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ORCIDJohn M. Dennis
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2020 – today
- 2024
[j17]Pedro Cardoso, John M. Dennis
, Jack Bowden, Beverley M. Shields, Trevelyan J. McKinley:
Dirichlet process mixture models to impute missing predictor data in counterfactual prediction models: an application to predict optimal type 2 diabetes therapy. BMC Medical Informatics Decis. Mak. 24(1): 12 (2024)- [c27]John M. Dennis, Jian Sun, Sheri Voelz, George Bryan, David Richter:
A Portable and Efficient Lagrangian Particle Capability for Idealized Atmospheric Phenomena. PASC 2024: 26:1-26:11 - 2023
- [j16]John M. Dennis, Allison H. Baker, Brian Dobbins, Michael M. Bell, Jian Sun, Youngsung Kim, Ting-Yu Cha:
Enabling efficient execution of a variational data assimilation application. Int. J. High Perform. Comput. Appl. 37(2): 101-114 (2023) - [j15]Ashwini Venkatasubramaniam, Bilal A. Mateen, Beverley M. Shields, Andrew T. Hattersley, Angus G. Jones, Sebastian J. Vollmer, John M. Dennis:
Comparison of causal forest and regression-based approaches to evaluate treatment effect heterogeneity: an application for type 2 diabetes precision medicine. BMC Medical Informatics Decis. Mak. 23(1): 110 (2023)
2010 – 2019
- 2019
- [j14]John M. Dennis, Brian Dobbins, Christopher Kerr, Youngsung Kim:
Optimizing the HOMME dynamical core for multicore platforms. Int. J. High Perform. Comput. Appl. 33(5) (2019) - [c26]Daniel J. Milroy, Allison H. Baker, John M. Dennis, Andrew Gettelman:
Investigating the Impact of Mixed Precision on Correctness for a Large Climate Code. CORRECTNESS@SC 2019: 44-51 - 2017
- [j13]Patrick MacArthur, Qian Liu, Robert D. Russell, Fabrice Mizero, Malathi Veeraraghavan, John M. Dennis:
An Integrated Tutorial on InfiniBand, Verbs, and MPI. IEEE Commun. Surv. Tutorials 19(4): 2894-2926 (2017) - [c25]Youngsung Kim, John M. Dennis, Christopher Kerr:
Assessing Representativeness of Kernels Using Descriptive Statistics. CLUSTER 2017: 818-825 - [c24]Fatma Alali, Fabrice Mizero, Malathi Veeraraghavan, John M. Dennis:
A measurement study of congestion in an InfiniBand network. TMA 2017: 1-9 - 2016
- [j12]Fabrice Mizero, Malathi Veeraraghavan, Qian Liu, Robert D. Russell, John M. Dennis:
A Dynamic Congestion Management System for InfiniBand Networks. Supercomput. Front. Innov. 3(2): 5-20 (2016) - [c23]Kevin Paul, Sheri A. Mickelson, John M. Dennis:
A new parallel python tool for the standardization of earth system model data. IEEE BigData 2016: 2953-2959 - [c22]Youngsung Kim, John M. Dennis, Christopher Kerr, Raghu Raj Prasanna Kumar, Amogh Simha, Allison H. Baker, Sheri A. Mickelson:
KGEN: A Python Tool for Automated Fortran Kernel Generation and Verification. ICCS 2016: 1450-1460 - [c21]Daniel Milroy, Allison H. Baker, Dorit Hammerling, John M. Dennis, Sheri A. Mickelson, Elizabeth R. Jessup:
Towards Characterizing the Variability of Statistically Consistent Community Earth System Model Simulations. ICCS 2016: 1589-1600 - [c20]Benjamin F. Jamroz, John M. Dennis:
Minimal Aggregated Shared Memory Messaging on Distributed Memory Supercomputers. IPDPS 2016: 669-678 - [c19]Taylor Barnes, Brandon Cook, Jack Deslippe, Douglas Doerfler, Brian Friesen, Yun (Helen) He, Thorsten Kurth, Tuomas Koskela, Mathieu Lobet, Tareq M. Malas, Leonid Oliker, Andrey Ovsyannikov, Abhinav Sarje, Jean-Luc Vay, Henri Vincenti, Samuel Williams, Pierre Carrier, Nathan Wichmann, Marcus Wagner, Paul R. C. Kent, Christopher Kerr, John M. Dennis:
Evaluating and Optimizing the NERSC Workload on Knights Landing. PMBS@SC 2016: 43-53 - 2015
- [c18]Kevin Paul, Sheri A. Mickelson, John M. Dennis, Haiying Xu, David Brown:
Light-weight parallel Python tools for earth system modeling workflows. IEEE BigData 2015: 1985-1994 - [c17]Aparna Sasidharan, John M. Dennis, Marc Snir:
A General Space-filling Curve Algorithm for Partitioning 2D Meshes. HPCC/CSS/ICESS 2015: 875-879 - [c16]Youngsung Kim, Pavol Cerný, John M. Dennis:
Performance search engine driven by prior knowledge of optimization. ARRAY@PLDI 2015: 25-30 - [c15]Yong Hu, Xiaomeng Huang, Allison H. Baker, Yu-heng Tseng, Frank O. Bryan, John M. Dennis, Guangwen Yang:
Improving the scalability of the ocean barotropic solver in the community earth system model. SC 2015: 42:1-42:12 - [i1]Qian Liu, Robert D. Russell, Fabrice Mizero, Malathi Veeraraghavan, John M. Dennis, Benjamin F. Jamroz:
Implementation of PFC and RCM for RoCEv2 Simulation in OMNeT++. CoRR abs/1509.03559 (2015) - 2014
- [c14]Allison H. Baker, Haiying Xu, John M. Dennis, Michael N. Levy, Doug Nychka, Sheri A. Mickelson, Jim Edwards, Mariana Vertenstein, Al Wegener:
A methodology for evaluating the impact of data compression on climate simulation data. HPDC 2014: 203-214 - 2013
- [j11]En-Jui Lee, He Huang, John M. Dennis, Po Chen, Liqiang Wang:
An optimized parallel LSQR algorithm for seismic tomography. Comput. Geosci. 61: 184-197 (2013) - [c13]He Huang, John M. Dennis, Liqiang Wang, Po Chen:
A Scalable Parallel LSQR Algorithm for Solving Large-Scale Linear System for Tomographic Problems: A Case Study in Seismic Tomography. ICCS 2013: 581-590 - 2012
- [j10]John M. Dennis, Mariana Vertenstein, Patrick H. Worley, Arthur A. Mirin, Anthony P. Craig, Robert L. Jacob, Sheri A. Mickelson:
Computational performance of ultra-high-resolution capability in the Community Earth System Model. Int. J. High Perform. Comput. Appl. 26(1): 5-16 (2012) - [j9]John M. Dennis, Jim Edwards, Raymond M. Loy, Robert L. Jacob, Arthur A. Mirin, Anthony P. Craig, Mariana Vertenstein:
An application-level parallel I/O library for Earth system models. Int. J. High Perform. Comput. Appl. 26(1): 43-53 (2012) - [j8]John M. Dennis, Jim Edwards, Katherine J. Evans, Oksana Guba, Peter H. Lauritzen, Arthur A. Mirin, Amik St.-Cyr, Mark A. Taylor, Patrick H. Worley:
CAM-SE: A scalable spectral element dynamical core for the Community Atmosphere Model. Int. J. High Perform. Comput. Appl. 26(1): 74-89 (2012) - [c12]Andrew Stone, John M. Dennis, Michelle Strout:
Establishing a Miniapp as a programmability proxy. PPoPP 2012: 333-334 - [c11]Zhengyang Liu, Malathi Veeraraghavan, Zhenzhen Yan, Chris Tracy, Jing Tie, Ian T. Foster, John M. Dennis, Jason Hick, Yee-Ting Li, W. Yang:
On using virtual circuits for GridFTP transfers. SC 2012: 81 - 2011
- [c10]Matthew Woitaszek, John M. Dennis, Taleena R. Sines:
Parallel high-resolution climate data analysis using swift. MTAGS@SC 2011: 5-14 - [c9]Patrick H. Worley, Arthur A. Mirin, Anthony P. Craig, Mark A. Taylor, John M. Dennis, Mariana Vertenstein:
Performance of the community earth system model. SC 2011: 54:1-54:11
2000 – 2009
- 2009
- [c8]John M. Dennis, Elizabeth R. Jessup, William M. Waite:
SLAMM - Automating Memory Analysis for Numerical Algorithms. LDTA 2009: 89-104 - 2008
- [j7]John M. Dennis, Henry M. Tufo:
Scaling climate simulation applications on the IBM Blue Gene/L system. IBM J. Res. Dev. 52(1-2): 117-126 (2008) - 2007
- [j6]John M. Dennis, Elizabeth R. Jessup:
Applying Automated Memory Analysis to Improve Iterative Algorithms. SIAM J. Sci. Comput. 29(5): 2210-2223 (2007) - [c7]John M. Dennis:
Inverse Space-Filling Curve Partitioning of a Global Ocean Model. IPDPS 2007: 1-10 - 2006
- [j5]Allison H. Baker, John M. Dennis, Elizabeth R. Jessup:
On Improving Linear Solver Performance: A Block Variant of GMRES. SIAM J. Sci. Comput. 27(5): 1608-1626 (2006) - 2005
- [j4]John M. Dennis, Aimé Fournier, William F. Spotz, Amik St.-Cyr, Mark A. Taylor, Stephen J. Thomas, Henry M. Tufo:
High-Resolution Mesh Convergence Properties and Parallel Efficiency of a Spectral Element Atmospheric Dynamical Core. Int. J. High Perform. Comput. Appl. 19(3): 225-235 (2005) - [c6]John M. Dennis, Michael N. Levy, Ramachandran D. Nair, Henry M. Tufo, Theron Voran:
Towards an Efficient and Scalable Discontinuous Galerkin Atmospheric Model. IPDPS 2005 - 2003
- [j3]Stephen J. Thomas, John M. Dennis, Henry M. Tufo, Paul F. Fischer:
A Schwarz Preconditioner for the Cubed-Sphere. SIAM J. Sci. Comput. 25(2): 442-453 (2003) - [c5]John M. Dennis:
Partitioning with Space-Filling Curves on the Cubed-Sphere. IPDPS 2003: 269 - 2002
- [j2]Stephen J. Thomas, Richard D. Loft, John M. Dennis:
Parallel implementation issues: global versus local methods. Comput. Sci. Eng. 4(5): 26-31 (2002) - [c4]Allison H. Baker, John M. Dennis, Elizabeth R. Jessup:
Toward Memory-Efficient Linear Solvers. VECPAR 2002: 315-327 - 2001
- [c3]Richard D. Loft, Stephen J. Thomas, John M. Dennis:
Terascale spectral element dynamical core for atmospheric general circulation models. SC 2001: 18
1990 – 1999
- 1999
- [c2]John P. Clyne, John M. Dennis:
Interactive Direct Volume Rendering of Time-Varying Data. VisSym 1999: 109-120 - 1996
- [p1]Robert E. Bixby, John M. Dennis, Zhijun Wu:
Solving Nonlinear Integer Programs with a Subgradient Approach on Parallel Computers. Applications on Advanced Architecture Computers 1996: 277-286 - 1995
- [j1]Steven W. Hammond, Richard D. Loft, John M. Dennis, Richard K. Sato:
Implementation and Performance Issues of a Massively Parallel Atmospheric Model. Parallel Comput. 21(10): 1593-1619 (1995) - [c1]Steven W. Hammond, Richard D. Loft, John M. Dennis, Richard K. Sato:
A Data Parallel Implementation of the NCAR Community Climate Model (CCM2). PP 1995: 125-130
Coauthor Index
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