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ORCIDTyler W. H. Backman
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Journal Articles
- 2023
[j10]Xavier B. Tao
, Sarah Lafrance, Yifei Xing, Alberto A Nava, Héctor García Martín, Jay D. Keasling, Tyler W. H. Backman:
ClusterCAD 2.0: an updated computational platform for chimeric type I polyketide synthase and nonribosomal peptide synthetase design. Nucleic Acids Res. 51(D1): 532-538 (2023)- [j9]Tyler W. H. Backman, Christina Schenk, Tijana Radivojevic, David Ando, Jahnavi Singh, Jeffrey J. Czajka, Zak Costello, Jay D. Keasling, Yinjie Tang, Elena V. Akhmatskaya, Héctor García Martín:
BayFlux: A Bayesian method to quantify metabolic Fluxes and their uncertainty at the genome scale. PLoS Comput. Biol. 19(11) (2023) - 2018
- [j8]Clara H. Eng, Tyler W. H. Backman, Constance B. Bailey, Christophe N. Magnan, Héctor García Martín, Leonard Katz, Pierre Baldi, Jay D. Keasling:
ClusterCAD: a computational platform for type I modular polyketide synthase design. Nucleic Acids Res. 46(Database-Issue): D509-D515 (2018) - 2017
- [j7]Garrett W. Birkel, Amit Ghosh, Vinay Satish Kumar, Daniel Weaver, David Ando, Tyler W. H. Backman, Adam P. Arkin, Jay D. Keasling, Héctor García Martín:
The JBEI quantitative metabolic modeling library (jQMM): a python library for modeling microbial metabolism. BMC Bioinform. 18(1): 205:1-205:11 (2017) - [j6]Garrett W. Birkel, Amit Ghosh, Vinay Satish Kumar, Daniel Weaver, David Ando, Tyler W. H. Backman, Adam P. Arkin, Jay D. Keasling, Héctor García Martín:
Erratum to: The JBEI quantitative metabolic modeling library (jQMM): a python library for modeling microbial metabolism. BMC Bioinform. 18(1): 219:1-219:2 (2017) - 2016
- [j5]Tyler W. H. Backman, Thomas Girke:
systemPipeR: NGS workflow and report generation environment. BMC Bioinform. 17: 388 (2016) - [j4]Tyler W. H. Backman, Thomas Girke:
bioassayR: Cross-Target Analysis of Small Molecule Bioactivity. J. Chem. Inf. Model. 56(7): 1237-1242 (2016) - 2013
- [j3]Yan Wang, Tyler W. H. Backman, Kevin Horan, Thomas Girke:
fmcsR: mismatch tolerant maximum common substructure searching in R. Bioinform. 29(21): 2792-2794 (2013) - 2011
- [j2]Tyler W. H. Backman, Yiqun Cao, Thomas Girke:
ChemMine tools: an online service for analyzing and clustering small molecules. Nucleic Acids Res. 39(Web-Server-Issue): 486-491 (2011) - 2008
- [j1]Tyler W. H. Backman, Christopher M. Sullivan, Jason S. Cumbie, Zachary A. Miller, Elisabeth J. Chapman, Noah Fahlgren, Scott A. Givan, James C. Carrington, Kristin D. Kasschau:
Update of ASRP: the Arabidopsis Small RNA Project database. Nucleic Acids Res. 36(Database-Issue): 982-985 (2008)
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