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ORCIDMarco Ramoni
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- affiliation: Harvard University, Cambridge, USA
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Journal Articles
- 2012
[j26]Hsun-Hsien Chang, Kelly Soderberg, Jason A. Skinner, Jacques Banchereau, Damien Chaussabel
, Barton F. Haynes, Marco Ramoni, Norman L. Letvin:
Transcriptional network predicts viral set point during acute HIV-1 infection. J. Am. Medical Informatics Assoc. 19(6): 1103-1109 (2012)- 2011
- [j25]Fulvia Ferrazzi, Felix B. Engel, Erxi Wu, Annie P. Moseman, Isaac S. Kohane, Riccardo Bellazzi, Marco Ramoni:
Inferring cell cycle feedback regulation from gene expression data. J. Biomed. Informatics 44(4): 565-575 (2011) - [j24]Hsun-Hsien Chang, Marco Ramoni:
Inferring Nonstationary Gene Networks from Longitudinal Gene Expression Microarrays. J. Signal Process. Syst. 65(2): 261-273 (2011) - 2010
- [j23]Gil Alterovitz, Taro Muso, Marco Ramoni:
The challenges of informatics in synthetic biology: from biomolecular networks to artificial organisms. Briefings Bioinform. 11(1): 80-95 (2010) - [j22]Hsun-Hsien Chang, Michael J. McGeachie, Gil Alterovitz, Marco Ramoni:
Mapping transcription mechanisms from multimodal genomic data. BMC Bioinform. 11(S-9): S2 (2010) - [j21]Olgica Milenkovic, Gil Alterovitz, Gerard Battail, Todd P. Coleman, Joachim Hagenauer, Sean P. Meyn, Nathan D. Price, Marco Ramoni, Ilya Shmulevich, Wojciech Szpankowski:
Introduction to the special issue on information theory in molecular biology and neuroscience. IEEE Trans. Inf. Theory 56(2): 649-652 (2010) - 2009
- [j20]Atul J. Butte, Indra Neil Sarkar, Marco Ramoni, Yves A. Lussier, Olga G. Troyanskaya:
Selected proceedings of the First Summit on Translational Bioinformatics 2008. BMC Bioinform. 10(S-2) (2009) - [j19]Hsun-Hsien Chang, Marco Ramoni:
Transcriptional network classifiers. BMC Bioinform. 10(S-9): 1 (2009) - [j18]Blanca E. Himes, Yi Dai, Isaac S. Kohane, Scott T. Weiss, Marco Ramoni:
Research Paper: Prediction of Chronic Obstructive Pulmonary Disease (COPD) in Asthma Patients Using Electronic Medical Records. J. Am. Medical Informatics Assoc. 16(3): 371-379 (2009) - [j17]Sangeeta B. English, Shou-Ching Shih, Marco Ramoni, Lois E. Smith, Atul J. Butte:
Use of Bayesian networks to probabilistically model and improve the likelihood of validation of microarray findings by RT-PCR. J. Biomed. Informatics 42(2): 287-295 (2009) - 2008
- [j16]Gil Alterovitz, Adnaan Jiwaji, Marco Ramoni:
Automated programming for bioinformatics algorithm deployment. Bioinform. 24(3): 450-451 (2008) - 2007
- [j15]Fulvia Ferrazzi, Paola Sebastiani, Marco Ramoni, Riccardo Bellazzi:
Bayesian approaches to reverse engineer cellular systems: a simulation study on nonlinear Gaussian networks. BMC Bioinform. 8(S-5) (2007) - [j14]Gil Alterovitz, Michael Xiang, Mamta Mohan, Marco Ramoni:
GO PaD: the Gene Ontology Partition Database. Nucleic Acids Res. 35(Database-Issue): 322-327 (2007) - [j13]Gil Alterovitz, Marco Ramoni:
Bioinformatics and Proteomics: An Engineering Problem Solving-Based Approach. IEEE Trans. Educ. 50(1): 49-54 (2007) - [j12]Gil Alterovitz, Marco Ramoni:
Erratum to "Bioinformatics and Proteomics: An Engineering Problem Solving-Based Approach". IEEE Trans. Educ. 50(2): 170 (2007) - 2006
- [j11]Gil Alterovitz, Vinayak Muralidhar, Marco Ramoni:
Gene Lethality Detection and Characterization via Topological Analysis of Regulatory Networks. IEEE Trans. Circuits Syst. I Regul. Pap. 53-I(11): 2438-2443 (2006) - 2005
- [j10]Ling Wang, Marco Ramoni, Kenneth D. Mandl, Paola Sebastiani:
Factors affecting automated syndromic surveillance. Artif. Intell. Medicine 34(3): 269-278 (2005) - 2003
- [j9]Paola Sebastiani, Isaac S. Kohane, Marco Ramoni:
Editorial: Methods in Functional Genomics. Mach. Learn. 52(1-2): 5-9 (2003) - 2002
- [j8]Marco Ramoni, Paola Sebastiani, Paul R. Cohen:
Bayesian Clustering by Dynamics. Mach. Learn. 47(1): 91-121 (2002) - 2001
- [j7]Marco Ramoni, Paola Sebastiani:
Robust Bayes classifiers. Artif. Intell. 125(1-2): 209-226 (2001) - [j6]Marco Ramoni, Paola Sebastiani:
Robust Learning with Missing Data. Mach. Learn. 45(2): 147-170 (2001) - 2000
- [j5]Paola Sebastiani, Marco Ramoni, Alexander Crea:
Profiling your Customers using Bayesian Networks. SIGKDD Explor. 1(2): 91-96 (2000) - 1998
- [j4]Marco Ramoni, Paola Sebastiani:
Parameter Estimation in Bayesian Networks from Incomplete Databases. Intell. Data Anal. 2(1-4): 139-160 (1998) - 1996
- [j3]Alberto Riva, Marco Ramoni:
LispWeb: A Specialized HTTP Server for Distributed AI Applications. Comput. Networks 28(7-11): 953-961 (1996) - 1995
- [j2]Marco Ramoni, Alberto Riva, Mario Stefanelli, Vimla L. Patel:
An ignorant belief network to forecast glucose concentration from clinical databases. Artif. Intell. Medicine 7(6): 541-559 (1995) - 1992
- [j1]Marco Ramoni, Mario Stefanelli, Lorenzo Magnani, Giovanni Barosi:
An epistemological framework for medical knowledge-based systems. IEEE Trans. Syst. Man Cybern. 22(6): 1361-1375 (1992)
Conference and Workshop Papers
- 2011
- [c28]Amin Zollanvari, Nancy L. Saccone, Laura J. Bierut, Marco Ramoni, Gil Alterovitz:
Is the reduction of dimensionality to a small number of features always necessary in constructing predictive models for analysis of complex diseases or behaviours? EMBC 2011: 3573-3576 - [c27]Gil Alterovitz, Silvio Cavalcanti, Taro Muso, Marco Ramoni, May Wang:
Session Introduction. Pacific Symposium on Biocomputing 2011: 300-301 - 2010
- [c26]Gil Alterovitz, Silvio Cavalcanti, Taro Muso, Marco Ramoni, May Wang:
Session Introduction. Pacific Symposium on Biocomputing 2010: 383-384 - 2009
- [c25]Hsun-Hsien Chang, Marco Ramoni:
Robust cross-race gene expression analysis. ICASSP 2009: 505-508 - [c24]Gil Alterovitz, Judith A. Blake, Jonathan M. Dreyfuss, Drew Endy, Marco Ramoni:
Session Introduction. Pacific Symposium on Biocomputing 2009: 1-3 - 2008
- [c23]Blanca E. Himes, Isaac S. Kohane, Marco Ramoni, Scott T. Weiss:
Characterization of Patients who Suffer Asthma Exacerbations using Data Extracted from Electronic Medical Records. AMIA 2008 - [c22]Gil Alterovitz, Michael Xiang, Jonathan Liu, Amelia Chang, Marco Ramoni:
System-Wide Peripheral Biomarker Discovery Using Information Theory. Pacific Symposium on Biocomputing 2008: 231-242 - 2007
- [c21]Gil Alterovitz, Eugenia Lyashenko, Michael Xiang, Marco Ramoni:
Linking Protein Mass with Function via Organismal Massome Networks. BIBE 2007: 59-65 - [c20]Gil Alterovitz, Taro Muso, Paresh Malalur, Marco Ramoni:
A Systematic Approach to Quantifying Evolutionary Functional Trends Across the Universal Tree of Life. BIBE 2007: 374-378 - [c19]Marco Ramoni:
Statistical Mechanics of Biological Networks. UAI 2007: 482-483 - 2006
- [c18]Gil Alterovitz, Marco Ramoni:
Discovering Biological Guilds through Topological Abstraction. AMIA 2006 - [c17]Fulvia Ferrazzi, Paola Sebastiani, Isaac S. Kohane, Marco Ramoni, Riccardo Bellazzi:
Dynamic Bayesian Networks in Modelling Cellular Systems: a Critical Appraisal on Simulated Data. CBMS 2006: 544-549 - [c16]Ling Wang, Marco Ramoni, Paola Sebastiani:
Clustering Short Gene Expression Profiles. RECOMB 2006: 60-68 - 2001
- [c15]Paola Sebastiani, Marco Ramoni:
Clustering Continuous Time Series. ICML 2001: 497-504 - [c14]Paola Sebastiani, Marco Ramoni, Paul R. Cohen:
Sequence Learning via Bayesian Clustering by Dynamics. Sequence Learning 2001: 11-34 - 2000
- [c13]Marco Ramoni, Paola Sebastiani, Paul R. Cohen:
Multivariate Clustering by Dynamics. AAAI/IAAI 2000: 633-638 - [c12]Marco Ramoni, Paola Sebastiani, Paul R. Cohen:
Unsupervised clustering of robot activities: a Bayesian approach. Agents 2000: 134-135 - 1999
- [c11]Marco Ramoni, Paola Sebastiani:
Learning conditional probabilities from incomplete databases - An experimental comparison. AISTATS 1999 - [c10]Paola Sebastiani, Marco Ramoni:
Model folding for data subject to nonresponse. AISTATS 1999 - [c9]Paola Sebastiani, Marco Ramoni, Paul R. Cohen, John Warwick, James Davis:
Discovering Dynamics Using Bayesian Clustering. IDA 1999: 199-210 - 1998
- [c8]Paola Sebastiani, Marco Ramoni:
Induction of Graphical Models from Incomplete Samples. COMPSTAT 1998: 449-454 - [c7]Paola Sebastiani, Marco Ramoni:
Decision Theoretic Foundations of Graphical Model Selection. UAI 1998: 464-471 - 1997
- [c6]Marco Ramoni, Paola Sebastiani:
Robust Parameter Learning in Bayesian Networks with Missing Data. AISTATS 1997: 399-406 - [c5]Marco Ramoni, Paola Sebastiani:
The Use of Exogenous Knowledge to Learn Bayesian Networks from Incomplete Databases. IDA 1997: 537-548 - [c4]Marco Ramoni, Paola Sebastiani:
Learning Bayesian Networks from Incomplete Databases. UAI 1997: 401-408 - 1995
- [c3]Marco Ramoni, Alberto Riva, Mario Stefanelli, Vimla L. Patel:
Medical Decision Making Using Ignorant Influence Diagrams. AIME 1995: 139-150 - [c2]Marco Ramoni:
Ignorant Influence Diagrams. IJCAI 1995: 1869-1877 - 1994
- [c1]Marco Ramoni, Alberto Riva:
Belief Maintenance in Bayesian Networks. UAI 1994: 498-505
Parts in Books or Collections
- 2010
- [p2]Paola Sebastiani, María M. Abad-Grau, Marco Ramoni:
Bayesian Networks. Data Mining and Knowledge Discovery Handbook 2010: 175-208 - 2005
- [p1]Paola Sebastiani, María M. Abad-Grau, Marco Ramoni:
Bayesian Networks. The Data Mining and Knowledge Discovery Handbook 2005: 193-230
Reference Works
- 2009
- [r1]Marco Ramoni, Paola Sebastiani:
Learning Bayesian Networks. Encyclopedia of Data Warehousing and Mining 2009: 1124-1128
Informal and Other Publications
- 2013
- [i3]Paola Sebastiani, Marco Ramoni:
Decision Theoretic Foundations of Graphical Model Selection. CoRR abs/1301.7410 (2013) - [i2]Marco Ramoni, Paola Sebastiani:
Learning Bayesian Networks from Incomplete Databases. CoRR abs/1302.1565 (2013) - [i1]Marco Ramoni, Alberto Riva:
Belief Maintenance in Bayesian Networks. CoRR abs/1302.6841 (2013)
Coauthor Index
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