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Books and Theses
- 2019
[b1]André Homeyer:
Automated analysis of necrosis and steatosis in histological images : Practical solutions for coping with heterogeneity and variability (Automatisierte Analyse von Nekrose und Steatose in histologischen Bildern). Bremen University, Germany, 2019
Journal Articles
- 2023
- [j11]Daniela P. Schacherer
, Markus D. Herrmann, David A. Clunie, Henning Höfener, William Clifford, William J. R. Longabaugh, Steven D. Pieper, Ron Kikinis, Andrey Fedorov, André Homeyer:
The NCI Imaging Data Commons as a platform for reproducible research in computational pathology. Comput. Methods Programs Biomed. 242: 107839 (2023) - [j10]Christoph Jansen, Björn Lindequist, Klaus Strohmenger, Daniel Romberg, Tobias Küster, Nick Weiss, Michael Franz, Lars Ole Schwen, Theodore Evans, André Homeyer, Norman Zerbe:
The vendor-agnostic EMPAIA platform for integrating AI applications into digital pathology infrastructures. Future Gener. Comput. Syst. 140: 209-224 (2023) - 2022
- [j9]Daniel Romberg, Klaus Strohmenger, Christoph Jansen, Tobias Küster, Nick Weiss, Christian Geißler, Tomasz Soltysinski, Michael Takla, Peter Hufnagl, Norman Zerbe, André Homeyer:
EMPAIA App Interface: An open and vendor-neutral interface for AI applications in pathology. Comput. Methods Programs Biomed. 215: 106596 (2022) - 2019
- [j8]Henning Höfener, André Homeyer, Mareike Förster, Norbert Drieschner, Hans-Ulrich Schildhaus, Horst K. Hahn:
Automated density-based counting of FISH amplification signals for HER2 status assessment. Comput. Methods Programs Biomed. 173: 77-85 (2019) - 2018
- [j7]Henning Höfener, André Homeyer, Nick Weiss, Jesper Molin, Claes F. Lundström, Horst K. Hahn:
Deep learning nuclei detection: A simple approach can deliver state-of-the-art results. Comput. Medical Imaging Graph. 70: 43-52 (2018) - 2016
- [j6]Lars Ole Schwen, André Homeyer, Michael Schwier, Uta Dahmen, Olaf Dirsch, Arne Schenk, Lars Kuepfer, Tobias Preusser, Andrea Schenk:
Zonated quantification of steatosis in an entire mouse liver. Comput. Biol. Medicine 73: 108-118 (2016) - [j5]Babak Ehteshami Bejnordi, Geert Litjens, Nadya Timofeeva, Irene Otte-Höller, André Homeyer, Nico Karssemeijer, Jeroen A. W. M. van der Laak:
Stain Specific Standardization of Whole-Slide Histopathological Images. IEEE Trans. Medical Imaging 35(2): 404-415 (2016) - 2015
- [j4]André Homeyer, Andrea Schenk, Janine Arlt, Uta Dahmen, Olaf Dirsch, Horst K. Hahn:
Fast and accurate identification of fat droplets in histological images. Comput. Methods Programs Biomed. 121(2): 59-65 (2015) - 2014
- [j3]Meihong Deng, Uta Dahmen, Jian Sun, Hai Huang, Christian Sehestedt, André Homeyer, Andrea Schenk, Olaf Dirsch:
Limited Correlation Between Conventional Pathologist and Automatic Computer-Assisted Quantification of Hepatic Steatosis due to Difference Between Event-Based and Surface-Based Analysis. IEEE J. Biomed. Health Informatics 18(4): 1473-1477 (2014) - 2013
- [j2]André Homeyer, Andrea Schenk, Janine Arlt, Uta Dahmen, Olaf Dirsch, Horst K. Hahn:
Practical quantification of necrosis in histological whole-slide images. Comput. Medical Imaging Graph. 37(4): 313-322 (2013) - 2010
- [j1]Tetyana Ivanovska, Andrea Schenk, André Homeyer, Meihong Deng, Uta Dahmen, Olaf Dirsch, Horst K. Hahn, Lars Linsen:
A fast and robust hepatocyte quantification algorithm including vein processing. BMC Bioinform. 11: 124 (2010)
Conference and Workshop Papers
- 2022
- [c8]Christoph Jansen, Klaus Strohmenger, Daniel Romberg, Tobias Küster, Nick Weiss, Björn Lindequist, Michael Franz, André Homeyer, Norman Zerbe:
The EMPAIA Platform: Vendor-neutral integration of AI applications into digital pathology infrastructures. CCGRID 2022: 1017-1027 - 2018
- [c7]Nick Weiss, Henning Kost, André Homeyer:
Towards Interactive Breast Tumor Classification Using Transfer Learning. ICIAR 2018: 727-736 - 2016
- [c6]Henning Kost, André Homeyer, Peter Bult, Maschenka C. A. Balkenhol, Jeroen A. W. M. van der Laak, Horst K. Hahn:
A generic nuclei detection method for histopathological breast images. Digital Pathology 2016: 97911E - 2014
- [c5]Lei Wang, Markus Thorsten Harz, Tobias Böhler, Bram Platel, André Homeyer, Horst K. Hahn:
A robust and extendable framework towards fully automated diagnosis of nonmass lesions in breast DCE-MRI. ISBI 2014: 129-132 - [c4]Johannes Lotz, Judith Berger, Benedikt Müller, Kai Breuhahn, Niels Grabe, Stefan Heldmann, André Homeyer, Bernd Lahrmann, Hendrik Laue, Janine Olesch, Michael Schwier, Oliver Sedlaczek, Arne Warth:
Zooming in: high resolution 3D reconstruction of differently stained histological whole slide images. Digital Pathology 2014: 904104 - 2013
- [c3]Teodora Chitiboi, André Homeyer, Lars Linsen, Horst K. Hahn:
Object-Based Boundary Properties. Bildverarbeitung für die Medizin 2013: 199-204 - 2010
- [c2]Horst K. Hahn, Markus Thorsten Harz, Heike Seyffarth, Fabian Zöhrer, Tobias Böhler, Konstantinos Filippatos, Lei Wang, André Homeyer, Felix Ritter, Hendrik Laue, Matthias Günther, Thorsten Twellmann, László K. Tabár, Ulrich Bick, Kathy J. Schilling:
Concepts for Efficient and Reliable Multi-modal Breast Image Reading. Digital Mammography / IWDM 2010: 121-128 - [c1]André Homeyer, Michael Schwier, Horst K. Hahn:
A Generic Concept for Object-based Image Analysis. VISAPP (2) 2010: 530-533
Informal and Other Publications
- 2024
- [i6]Norman Zerbe, Lars Ole Schwen, Christian Geißler, Katja Wiesemann, Tom Bisson, Peter Boor, Rita Carvalho, Michael Franz, Christoph Jansen, Tim-Rasmus Kiehl, Björn Lindequist, Nora Charlotte Pohlan, Sarah Schmell, Klaus Strohmenger, Falk Zakrzewski, Markus Plass, Michael Takla, Tobias Küster, André Homeyer, Peter Hufnagl:
Joining Forces for Pathology Diagnostics with AI Assistance: The EMPAIA Initiative. CoRR abs/2401.09450 (2024) - [i5]Jan-Philipp Redlich, Friedrich Feuerhake, Joachim Weis, Nadine S. Schaadt, Sarah Teuber-Hanselmann, Christoph Buck, Sabine Luttmann, Andrea Eberle, Stefan Nikolin, Arno Appenzeller, Andreas Portmann, André Homeyer:
Machine learning-based analysis of glioma tissue sections: a review. CoRR abs/2401.15022 (2024) - 2023
- [i4]Daniela P. Schacherer, Markus D. Herrmann, David A. Clunie, Henning Höfener, William Clifford, William J. R. Longabaugh, Steve Pieper, Ron Kikinis, Andrey Fedorov, André Homeyer:
The NCI Imaging Data Commons as a platform for reproducible research in computational pathology. CoRR abs/2303.09354 (2023) - [i3]Lars Ole Schwen, Tim-Rasmus Kiehl, Rita Carvalho, Norman Zerbe, André Homeyer:
Digitization of Pathology Labs: A Review of Lessons Learned. CoRR abs/2306.03619 (2023) - 2022
- [i2]André Homeyer, Christian Geißler, Lars Ole Schwen, Falk Zakrzewski, Theodore Evans, Klaus Strohmenger, Max Westphal, Roman David Bülow, Michaela Kargl, Aray Karjauv, Isidre Munné-Bertran, Carl Orge Retzlaff, Adrià Romero-López, Tomasz Soltysinski, Markus Plass, Rita Carvalho, Peter Steinbach, Yu-Chia Lan, Nassim Bouteldja, David Haber, Mateo Rojas-Carulla, Alireza Vafaei Sadr, Matthias Kraft, Daniel Krüger, Rutger Fick, Tobias Lang, Peter Boor, Heimo Müller, Peter Hufnagl, Norman Zerbe:
Recommendations on test datasets for evaluating AI solutions in pathology. CoRR abs/2204.14226 (2022) - 2021
- [i1]Lars Ole Schwen, Daniela Schacherer, Christian Geißler, André Homeyer:
Evaluating Generic Auto-ML Tools for Computational Pathology. CoRR abs/2112.03622 (2021)
Coauthor Index
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