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Journal Articles
- 2021
[j7]Yang Yang, Timothy M. Walker
, Samaneh Kouchaki, Chenyang Wang, Timothy E. A Peto, Derrick W. Crook, David A. Clifton:
An end-to-end heterogeneous graph attention network for Mycobacterium tuberculosis drug-resistance prediction. Briefings Bioinform. 22(6) (2021)- 2019
- [j6]Samaneh Kouchaki, Yang Yang, Timothy M. Walker, A. Sarah Walker, Daniel J. Wilson, Timothy E. A Peto, Derrick W. Crook, CRyPTIC Consortium, David A. Clifton:
Application of machine learning techniques to tuberculosis drug resistance analysis. Bioinform. 35(13): 2276-2282 (2019) - [j5]Yang Yang, Timothy M. Walker, A. Sarah Walker, Daniel J. Wilson, Timothy E. A Peto, Derrick W. Crook, Farah Shamout, CRyPTIC Consortium, Tingting Zhu, David A. Clifton:
DeepAMR for predicting co-occurrent resistance of Mycobacterium tuberculosis. Bioinform. 35(18): 3240-3249 (2019) - 2018
- [j4]Yang Yang, Katherine E. Niehaus, Timothy M. Walker, Zamin Iqbal, A. Sarah Walker, Daniel J. Wilson, Tim E. A. Peto, Derrick W. Crook, E. Grace Smith, Tingting Zhu, David A. Clifton:
Machine learning for classifying tuberculosis drug-resistance from DNA sequencing data. Bioinform. 34(10): 1666-1671 (2018) - 2017
- [j3]Oriol Mazariegos-Canellas, Trien Do, Tim E. A. Peto, David W. Eyre, Anthony Underwood, Derrick W. Crook, David H. Wyllie:
BugMat and FindNeighbour: command line and server applications for investigating bacterial relatedness. BMC Bioinform. 18(1): 477 (2017) - 2013
- [j2]David W. Eyre, Madeleine L. Cule, David Griffiths, Derrick W. Crook, Tim E. A. Peto, A. Sarah Walker, Daniel J. Wilson:
Detection of Mixed Infection from Bacterial Whole Genome Sequence Data Allows Assessment of Its Role in Clostridium difficile Transmission. PLoS Comput. Biol. 9(5) (2013) - 2011
- [j1]John Michael Finney, A. Sarah Walker, Tim E. A. Peto, David H. Wyllie:
An efficient record linkage scheme using graphical analysis for identifier error detection. BMC Medical Informatics Decis. Mak. 11: 7 (2011)
Conference and Workshop Papers
- 2020
- [c4]Fan Yang-Turner, Denis Volk, Tim E. A. Peto, Tony Roberts, Juan Herreros, Richard Ellis:
ViewBovine: A Microservices-Powered Web Application to Support Interactive Investigation of Bovine Tuberculosis Infection Pathways. SERVICES 2020: 4-6 - 2019
- [c3]Fan Yang-Turner, Denis Volk, Philip Fowler, Jeremy Swann, Matthew Bull, Sarah Hoosdally, Thomas Connor, Tim E. A. Peto, Derrick W. Crook:
Scalable Pathogen Pipeline Platform (SP3): Enabling Unified Genomic Data Analysis with Elastic Cloud Computing. CLOUD 2019: 478-480 - 2018
- [c2]Fan Yang-Turner, Lawrence Gripper, Jeremy Swann, Trien Do, Dona Foster, Denis Volk, Anita Ramanan, Marcus Robinson, Tim E. A. Peto, Derrick W. Crook:
An Open-Source Azure Solution for Scalable Genomics Workflows. SERVICES 2018: 39-40 - 2014
- [c1]Katherine E. Niehaus, Timothy M. Walker, Derrick W. Crook, Tim E. A. Peto, David A. Clifton:
Machine learning for the prediction of antibacterial susceptibility in Mycobacterium tuberculosis. BHI 2014: 618-621
Coauthor Index
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