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Niels Grabe
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2020 – today
- 2024
- [e4]Rainer Röhrig, Niels Grabe, Ursula Hertha Hübner, Klaus Jung, Ulrich Sax, Schmidt Carsten Oliver, Martin Sedlmayr, Antonia Zapf:
German Medical Data Sciences 2024 - Health - Thinking, Researching and Acting Together. Proceedings of the 69th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology e.V. (gmds) 2024 in Dresden, Germany. Studies in Health Technology and Informatics 317, IOS Press 2024, ISBN 978-1-64368-536-6 [contents] - 2023
- [e3]Rainer Röhrig, Niels Grabe, Martin Haag, Ursula Hübner, Ulrich Sax, Carsten Oliver Schmidt, Martin Sedlmayr, Antonia Zapf:
German Medical Data Sciences 2023 - Science. Close to People. - Proceedings of the 68th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology e.V. (gmds) 2023 in Heilbronn, Germany. Studies in Health Technology and Informatics 307, IOS Press 2023, ISBN 978-1-64368-428-4 [contents] - [i2]Huy Q. Vo, Pietro Antonio Cicalese, Surya Seshan, Syed Asad Rizvi, Aneesh Vathul, Gloria Bueno, Aníbal Pedraza Dorado, Niels Grabe, Katharina Stolle, Francesco Pesce, Joris J. T. H. Roelofs, Jesper Kers, Vitoantonio Bevilacqua, Nicola Altini, Bernd Schröppel, Dario Roccatello, Antonella Barreca, Savino Sciascia, Chandra Mohan, Hien Van Nguyen, Jan U. Becker:
Segmentation of diagnostic tissue compartments on whole slide images with renal thrombotic microangiopathies (TMAs). CoRR abs/2311.14971 (2023) - 2022
- [e2]Rainer Röhrig, Niels Grabe, Verena S. Hoffmann, Ursula Hübner, Jochem König, Ulrich Sax, Björn Schreiweis, Martin Sedlmayr:
German Medical Data Sciences 2022 - Future Medicine: More Precise, More Integrative, More Sustainable! - Proceedings of the Joint Conference of the 67th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology e.V. (gmds) and the 14th Annual Meeting of the TMF - Technology, Methods, and Infrastructure for Networked Medical Research e.V. 2022 online in Kiel, Germany. Studies in Health Technology and Informatics 296, IOS Press 2022, ISBN 978-1-64368-302-7 [contents]
2010 – 2019
- 2018
- [j12]Yi Yin, Oliver Sedlaczek, Benedikt Müller, Arne Warth, Margarita Gonzalez-Vallinas, Bernd Lahrmann, Niels Grabe, Hans-Ulrich Kauczor, Kai Breuhahn, Irene E. Vignon-Clementel, Dirk Drasdo:
Tumor Cell Load and Heterogeneity Estimation From Diffusion-Weighted MRI Calibrated With Histological Data: an Example From Lung Cancer. IEEE Trans. Medical Imaging 37(1): 35-46 (2018) - [e1]Ursula Hübner, Ulrich Sax, Hans-Ulrich Prokosch, Bernhard Breil, Harald Binder, Antonia Zapf, Brigitte Strahwald, Tim Beißbarth, Niels Grabe, Anke Schöler:
German Medical Data Sciences: A Learning Healthcare System - Proceedings of the 63rd Annual Meeting of the German Association of Medical Informatics, Biometry and Epidemiology (GMDS e.V.) 2018 in Osnabrück, Germany, 2-6 September 2018, GMDS 2018. Studies in Health Technology and Informatics 253, IOS Press 2018, ISBN 978-1-61499-895-2 [contents] - 2016
- [j11]Johannes Lotz, Janine Olesch, Benedikt Müller, Thomas Polzin, P. Galuschka, J. M. Lotz, Stefan Heldmann, Hendrik Laue, Margarita Gonzalez-Vallinas, Arne Warth, Bernd Lahrmann, Niels Grabe, Oliver Sedlaczek, Kai Breuhahn, Jan Modersitzki:
Patch-Based Nonlinear Image Registration for Gigapixel Whole Slide Images. IEEE Trans. Biomed. Eng. 63(9): 1812-1819 (2016) - [c10]Geert Litjens, Kai Safferling, Niels Grabe:
Automated robust registration of grossly misregistered whole-slide images with varying stains. Digital Pathology 2016: 979103 - 2015
- [j10]Aristotelis Kittas, Amélie Barozet, Jekaterina Sereshti, Niels Grabe, Sophia Tsoka:
CytoASP: a Cytoscape app for qualitative consistency reasoning, prediction and repair in biological networks. BMC Syst. Biol. 9: 34 (2015) - 2014
- [c9]Johannes Lotz, Judith Berger, Benedikt Müller, Kai Breuhahn, Niels Grabe, Stefan Heldmann, André Homeyer, Bernd Lahrmann, Hendrik Laue, Janine Olesch, Michael Schwier, Oliver Sedlaczek, Arne Warth:
Zooming in: high resolution 3D reconstruction of differently stained histological whole slide images. Digital Pathology 2014: 904104 - 2013
- [j9]Thomas Sütterlin, Christoph Kolb, Hartmut Dickhaus, Dirk Jäger, Niels Grabe:
Bridging the scales: semantic integration of quantitative SBML in graphical multi-cellular models and simulations with EPISIM and COPASI. Bioinform. 29(2): 223-229 (2013) - 2012
- [c8]Santiago Videla, Carito Guziolowski, Federica Eduati, Sven Thiele, Niels Grabe, Julio Saez-Rodriguez, Anne Siegel:
Revisiting the Training of Logic Models of Protein Signaling Networks with ASP. CMSB 2012: 342-361 - [i1]Santiago Videla, Carito Guziolowski, Federica Eduati, Sven Thiele, Niels Grabe, Julio Saez-Rodriguez, Anne Siegel:
Revisiting the Training of Logic Models of Protein Signaling Networks with a Formal Approach based on Answer Set Programming. CoRR abs/1210.0690 (2012) - 2010
- [j8]Thora Pommerencke, Kathi Westphal, Claudia Ernst, Kai Safferling, Hartmut Dickhaus, Thorsten Steinberg, Pascal Tomakidi, Niels Grabe:
Spatial quantification and classification of skin response following perturbation using organotypic skin cultures. Bioinform. 26(21): 2760-2766 (2010) - [c7]Thora Pommerencke, Kathi Westphal, Claudia Ernst, Hartmut Dickhaus, Niels Grabe:
Image-based Quantification of Skin Irritation by Spatial Biomarker Profiling. Bildverarbeitung für die Medizin 2010: 415-419
2000 – 2009
- 2009
- [j7]Thomas Sütterlin, Simone Huber, Hartmut Dickhaus, Niels Grabe:
Modeling multi-cellular behavior in epidermal tissue homeostasis via finite state machines in multi-agent systems. Bioinform. 25(16): 2057-2063 (2009) - [c6]Thora Pommerencke, Hartmut Dickhaus, Niels Grabe:
Vollautomatische Einzelzellerkennung auf fluoreszenten Gewebeschnitten humaner Epidermis. Bildverarbeitung für die Medizin 2009: 311-315 - 2008
- [j6]Thora Pommerencke, Thorsten Steinberg, Hartmut Dickhaus, Pascal Tomakidi, Niels Grabe:
Nuclear staining and relative distance for quantifying epidermal differentiation in biomarker expression profiling. BMC Bioinform. 9 (2008) - 2007
- [j5]Niels Grabe, Karsten Neuber:
Simulating psoriasis by altering transit amplifying cells. Bioinform. 23(11): 1309-1312 (2007) - [j4]Niels Grabe, Thora Pommerencke, Thorsten Steinberg, Hartmut Dickhaus, Pascal Tomakidi:
Reconstructing protein networks of epithelial differentiation from histological sections. Bioinform. 23(23): 3200-3208 (2007) - [c5]Thora Pommerencke, Pascal Tomakidi, Hartmut Dickhaus, Niels Grabe:
Ermittlung von räumlichen Proteinexpressionsmustern mittels Bildverarbeitung. Bildverarbeitung für die Medizin 2007: 1-5 - 2006
- [c4]Niels Grabe, Thora Pommerencke, Dennis Müller, Simone Huber, Karsten Neuber, Hartmut Dickhaus:
Modelling Epidermal Homeostasis as an Approach for Clinical Bioinformatics. MIE 2006: 105-110 - 2005
- [j3]Niels Grabe, Karsten Neuber:
A multicellular systems biology model predicts epidermal morphology, kinetics and Ca2+ flow. Bioinform. 21(17): 3541-3547 (2005) - 2004
- [j2]Matthias Koenig, Niels Grabe:
Highly specific prediction of phosphorylation sites in proteins. Bioinform. 20(18): 3620-3627 (2004) - 2000
- [j1]Niels Grabe:
AliBaba2: Context specific identification of transcription factor binding sites. Silico Biol. 1: S1-S15 (2000)
1990 – 1999
- 1999
- [c3]Niels Grabe, Ralf Hofestädt:
Predicting transcription factor binding sites by constructing context specific matrices. German Conference on Bioinformatics 1999: 25-36 - [c2]Niels Grabe:
Molekulare Bioinformatik - Informationsfusion zur Genregulation. GI Jahrestagung 1999: 173-180 - 1998
- [c1]Niels Grabe, Ralf Hofestädt:
A promoter model based on different combinations of binding sites. German Conference on Bioinformatics 1998
Coauthor Index
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