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ORCIDHanspeter Herzel
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Journal Articles
- 2019
[j27]Christoph Schmal
, Daisuke Ono, Jihwan Myung, J. Patrick Pett, Sato Honma, Ken-ichi Honma, Hanspeter Herzel, Isao T. Tokuda:
Weak coupling between intracellular feedback loops explains dissociation of clock gene dynamics. PLoS Comput. Biol. 15(9) (2019)- 2018
- [j26]Isao T. Tokuda, Daisuke Ono, Sato Honma, Ken-ichi Honma, Hanspeter Herzel:
Coherency of circadian rhythms in the SCN is governed by the interplay of two coupling factors. PLoS Comput. Biol. 14(12) (2018) - 2017
- [j25]Christoph Schmal, Jihwan Myung, Hanspeter Herzel, Grigory V. Bordyugov:
Moran's I quantifies spatio-temporal pattern formation in neural imaging data. Bioinform. 33(19): 3072-3079 (2017) - 2016
- [j24]J. Patrick Pett, Anja Korencic, Felix Wesener, Achim Kramer, Hanspeter Herzel:
Feedback Loops of the Mammalian Circadian Clock Constitute Repressilator. PLoS Comput. Biol. 12(12) (2016) - 2015
- [j23]Anuprabha Bhargava, Hanspeter Herzel, Bharath Ananthasubramaniam:
Mining for novel candidate clock genes in the circadian regulatory network. BMC Syst. Biol. 9: 78 (2015) - 2014
- [j22]Willi Gottstein, Stefan Müller, Hanspeter Herzel, Ralf Steuer:
Elucidating the adaptation and temporal coordination of metabolic pathways using in-silico evolution. Biosyst. 117: 68-76 (2014) - [j21]Bharath Ananthasubramaniam, Erik D. Herzog, Hanspeter Herzel:
Timing of Neuropeptide Coupling Determines Synchrony and Entrainment in the Mammalian Circadian Clock. PLoS Comput. Biol. 10(4) (2014) - 2011
- [j20]Angela Relógio, Pål O. Westermark, Thomas Wallach, Katja Schellenberg, Achim Kramer, Hanspeter Herzel:
Tuning the Mammalian Circadian Clock: Robust Synergy of Two Loops. PLoS Comput. Biol. 7(12) (2011) - 2010
- [j19]Samuel Bernard, Branka Cajavec Bernard, Francis Lévi, Hanspeter Herzel:
Tumor Growth Rate Determines the Timing of Optimal Chronomodulated Treatment Schedules. PLoS Comput. Biol. 6(3) (2010) - 2009
- [j18]Pål O. Westermark, David K. Welsh, Hitoshi Okamura, Hanspeter Herzel:
Quantification of Circadian Rhythms in Single Cells. PLoS Comput. Biol. 5(11) (2009) - 2008
- [j17]Matthias E. Futschik, Hanspeter Herzel:
Are we overestimating the number of cell-cycling genes? The impact of background models on time-series analysis. Bioinform. 24(8): 1063-1069 (2008) - [j16]James C. W. Locke, Pål O. Westermark, Achim Kramer, Hanspeter Herzel:
Global parameter search reveals design principles of the mammalian circadian clock. BMC Syst. Biol. 2: 22 (2008) - 2007
- [j15]Matthias E. Futschik, Gautam Chaurasia, Hanspeter Herzel:
Comparison of human protein-protein interaction maps. Bioinform. 23(5): 605-611 (2007) - [j14]Gautam Chaurasia, Yasir Iqbal, Christian Hänig, Hanspeter Herzel, Erich E. Wanker, Matthias E. Futschik:
Flexible web-based integration of distributed large-scale human protein interaction maps. J. Integr. Bioinform. 4(1) (2007) - [j13]Matthias E. Futschik, Gautam Chaurasia, Anna Tschaut, Jenny Russ, M. Madan Babu, Hanspeter Herzel:
Functional and Transcriptional Coherency of Modules in the Human Protein Interaction Network . J. Integr. Bioinform. 4(3) (2007) - [j12]Gautam Chaurasia, Yasir Iqbal, Christian Hänig, Hanspeter Herzel, Erich E. Wanker, Matthias E. Futschik:
UniHI: an entry gate to the human protein interactome. Nucleic Acids Res. 35(Database-Issue): 590-594 (2007) - [j11]Samuel Bernard, Didier Gonze, Branka Cajavec, Hanspeter Herzel, Achim Kramer:
Synchronization-Induced Rhythmicity of Circadian Oscillators in the Suprachiasmatic Nucleus. PLoS Comput. Biol. 3(4) (2007) - 2006
- [j10]Lokesh Kumar, Matthias E. Futschik, Hanspeter Herzel:
DNA Motifs and Sequence Periodicities. Silico Biol. 6(1-2): 71-78 (2006) - [j9]Stefan Legewie, Nils Blüthgen, Hanspeter Herzel:
Mathematical Modeling Identifies Inhibitors of Apoptosis as Mediators of Positive Feedback and Bistability. PLoS Comput. Biol. 2(9) (2006) - 2005
- [j8]Szymon M. Kielbasa, Didier Gonze, Hanspeter Herzel:
Measuring similarities between transcription factor binding sites. BMC Bioinform. 6: 237 (2005) - [j7]Matthias Truss, Maciej Swat, Szymon M. Kielbasa, Reinhold Schäfer, Hanspeter Herzel, Christian Hagemeier:
HuSiDa - the human siRNA database: an open-access database for published functional siRNA sequences and technical details of efficient transfer into recipient cells. Nucleic Acids Res. 33(Database-Issue): 108-111 (2005) - [j6]Stefan Legewie, Nils Blüthgen, Reinhold Schäfer, Hanspeter Herzel:
Ultrasensitization: Switch-Like Regulation of Cellular Signaling by Transcriptional Induction. PLoS Comput. Biol. 1(5) (2005) - 2004
- [j5]Nils Blüthgen, Szymon M. Kielbasa, Branka Cajavec, Hanspeter Herzel:
HOMGL - comparing genelists across species and with different accession numbers. Bioinform. 20(1): 125-126 (2004) - [j4]Maciej Swat, Alexander E. Kel, Hanspeter Herzel:
Bifurcation analysis of the regulatory modules of the mammalian G1/S transition. Bioinform. 20(10): 1506-1511 (2004) - 2001
- [j3]Szymon M. Kielbasa, Jan O. Korbel, Dieter Beule, Johannes Schuchhardt, Hanspeter Herzel:
Combining frequency and positional information to predict transcription factor binding sites. Bioinform. 17(11): 1019-1026 (2001) - 1999
- [j2]Hanspeter Herzel, Olaf Weiss, Edward N. Trifonov:
10-11 bp periodicities in complete genomes reflect protein structure and DNA folding. Bioinform. 15(3): 187-193 (1999) - 1997
- [j1]Patrick Mergell, Hanspeter Herzel:
Modelling biphonation - The role of the vocal tract. Speech Commun. 22(2-3): 141-154 (1997)
Conference and Workshop Papers
- 2007
- [c13]Matthias E. Futschik, Hanspeter Herzel:
Are we Overestimating the Number of Cell-Cycling Genes? The Impact of Background Models. German Conference on Bioinformatics 2007: 2-14 - 2006
- [c12]Matthias E. Futschik, Gautam Chaurasia, Erich E. Wanker, Hanspeter Herzel:
Comparison of Human Protein-Protein Interaction Maps. German Conference on Bioinformatics 2006: 21-32 - 2005
- [c11]Riccardo Zaccarelli, Coen Elemans, W. Tecumseh Fitch, Hanspeter Herzel:
Two-mass models of the bird syrinx. MAVEBA 2005: 47-50 - 2004
- [c10]Szymon M. Kielbasa, Nils Blüthgen, Hanspeter Herzel:
Genome-wide Analysis of Functions Regulated by Sets of Transcription Factors. German Conference on Bioinformatics 2004: 105-113 - 2003
- [c9]Maciej Swat, Alexander E. Kel, Szymon M. Kielbasa, Hanspeter Herzel:
Modeling the G1/S transition in mammals -Bifurcation an alysis of elementary modules. German Conference on Bioinformatics 2003: 147-152 - [c8]Olaf Weiss, Andreas Ziehe, Hanspeter Herzel:
Optimizing Property Codes in Protein Data Reveals Structural Characteristics. ICANN 2003: 245-252 - 2000
- [c7]Szymon M. Kielbasa, Jan O. Korbel, Dieter Beule, Johannes Schuchhardt, Hanspeter Herzel:
Finding Transcription Factor Binding Sites in Coregulated Genes by Exhaustive Sequence Search. German Conference on Bioinformatics 2000: 55-62 - [c6]Dieter Beule, Johannes Schuchhardt, Arif Malik, Holger Eickhoff, Hans Lehrach, Hanspeter Herzel:
Reliability of Microarray Data and Clustering. German Conference on Bioinformatics 2000: 167-174 - [c5]Johannes Schuchhardt, Liying Dong, Ulrich Hoffmüller, Achim Kramer, Jens Schneider-Mergener, Hanspeter Herzel:
Peptide Binding Landscapes. German Conference on Bioinformatics 2000: 183-188 - 1999
- [c4]Dirk Holste, Dieter Beule, Wolfram Liebermeister, Johannes Schuchhardt, Hanspeter Herzel:
Mutual Information Analysis of Surrogate Gene Expression Data. German Conference on Bioinformatics 1999: 201-204 - 1998
- [c3]Hanspeter Herzel, Olaf Weiss, Edward N. Trifonov:
Sequence Periodicities in Complete Genomes Reflect Supercoiling. German Conference on Bioinformatics 1998 - [c2]Olaf Weiss, Hanspeter Herzel:
Property Codes in Sets of Protein Sequences. German Conference on Bioinformatics 1998 - 1991
- [c1]Hanspeter Herzel, J. Wendler:
Evidence of chaos in phonatory samples. EUROSPEECH 1991: 263-266
Coauthor Index
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