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ORCIDJournal of Biomedical Informatics, Volume 37
Volume 37, Number 1, February 2004
- Luis Alberto Carvalho:
A simple and effective algorithm for detection of arbitrary Hartmann-Shack patterns. 1-9 - Axel Wismüller, Anke Meyer-Bäse
, Oliver Lange, Dorothee Auer, Maximilian F. Reiser, DeWitt Sumners:
Model-free functional MRI analysis based on unsupervised clustering. 10-18 - Brian E. Chapman, Dennis L. Parker, Janet O. Stapelton, Jay S. Tsuruda, Claudia Mello-Thoms, Bronwin Hamilton, Gregory L. Katzman, Kevin Moore:
Diagnostic fidelity of the Z-buffer segmentation algorithm: preliminary assessment based on intracranial aneurysm detection. 19-29 - Fernando Martín-Sánchez, Ilias Iakovidis, S. Nørager, Victor Maojo, Piet C. de Groen, Johan van der Lei, T. Jones, Klaus Abraham-Fuchs, Rolf Apweiler, Ankica Babic:
Synergy between medical informatics and bioinformatics: facilitating genomic medicine for future health care. 30-42 - Andrey Rzhetsky, Ivan Iossifov, Tomohiro Koike, Michael Krauthammer, Pauline Kra, Mitzi Morris, Hong Yu, Pablo Ariel Duboué, Wubin Weng, W. John Wilbur:
GeneWays: a system for extracting, analyzing, visualizing, and integrating molecular pathway data. 43-53 - Paul Pavlidis:
Book Review. 54-55 - André Kushniruk, Vimla L. Patel:
Cognitive and usability engineering methods for the evaluation of clinical information systems. 56-76
Volume 37, Number 2, April 2004
- Jorge E. Caviedes, James J. Cimino:
Towards the development of a conceptual distance metric for the UMLS. 77-85 - Paul R. Falzer:
Cognitive schema and naturalistic decision making in evidence-based practices. 86-98 - Santiago Aja-Fernández, Rodrigo de Luis García, Miguel Ángel Martín-Fernández, Carlos Alberola-López:
A computational TW3 classifier for skeletal maturity assessment. A Computing with Words approach. 99-107 - Ida Sim, Ben Olasov, Simona Carini:
An ontology of randomized controlled trials for evidence-based practice: content specification and evaluation using the competency decomposition method. 108-119 - Wendy Webber Chapman, John N. Dowling, Michael M. Wagner:
Fever detection from free-text clinical records for biosurveillance. 120-127 - Wanda Pratt, Madhu C. Reddy, David W. McDonald, Peter Tarczy-Hornoch, John H. Gennari:
Incorporating ideas from computer-supported cooperative work. 128-137
Volume 37, Number 3, June 2004
- Donald Gardner:
Using genomics to help predict drug interactions. 139-146 - Aziz A. Boxwala, Mor Peleg, Samson W. Tu, Omolola Ogunyemi, Qing T. Zeng, Dongwen Wang, Vimla L. Patel, Robert A. Greenes, Edward H. Shortliffe:
GLIF3: a representation format for sharable computer-interpretable clinical practice guidelines. 147-161 - Yao Sun:
Methods for automated concept mapping between medical databases. 162-178 - Bradley A. Malin, Latanya Sweeney:
How (not) to protect genomic data privacy in a distributed network: using trail re-identification to evaluate and design anonymity protection systems. 179-192 - Jiajie Zhang, Vimla L. Patel, Todd R. Johnson, Edward H. Shortliffe:
A cognitive taxonomy of medical errors. 193-204 - Konstantinos Karasavvas, Richard A. Baldock, Albert Burger:
Bioinformatics integration and agent technology. 205-219
Volume 37, Number 4, August 2004
- Lucila Ohno-Machado:
Research on machine learning issues in biomedical informatics modeling. 221-223 - Predrag Radivojac, Nitesh V. Chawla, A. Keith Dunker, Zoran Obradovic:
Classification and knowledge discovery in protein databases. 224-239 - Fei Pan, Baoying Wang, Xin Hu, William Perrizo:
Comprehensive vertical sample-based KNN/LSVM classification for gene expression analysis. 240-248 - Xiaobo Zhou, Kuang-Yu Liu, Stephen T. C. Wong:
Cancer classification and prediction using logistic regression with Bayesian gene selection. 249-259 - Ju Han Kim, Dooil Jeoung, Seongeun Lee, Hyeouneui Kim:
Discovering significant and interpretable patterns from multifactorial DNA microarray data with poor replication. 260-268 - Dragan Gamberger, Nada Lavrac, Filip Zelezný, Jakub Tolar:
Induction of comprehensible models for gene expression datasets by subgroup discovery methodology. 269-284 - Richard Butterworth, Dan A. Simovici, Gustavo S. Santos, Lucila Ohno-Machado:
A greedy algorithm for supervised discretization. 285-292 - Winston Patrick Kuo, Eun-Young Kim, Jeff Trimarchi, Tor-Kristian Jenssen, Staal Amund Vinterbo, Lucila Ohno-Machado:
A primer on gene expression and microarrays for machine learning researchers. 293-303
Volume 37, Number 5, October 2004
- Dongwen Wang, Mor Peleg, Samson W. Tu, Aziz A. Boxwala, Omolola Ogunyemi, Qing T. Zeng, Robert A. Greenes, Vimla L. Patel, Edward H. Shortliffe:
Design and implementation of the GLIF3 guideline execution engine. 305-318 - Roy Rada, Scott Finley:
The aging of a clinical information system. 319-324 - Yuval Shahar, Ohad Young, Erez Shalom, Maya Galperin, Alon Mayaffit, Robert Moskovitch, Alon Hessing:
A framework for a distributed, hybrid, multiple-ontology clinical-guideline library, and automated guideline-support tools. 325-344 - Kevin Y. Yip, David W. Cheung, Michael K. Ng, Kei-Hoi Cheung:
Identifying projected clusters from gene expression profiles. 345-357 - Qihua Tan, Klaus Brusgaard, Torben Arvid Kruse, Edward J. Oakeley, Brian A. Hemmings, Henning Beck-Nielsen, Lars Hansen, Michael Gaster:
Correspondence analysis of microarray time-course data in case-control design. 358-365 - Ray L. Somorjai, Brion Dolenko, Aleksander B. Demko, Marina Mandelzweig, Aleksander E. Nikulin, Richard Baumgartner, Nicolino J. Pizzi:
Mapping high-dimensional data onto a relative distance plane - an exact method for visualizing and characterizing high-dimensional patterns. 366-379 - Tim W. Nattkemper:
Multivariate image analysis in biomedicine. 380-391
Volume 37, Number 6, December 2004
- Sophia Ananiadou, Carol Friedman, Jun'ichi Tsujii:
Introduction: named entity recognition in biomedicine. 393-395 - Alexander A. Morgan, Lynette Hirschman, Marc E. Colosimo, Alexander S. Yeh, Jeffrey B. Colombe:
Gene name identification and normalization using a model organism database. 396-410 - Jie Zhang, Dan Shen, Guodong Zhou, Jian Su, Chew Lim Tan:
Enhancing HMM-based biomedical named entity recognition by studying special phenomena. 411-422 - Nigel Collier, Koichi Takeuchi:
Comparison of character-level and part of speech features for name recognition in biomedical texts. 423-435 - Ki-Joong Lee, Young-Sook Hwang, Seonho Kim, Hae-Chang Rim:
Biomedical named entity recognition using two-phase model based on SVMs. 436-447 - Wen-Juan Hou, Hsin-Hsi Chen:
Enhancing performance of protein and gene name recognizers with filtering and integration strategies. 448-460 - Yoshimasa Tsuruoka, Jun'ichi Tsujii:
Improving the performance of dictionary-based approaches in protein name recognition. 461-470 - Kaoru Yamamoto, Taku Kudo, Akihiko Konagaya, Yuji Matsumoto:
Use of morphological analysis in protein name recognition. 471-482 - Irena Spasic, Sophia Ananiadou:
Using automatically learnt verb selectional preferences for classification of biomedical terms. 483-497 - Manabu Torii, Sachin Kamboj, K. Vijay-Shanker:
Using name-internal and contextual features to classify biological terms. 498-511 - Michael Krauthammer, Goran Nenadic:
Term identification in the biomedical literature. 512-526
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