, Stephen Wu, Kenji Fukumizu, Hiroki Sugisawa, Masashi Ishii, Isao Kuwajima, Kazuya Shiratori, Ryo Yoshida:
Scaling Law of Sim2Real Transfer Learning in Expanding Computational Materials Databases for Real-World Predictions. CoRR abs/2408.04042 (2024) - 2023
- [j25]Mitsuhide Sato, Keigo Takazawa, Ryo Yoshida, Masami Nirei, Tsutomu Mizuno:
Expansion of Motor High-Efficiency Area by Inserting Magnetic Composite Material into Rotor. IEEE Access 11: 34772-34782 (2023) - [j24]Mitsuru Ohno, Yoshihiro Hayashi, Qi Zhang, Yu Kaneko, Ryo Yoshida:
SMiPoly: Generation of a Synthesizable Polymer Virtual Library Using Rule-Based Polymerization Reactions. J. Chem. Inf. Model. 63(17): 5539-5548 (2023) - [c23]Shunya Minami, Kenji Fukumizu, Yoshihiro Hayashi, Ryo Yoshida:
Transfer Learning with Affine Model Transformation. NeurIPS 2023 - 2022
- [j23]Megumi Iwayama, Stephen Wu, Chang Liu, Ryo Yoshida:
Functional Output Regression for Machine Learning in Materials Science. J. Chem. Inf. Model. 62(20): 4837-4851 (2022) - [c22]Ryo Yoshida, Yohei Oseki:
Composition, Attention, or Both? EMNLP (Findings) 2022: 5822-5834 - [i10]Minoru Kusaba, Chang Liu, Ryo Yoshida:
Crystal structure prediction with machine learning-based element substitution. CoRR abs/2201.11188 (2022) - [i9]Qi Zhang, Chang Liu, Stephen Wu, Ryo Yoshida:
Bayesian Sequential Stacking Algorithm for Concurrently Designing Molecules and Synthetic Reaction Networks. CoRR abs/2204.01847 (2022) - [i8]Shunya Minami, Kenji Fukumizu, Yoshihiro Hayashi, Ryo Yoshida:
Transfer learning with affine model transformation. CoRR abs/2210.09745 (2022) - [i7]Ryo Yoshida, Yohei Oseki:
Composition, Attention, or Both? CoRR abs/2210.12958 (2022) - 2021
- [c21]Shunya Minami, Song Liu, Stephen Wu, Kenji Fukumizu, Ryo Yoshida:
A General Class of Transfer Learning Regression without Implementation Cost. AAAI 2021: 8992-8999 - [c20]Tatsuki Kuribayashi, Yohei Oseki, Takumi Ito, Ryo Yoshida, Masayuki Asahara, Kentaro Inui:
Lower Perplexity is Not Always Human-Like. ACL/IJCNLP (1) 2021: 5203-5217 - [c19]Ryo Yoshida, Hiroshi Noji, Yohei Oseki:
Modeling Human Sentence Processing with Left-Corner Recurrent Neural Network Grammars. EMNLP (1) 2021: 2964-2973 - [i6]Tatsuki Kuribayashi, Yohei Oseki, Takumi Ito, Ryo Yoshida, Masayuki Asahara, Kentaro Inui:
Lower Perplexity is Not Always Human-Like. CoRR abs/2106.01229 (2021) - [i5]Ryo Yoshida, Hiroshi Noji, Yohei Oseki:
Modeling Human Sentence Processing with Left-Corner Recurrent Neural Network Grammars. CoRR abs/2109.04939 (2021) - 2020
- [j22]Zhongliang Guo, Stephen Wu, Mitsuru Ohno, Ryo Yoshida:
Bayesian Algorithm for Retrosynthesis. J. Chem. Inf. Model. 60(10): 4474-4486 (2020) - [i4]Zhongliang Guo, Stephen Wu, Mitsuru Ohno, Ryo Yoshida:
A Bayesian algorithm for retrosynthesis. CoRR abs/2003.03190 (2020) - [i3]Shunya Minami, Song Liu, Stephen Wu, Kenji Fukumizu, Ryo Yoshida:
A General Class of Transfer Learning Regression without Implementation Cost. CoRR abs/2006.13228 (2020)
2010 – 2019
- 2019
- [j21]Yumi Kawamura, Shinsuke Koyama, Ryo Yoshida:
Statistical inference of the rate of RNA polymerase II elongation by total RNA sequencing. Bioinform. 35(11): 1877-1884 (2019) - [i2]Minoru Kusaba, Chang Liu, Yukinori Koyama, Kiyoyuki Terakura, Ryo Yoshida:
Recreation of the Periodic Table with an Unsupervised Machine Learning Algorithm. CoRR abs/1912.10708 (2019) - 2018
- [j20]Osamu Hirose, Shotaro Kawaguchi, Terumasa Tokunaga, Yu Toyoshima, Takayuki Teramoto, Sayuri Kuge, Takeshi Ishihara, Yuichi Iino, Ryo Yoshida:
SPF-CellTracker: Tracking Multiple Cells with Strongly-Correlated Moves Using a Spatial Particle Filter. IEEE ACM Trans. Comput. Biol. Bioinform. 15(6): 1822-1831 (2018) - 2017
- [j19]Hisaki Ikebata, Kenta Hongo, Tetsu Isomura, Ryo Maezono, Ryo Yoshida:
Bayesian molecular design with a chemical language model. J. Comput. Aided Mol. Des. 31(4): 379-391 (2017) - 2016
- [j18]Yu Toyoshima, Terumasa Tokunaga, Osamu Hirose, Manami Kanamori, Takayuki Teramoto, Moon Sun Jang, Sayuri Kuge, Takeshi Ishihara, Ryo Yoshida, Yuichi Iino:
Accurate Automatic Detection of Densely Distributed Cell Nuclei in 3D Space. PLoS Comput. Biol. 12(6) (2016) - 2015
- [j17]Hisaki Ikebata, Ryo Yoshida:
Repulsive parallel MCMC algorithm for discovering diverse motifs from large sequence sets. Bioinform. 31(10): 1561-1568 (2015) - [i1]Osamu Hirose, Shotaro Kawaguchi, Terumasa Tokunaga, Yu Toyoshima, Takayuki Teramoto, Sayuri Kuge, Takeshi Ishihara, Yuichi Iino, Ryo Yoshida:
SPF-CellTracker: Tracking multiple cells with strongly-correlated moves using a spatial particle filter. CoRR abs/1508.06464 (2015) - 2014
- [j16]Terumasa Tokunaga, Osamu Hirose, Shotaro Kawaguchi, Yu Toyoshima, Takayuki Teramoto, Hisaki Ikebata, Sayuri Kuge, Takeshi Ishihara, Yuichi Iino, Ryo Yoshida:
Automated detection and tracking of many cells by using 4D live-cell imaging data. Bioinform. 30(12): 43-51 (2014) - [j15]Hiroshi Yamashita, Tomoyuki Higuchi, Ryo Yoshida:
Atom Environment Kernels on Molecules. J. Chem. Inf. Model. 54(5): 1289-1300 (2014) - 2013
- [c18]Ryo Yoshida:
Self-oscillating polymer gels as novel biomimetic materials. EMBC 2013: 318-321 - [c17]Tatsuya Ishikawa, Ryo Yoshida, Keita Takahashi, Hiroshi Inoue, Akira Kobayashi:
A study on EGG affected by viscosity and shear rate dependence of fluid and semi-solid diets. EMBC 2013: 1326-1329 - 2012
- [j14]Shuichi Kawano, Teppei Shimamura, Atsushi Niida, Seiya Imoto, Rui Yamaguchi, Masao Nagasaki, Ryo Yoshida, Cristin G. Print, Satoru Miyano:
Identifying Gene Pathways Associated with Cancer Characteristics via Sparse Statistical Methods. IEEE ACM Trans. Comput. Biol. Bioinform. 9(4): 966-972 (2012) - 2011
- [j13]Yoshinori Tamada, Rui Yamaguchi, Seiya Imoto, Osamu Hirose, Ryo Yoshida, Masao Nagasaki, Satoru Miyano:
SiGN-SSM: open source parallel software for estimating gene networks with state space models. Bioinform. 27(8): 1172-1173 (2011) - 2010
- [j12]Ryo Yoshida, Masaya M. Saito, Hiromichi Nagao, Tomoyuki Higuchi:
Bayesian experts in exploring reaction kinetics of transcription circuits. Bioinform. 26(18) (2010) - [j11]Ryo Yoshida, Mike West:
Bayesian Learning in Sparse Graphical Factor Models via Variational Mean-Field Annealing. J. Mach. Learn. Res. 11: 1771-1798 (2010) - [j10]Ryo Yoshida:
Design of Self-Oscillating Gels and Application to Biomimetic Actuators. Sensors 10(3): 1810-1822 (2010) - [c16]Shuichi Kawano, Teppei Shimamura, Atsushi Niida, Seiya Imoto, Rui Yamaguchi, Masao Nagasaki, Ryo Yoshida, Cristin G. Print, Satoru Miyano:
Discovering functional gene pathways associated with cancer heterogeneity via sparse supervised learning. BIBM 2010: 253-258 - [c15]Keisuke Hayashi, Masaya M. Saito, Ryo Yoshida, Tomoyuki Higuchi:
Implementation of Sequential Importance Sampling in GPGPU. FUSION 2010: 1-6
2000 – 2009
- 2009
- [c14]Yusuke Hara, Shingo Maeda, Ryo Yoshida, Shuji Hashimoto:
Development of novel self-oscillating molecular robot fueled by organic acid. IROS 2009: 2223-2227 - [c13]Shingo Maeda, Yusuke Hara, Ryo Yoshida, Shuji Hashimoto:
Chemical robot-design of peristaltic polymer gel actuator-. IROS 2009: 4325-4330 - [c12]Kazuyuki Nakamura, Ryo Yoshida, Masao Nagasaki, Satoru Miyano, Tomoyuki Higuchi:
Parameter Estimation of In Silico Biological Pathways with Particle Filtering Towards a Petascale Computing. Pacific Symposium on Biocomputing 2009: 227-238 - 2008
- [j9]Shingo Maeda, Yusuke Hara, Ryo Yoshida, Shuji Hashimoto:
Self-Oscillating Gel Actuator for Chemical Robotics. Adv. Robotics 22(12): 1329-1342 (2008) - [j8]Osamu Hirose, Ryo Yoshida, Seiya Imoto, Rui Yamaguchi, Tomoyuki Higuchi, Stephen D. Charnock-Jones, Cristin G. Print, Satoru Miyano:
Statistical inference of transcriptional module-based gene networks from time course gene expression profiles by using state space models. Bioinform. 24(7): 932-942 (2008) - [j7]Ryo Yoshida, Masao Nagasaki, Rui Yamaguchi, Seiya Imoto, Satoru Miyano, Tomoyuki Higuchi:
Bayesian learning of biological pathways on genomic data assimilation. Bioinform. 24(22): 2592-2601 (2008) - [j6]Kazuyuki Numata, Ryo Yoshida, Masao Nagasaki, Ayumu Saito, Seiya Imoto, Satoru Miyano:
ExonMiner: Web service for analysis of GeneChip Exon array data. BMC Bioinform. 9 (2008) - [c11]Osamu Hirose, Ryo Yoshida, Rui Yamaguchi, Seiya Imoto, Tomoyuki Higuchi, Satoru Miyano:
Analyzing Time Course Gene Expression Data with Biological and Technical Replicates to Estimate Gene Networks by State Space Models. Asia International Conference on Modelling and Simulation 2008: 940-946 - [c10]Ryo Yoshida, Michiaki Yasumura:
A New Cell Phone Remote Control for People with Visual Impairment. ICCHP 2008: 1145-1152 - 2007
- [j5]Rui Yamaguchi, Ryo Yoshida, Seiya Imoto, Tomoyuki Higuchi, Satoru Miyano:
Finding module-based gene networks with state-space models - Mining high-dimensional and short time-course gene expression data. IEEE Signal Process. Mag. 24(1): 37-46 (2007) - [c9]Ryo Yoshida, Kazuyuki Numata, Seiya Imoto, Masao Nagasaki, Atsushi Doi, Kazuko Ueno, Satoru Miyano:
Computational Genome-Wide Discovery of Aberrant Splice Variations with Exon Expression Profiles. BIBE 2007: 715-722 - [c8]Shingo Maeda, Yusuke Hara, Ryo Yoshida, Shuji Hashimoto:
Chemical robot - Design of self-walking gel. IROS 2007: 2150-2155 - [c7]Pramod K. Gupta, Ryo Yoshida, Seiya Imoto, Rui Yamaguchi, Satoru Miyano:
Statistical Absolute Evaluation of Gene Ontology Terms with Gene Expression Data. ISBRA 2007: 146-157 - 2006
- [j4]Ryo Yoshida, Tomoyuki Higuchi, Seiya Imoto, Satoru Miyano:
ArrayCluster: an analytic tool for clustering, data visualization and module finder on gene expression profiles. Bioinform. 22(12): 1538-1539 (2006) - [c6]Michiaki Yasumura, Ryo Yoshida, Megumi Yoshida:
Prototyping and Evaluation of New Remote Controls for People with Visual Impairment. ICCHP 2006: 461-468 - 2005
- [c5]Ryo Yoshida, Seiya Imoto, Tomoyuki Higuchi:
Estimating Time-Dependent Gene Networks from Time Series Microarray Data by Dynamic Linear Models with Markov Switching. CSB 2005: 289-298 - [c4]Ryo Yoshida, Seiya Imoto, Tomoyuki Higuchi:
A Penalized Likelihood Estimation on Transcriptional Module-Based Clustering. ICCSA (3) 2005: 389-401 - 2004
- [c3]Ryo Yoshida, Tomoyuki Higuchi, Seiya Imoto:
A Mixed Factors Model for Dimension Reduction and Extraction of a Group Structure in Gene Expression Data. CSB 2004: 161-172 - [c2]Shingo Maeda, Shuji Hashimoto, Ryo Yoshida:
Design of chemo-mechanical actuator using self-oscillating gel. ROBIO 2004: 474-479 - 2000
- [j3]Ryo Yoshida, Takaaki Murao, Tatsuo Miyazawa:
3D web environment for knowledge management. Future Gener. Comput. Syst. 17(1): 73-78 (2000)
1990 – 1999
- 1998
- [c1]Ryo Yoshida, Carmine F. Greco:
Reactive Virtual Environment System: LivingWorlds multi-user world. EGVE 1998: 204-215 - 1996
- [j2]Ryutarou Ohbuchi, Tatsuo Miyazawa, Masaki Aono, Akio Koide, Masahiko Kimura, Ryo Yoshida:
Integrated medical-image system for cancer research and treatment. IBM J. Res. Dev. 40(2): 185-210 (1996) - 1993
- [j1]Ryo Yoshida, Tatsuo Miyazawa, Akio Doi, Taisuke Otsuki:
Clinical planning support system-CliPSS. IEEE Computer Graphics and Applications 13(6): 76-84 (1993)
Coauthor Index
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from 
to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the 
of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from 
, 
, and 
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from 
.
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2025-01-09 13:08 CET by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by:
