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2020 – today
- 2024
[j3]Parantapa Bhattacharya, Dustin Machi, Jiangzhuo Chen, Stefan Hoops, Bryan Lewis, Henning S. Mortveit, Srinivasan Venkatramanan, Mandy L. Wilson, Achla Marathe, Przemyslaw J. Porebski, Brian Klahn, Joseph Outten, Anil Vullikanti, Dawen Xie, Abhijin Adiga, Shawn Brown, Christopher L. Barrett, Madhav V. Marathe:
Novel multi-cluster workflow system to support real-time HPC-enabled epidemic science: Investigating the impact of vaccine acceptance on COVID-19 spread. J. Parallel Distributed Comput. 191: 104899 (2024)- [i1]Abhijin Adiga, Ayush Chopra, Mandy L. Wilson, S. S. Ravi, Dawen Xie, Samarth Swarup, Bryan Lewis, Ramesh Raskar, Madhav V. Marathe:
A High-Resolution, US-scale Digital Similar of Interacting Livestock, Wild Birds, and Human Ecosystems with Applications to Multi-host Epidemic Spread. CoRR abs/2411.01386 (2024) - 2023
- [j2]Parantapa Bhattacharya
, Jiangzhuo Chen, Stefan Hoops, Dustin Machi, Bryan L. Lewis, Srinivasan Venkatramanan, Mandy L. Wilson, Brian Klahn, Aniruddha Adiga, Benjamin Hurt, Joseph Outten, Abhijin Adiga, Andrew S. Warren, Young Yun Baek, Przemyslaw J. Porebski, Achla Marathe, Dawen Xie, Samarth Swarup, Anil Vullikanti, Henning S. Mortveit, Stephen G. Eubank, Christopher L. Barrett, Madhav Vinayak Marathe:
Data-driven scalable pipeline using national agent-based models for real-time pandemic response and decision support. Int. J. High Perform. Comput. Appl. 37(1): 4-27 (2023) - [c9]Galen Harrison, Przemyslaw J. Porebski, Jiangzhuo Chen, Mandy L. Wilson, Henning S. Mortveit, Parantapa Bhattacharya, Dawen Xie, Stefan Hoops, Anil Vullikanti, Li Xiong, James Joshi, Madhav V. Marathe:
Synthetic Information and Digital Twins for Pandemic Science: Challenges and Opportunities. TPS-ISA 2023: 23-33 - 2021
- [c8]Parantapa Bhattacharya, Dustin Machi, Jiangzhuo Chen, Stefan Hoops, Bryan L. Lewis, Henning S. Mortveit, Srinivasan Venkatramanan, Mandy L. Wilson, Achla Marathe, Przemyslaw J. Porebski, Brian Klahn, Joseph Outten, Anil Vullikanti, Dawen Xie, Abhijin Adiga, Shawn Brown, Christopher L. Barrett, Madhav V. Marathe:
AI-Driven Agent-Based Models to Study the Role of Vaccine Acceptance in Controlling COVID-19 Spread in the US. IEEE BigData 2021: 1566-1574 - [c7]Stefan Hoops, Jiangzhuo Chen, Abhijin Adiga, Bryan L. Lewis, Henning S. Mortveit, Hannah Baek, Mandy L. Wilson, Dawen Xie, Samarth Swarup, Srinivasan Venkatramanan, Justin Crow, Elena Diskin, Seth Levine, Helen Tazelaar, Brooke Rossheim, Chris Ghaemmaghami, Rebecca Early, Chris Barrett, Madhav V. Marathe, Carter Price:
High Performance Agent-Based Modeling to Study Realistic Contact Tracing Protocols. WSC 2021: 1-12 - 2020
- [j1]James J. Davis, Alice R. Wattam, Ramy K. Aziz, Thomas S. Brettin, Ralph Butler, Rory Butler, Philippe Chlenski, Neal Conrad, Allan Dickerman, Emily M. Dietrich, Joseph L. Gabbard, Svetlana Gerdes, Andrew Guard, Ronald W. Kenyon, Dustin Machi, Chunhong Mao, Daniel E. Murphy-Olson, Marcus Nguyen, Eric K. Nordberg, Gary J. Olsen, Robert Olson, Jamie C. Overbeek, Ross A. Overbeek, Bruce D. Parrello, Gordon D. Pusch, Maulik Shukla, Chris Thomas, Margo VanOeffelen, Veronika Vonstein, Andrew S. Warren, Fangfang Xia, Dawen Xie, Hyun Seung Yoo, Rick Stevens:
The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities. Nucleic Acids Res. 48(Database-Issue): D606-D612 (2020) - [c6]Akhil Sai Peddireddy, Dawen Xie, Pramod Patil, Mandy L. Wilson, Dustin Machi, Srinivasan Venkatramanan, Brian Klahn, Przemyslaw J. Porebski, Parantapa Bhattacharya, Shirish Dumbre, Erin Raymond, Madhav V. Marathe:
From 5Vs to 6Cs: Operationalizing Epidemic Data Management with COVID-19 Surveillance. IEEE BigData 2020: 1380-1387
2010 – 2019
- 2013
- [c5]Christopher L. Barrett, Keith R. Bisset, Shridhar Chandan, Jiangzhuo Chen, Youngyun Chungbaek, Stephen G. Eubank, C. Yaman Evrenosoglu, Bryan L. Lewis, Kristian Lum, Achla Marathe, Madhav V. Marathe, Henning S. Mortveit, Nidhi Parikh, Arun G. Phadke, Jeffrey H. Reed, Caitlin M. Rivers, Sudip Saha, Paula Elaine Stretz, Samarth Swarup, James S. Thorp, Anil Vullikanti, Dawen Xie:
Planning and response in the aftermath of a large crisis: An agent-based informatics framework. WSC 2013: 1515-1526 - 2012
- [c4]Keith R. Bisset, Md. Maksudul Alam, Josep Bassaganya-Riera, Adria Carbo, Stephen G. Eubank, Raquel Hontecillas, Stefan Hoops, Yongguo Mei, Katherine V. Wendelsdorf, Dawen Xie, Jae-Seung Yeom, Madhav V. Marathe:
High-Performance Interaction-Based Simulation of Gut Immunopathologies with ENteric Immunity Simulator (ENISI). IPDPS 2012: 48-59
2000 – 2009
- 2006
- [c3]Dawen Xie, Marco Morales, Roger A. Pearce, Shawna L. Thomas, Jyh-Ming Lien, Nancy M. Amato:
Incremental Map Generation (IMG). WAFR 2006: 53-68 - 2005
- [c2]O. Burçhan Bayazit, Dawen Xie, Nancy M. Amato:
Iterative relaxation of constraints: a framework for improving automated motion planning. IROS 2005: 3433-3440 - 2004
- [c1]Dawen Xie, Nancy M. Amato:
A Kinematics-based Probabilistic Roadmap Method for High DOF Closed Chain Systems. ICRA 2004: 473-478
Coauthor Index
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