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2020 – today
- 2023
[j10]Zhengyue Zhang
, Jirí Sponer, Giovanni Bussi, Vojtech Mlýnský, Petr Sulc, Chad R. Simmons, Nicholas Stephanopoulos, Miroslav Krepl:
Atomistic Picture of Opening-Closing Dynamics of DNA Holliday Junction Obtained by Molecular Simulations. J. Chem. Inf. Model. 63(9): 2794-2809 (2023)- 2022
- [j9]Isabell Louise Grothaus, Giovanni Bussi, Lucio Colombi Ciacchi:
Exploration, Representation, and Rationalization of the Conformational Phase Space of N-Glycans. J. Chem. Inf. Model. 62(20): 4992-5008 (2022)
2010 – 2019
- 2018
- [j8]Andrea Cesari, Sabine Reißer, Giovanni Bussi:
Using the Maximum Entropy Principle to Combine Simulations and Solution Experiments. Comput. 6(1): 15 (2018) - 2015
- [j7]Francesco Di Palma, Sandro Bottaro, Giovanni Bussi:
Kissing loop interaction in adenine riboswitch: insights from umbrella sampling simulations. BMC Bioinform. 16(S-9): S6 (2015) - 2014
- [j6]Gareth A. Tribello, Massimiliano Bonomi, Davide Branduardi, Carlo Camilloni, Giovanni Bussi:
PLUMED 2: New feathers for an old bird. Comput. Phys. Commun. 185(2): 604-613 (2014) - [j5]Cameron Abrams, Giovanni Bussi:
Enhanced Sampling in Molecular Dynamics Using Metadynamics, Replica-Exchange, and Temperature-Acceleration. Entropy 16(1): 163-199 (2014) - 2013
- [j4]Duvan Franco, Jacopo Sgrignani, Giovanni Bussi, Alessandra Magistrato:
Structural Role of Uracil DNA Glycosylase for the Recognition of Uracil in DNA Duplexes. Clues from Atomistic Simulations. J. Chem. Inf. Model. 53(6): 1371-1387 (2013)
2000 – 2009
- 2009
- [j3]Layla Martin-Samos, Giovanni Bussi:
SaX: An open source package for electronic-structure and optical-properties calculations in the GW approximation. Comput. Phys. Commun. 180(8): 1416-1425 (2009) - [j2]Massimiliano Bonomi, Davide Branduardi, Giovanni Bussi, Carlo Camilloni, Davide Provasi, Paolo Raiteri, Davide Donadio, Fabrizio Marinelli, Fabio Pietrucci, Ricardo A. Broglia, Michele Parrinello:
PLUMED: A portable plugin for free-energy calculations with molecular dynamics. Comput. Phys. Commun. 180(10): 1961-1972 (2009) - 2008
- [j1]Giovanni Bussi, Michele Parrinello:
Stochastic thermostats: comparison of local and global schemes. Comput. Phys. Commun. 179(1-3): 26-29 (2008) - [i1]Giovanni Bussi:
A simple asynchronous replica-exchange implementation. CoRR abs/0812.1633 (2008)
Coauthor Index
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