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ORCIDPiotr Formanowicz
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- affiliation: Poznan University of Technology, Poland
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2020 – today
- 2024
[j38]Kaja Gutowska
, Piotr Formanowicz:
Searching for significant reactions and subprocesses in models of biological systems based on Petri nets. Comput. Biol. Medicine 168: 107729 (2024)- [j37]Marcin Radom, Agnieszka Rybarczyk, Igor Piekarz, Piotr Formanowicz:
Algorithms for evaluation of minimal cut sets. J. Biomed. Informatics 159: 104740 (2024) - [i2]Salim Janji, Piotr Wawrzyniak, Piotr Formanowicz, Adrian Kliks:
Integrating UAV-Enabled Base Stations in 3D Networks: QoS-Aware Joint Fronthaul and Backhaul Design. CoRR abs/2404.17547 (2024) - [i1]Marcin Radom, Piotr Formanowicz:
Extended time Petri nets. CoRR abs/2405.09208 (2024) - 2022
- [j36]Bartlomiej Szawulak, Marcin Radom, Piotr Formanowicz:
Comparing Petri net-based models of biological systems using Holmes. Bioinform. 38(19): 4652-4653 (2022) - [j35]Kaja Gutowska, Piotr Formanowicz:
On anti-occurrence of subsets of transitions in Petri net-based models of complex biological systems. Biosyst. 222: 104793 (2022) - 2020
- [c5]Kaja Gutowska, Dorota Formanowicz, Piotr Formanowicz:
Systems Approach Based on Petri Nets as a Method for Modeling and Analysis of Complex Biological Systems Presented on the Example of Atherosclerosis Development Process. KKA 2020: 579-586
2010 – 2019
- 2019
- [j34]Adam Kozak, Tomasz Glowacki, Piotr Formanowicz:
A method for constructing artificial DNA libraries based on generalized de Bruijn sequences. Discret. Appl. Math. 259: 127-144 (2019) - 2018
- [j33]Dorota Formanowicz, Marcin Radom, Agnieszka Rybarczyk, Piotr Formanowicz:
The role of Fenton reaction in ROS-induced toxicity underlying atherosclerosis - modeled and analyzed using a Petri net-based approach. Biosyst. 165: 71-87 (2018) - [j32]Dorota Formanowicz, Agnieszka Rybarczyk, Piotr Formanowicz:
Factors Influencing Essential Hypertension and Cardiovascular Disease Modeled and Analyzed using Stochastic Petri Nets. Fundam. Informaticae 160(1-2): 143-165 (2018) - 2017
- [j31]Marcin Radom, Agnieszka Rybarczyk, Bartlomiej Szawulak, Hubert Andrzejewski, Piotr Chabelski, Adam Kozak, Piotr Formanowicz:
Holmes: a graphical tool for development, simulation and analysis of Petri net based models of complex biological systems. Bioinform. 33(23): 3822-3823 (2017) - 2016
- [j30]Kamil Kwarciak, Marcin Radom, Piotr Formanowicz:
A multilevel ant colony optimization algorithm for classical and isothermic DNA sequencing by hybridization with multiplicity information available. Comput. Biol. Chem. 61: 109-120 (2016) - 2014
- [j29]Kamil Kwarciak, Piotr Formanowicz:
Tabu search algorithm for DNA sequencing by hybridization with multiplicity information available. Comput. Oper. Res. 47: 1-10 (2014) - 2013
- [j28]Adam Kozak, Tomasz Glowacki, Piotr Formanowicz:
On a generalized model of labeled graphs. Discret. Appl. Math. 161(13-14): 1818-1827 (2013) - [j27]Dorota Formanowicz, Adam Kozak, Tomasz Glowacki, Marcin Radom, Piotr Formanowicz:
Hemojuvelin-hepcidin axis modeled and analyzed using Petri nets. J. Biomed. Informatics 46(6): 1030-1043 (2013) - 2012
- [j26]Piotr Formanowicz, Krzysztof Tanas:
The Fan-Raspaud conjecture: A randomized algorithmic approach and application to the pair assignment problem in cubic networks. Int. J. Appl. Math. Comput. Sci. 22(3): 765-778 (2012) - [j25]Marcin Radom, Agnieszka Rybarczyk, Renzo Kottmann, Piotr Formanowicz, Marta Szachniuk, Frank Oliver Glöckner, Dietrich Rebholz-Schuhmann, Jacek Blazewicz:
Poseidon: An information retrieval and extraction system for metagenomic marine science. Ecol. Informatics 12: 10-15 (2012) - 2011
- [j24]Jacek Blazewicz, Piotr Formanowicz, Pawel Kedziora, Pawel Marciniak, Przemyslaw Taront:
Adaptive memory programming: local search parallel algorithms for phylogenetic tree construction. Ann. Oper. Res. 183(1): 75-94 (2011) - 2010
- [j23]Szymon Wasik, Paulina Jackowiak, Jacek B. Krawczyk, Pawel Kedziora, Piotr Formanowicz, Marek Figlerowicz, Jacek Blazewicz:
Towards Prediction of HCV Therapy Efficiency. Comput. Math. Methods Medicine 2010(2): 185-199 (2010) - [j22]Jacek Blazewicz, Marcin Borowski, Piotr Formanowicz, Tomasz Glowacki:
Genetic and Tabu search algorithms for peptide assembly problem. RAIRO Oper. Res. 44(2): 153-166 (2010)
2000 – 2009
- 2009
- [j21]Jacek Blazewicz, Piotr Formanowicz, Pawel Wojciechowski:
Some remarks on evaluating the quality of the multiple sequence alignment based on the BAliBASE benchmark. Int. J. Appl. Math. Comput. Sci. 19(4): 675-678 (2009) - [j20]Andrea Sackmann, Dorota Formanowicz, Piotr Formanowicz, Jacek Blazewicz:
New insights into the human body iron metabolism analyzed by a Petri net based approach. Biosyst. 96(1): 104-113 (2009) - [j19]Jacek Blazewicz, Dorota Formanowicz, Piotr Formanowicz, Andrea Sackmann, Michal Sajkowski:
Modeling the process of human body iron homeostasis using a variant of timed Petri nets. Discret. Appl. Math. 157(10): 2221-2231 (2009) - 2007
- [j18]Andrea Sackmann, Dorota Formanowicz, Piotr Formanowicz, Ina Koch, Jacek Blazewicz:
An analysis of the Petri net based model of the human body iron homeostasis process. Comput. Biol. Chem. 31(1): 1-10 (2007) - [j17]Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak, Petra Schuurman, Gerhard J. Woeginger:
A polynomial time equivalence between DNA sequencing and the exact perfect matching problem. Discret. Optim. 4(2): 154-162 (2007) - [j16]Dorota Formanowicz, Andrea Sackmann, Piotr Formanowicz, Jacek Blazewicz:
Petri net based model of the body iron homeostasis. J. Biomed. Informatics 40(5): 476-485 (2007) - 2005
- [j15]Jacek Blazewicz, Piotr Formanowicz:
Multistage isothermic sequencing by hybridization. Comput. Biol. Chem. 29(1): 69-77 (2005) - [j14]Cherif Sadfi, Bernard Penz, Christophe Rapine, Jacek Blazewicz, Piotr Formanowicz:
An improved approximation algorithm for the single machine total completion time scheduling problem with availability constraints. Eur. J. Oper. Res. 161(1): 3-10 (2005) - [j13]Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak:
Selected combinatorial problems of computational biology. Eur. J. Oper. Res. 161(3): 585-597 (2005) - [c4]Jacek Blazewicz, Marcin Borowski, Piotr Formanowicz, Maciej Stobiecki:
Tabu Search Method for Determining Sequences of Amino Acids in Long Polypeptides. EvoWorkshops 2005: 22-32 - 2004
- [j12]Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak, Wojciech T. Markiewicz, Aleksandra Swiercz:
Tabu search algorithm for DNA sequencing by hybridization with isothermic libraries. Comput. Biol. Chem. 28(1): 11-19 (2004) - [j11]Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak, Wojciech T. Markiewicz:
Sequencing by hybridization with isothermic oligonucleotide libraries. Discret. Appl. Math. 145(1): 40-51 (2004) - [j10]Ryszard W. Adamiak, Jacek Blazewicz, Piotr Formanowicz, Zofia Gdaniec, Marta Kasprzak, Mariusz Popenda, Marta Szachniuk:
An Algorithm for an Automatic NOE Pathways Analysis of 2D NMR Spectra of RNA Duplexes. J. Comput. Biol. 11(1): 163-179 (2004) - 2003
- [c3]Jacek Blazewicz, Piotr Formanowicz, Radoslaw Urbaniak:
DNA Based Algorithms for Some Scheduling Problems. EvoWorkshops 2003: 673-683 - [c2]Jacek Blazewicz, Piotr Formanowicz, Pawel Kedziora, Pawel Wojciechowski:
Parallel Algorithms for Evolutionary History Reconstruction. PPAM 2003: 1138-1145 - 2002
- [j9]Jacek Blazewicz, Piotr Formanowicz, Frédéric Guinand, Marta Kasprzak:
A heuristic managing errors for DNA sequencing. Bioinform. 18(5): 652-660 (2002) - [j8]Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak, Daniel Kobler:
On the recognition of de Bruijn graphs and their induced subgraphs. Discret. Math. 245(1-3): 81-92 (2002) - [j7]Wieslaw Kubiak, Jacek Blazewicz, Piotr Formanowicz, Joachim Breit, Günter Schmidt:
Two-machine flow shops with limited machine availability. Eur. J. Oper. Res. 136(3): 528-540 (2002) - [j6]Jacek Blazewicz, Piotr Formanowicz:
Scheduling jobs in open shops with limited machine availability. RAIRO Oper. Res. 36(2): 149-156 (2002) - [c1]Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak, Petra Schuurman, Gerhard J. Woeginger:
DNA Sequencing, Eulerian Graphs, and the Exact Perfect Matching Problem. WG 2002: 13-24 - 2001
- [j5]Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak, Marcin Jaroszewski, Wojciech T. Markiewicz:
Construction of DNA restriction maps based on a simplified experiment. Bioinform. 17(5): 398-404 (2001) - [j4]Marie-Laure Espinouse, Piotr Formanowicz, Bernard Penz:
Complexity results and approximation algorithms for the two machine no-wait flow-shop with limited machine availability. J. Oper. Res. Soc. 52(1): 116-121 (2001) - 2000
- [j3]Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak, Wojciech T. Markiewicz, Jan Weglarz:
Tabu search for DNA sequencing with false negatives and false positives. Eur. J. Oper. Res. 125(2): 257-265 (2000) - [j2]Jacek Blazewicz, Maciej Drozdowski, Piotr Formanowicz, Wieslaw Kubiak, Günter Schmidt:
Scheduling preemptable tasks on parallel processors with limited availability. Parallel Comput. 26(9): 1195-1211 (2000)
1990 – 1999
- 1999
- [j1]Jacek Blazewicz, Piotr Formanowicz, Marta Kasprzak, Wojciech T. Markiewicz, Jan Weglarz:
DNA Sequencing With Positive and Negative Errors. J. Comput. Biol. 6(1): 113-123 (1999)
Coauthor Index
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