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ORCIDZamin Iqbal
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2020 – today
- 2022
[j8]Maximillian G. Marin
, Roger Vargas, Michael Harris, Brendan Jeffrey, L. Elaine Epperson, David Durbin, Michael Strong, Max Salfinger, Zamin Iqbal, Irada Akhundova, Sergo Vashakidze, Valeriu Crudu, Alex Rosenthal, Maha R. Farhat:
Benchmarking the empirical accuracy of short-read sequencing across the M. tuberculosis genome. Bioinform. 38(7): 1781-1787 (2022)- [j7]Martin Hunt, Jeremy Swann, Bede Constantinides, Philip Fowler, Zamin Iqbal:
ReadItAndKeep: rapid decontamination of SARS-CoV-2 sequencing reads. Bioinform. 38(12): 3291-3293 (2022) - 2020
- [j6]Camille Marchet, Zamin Iqbal, Daniel Gautheret, Mikaël Salson, Rayan Chikhi:
REINDEER: efficient indexing of k-mer presence and abundance in sequencing datasets. Bioinform. 36(Supplement-1): i177-i185 (2020)
2010 – 2019
- 2019
- [c2]Timo Bingmann, Phelim Bradley, Florian Gauger, Zamin Iqbal:
COBS: A Compact Bit-Sliced Signature Index. SPIRE 2019: 285-303 - [i1]Timo Bingmann, Phelim Bradley, Florian Gauger, Zamin Iqbal:
COBS: a Compact Bit-Sliced Signature Index. CoRR abs/1905.09624 (2019) - 2018
- [j5]Yang Yang, Katherine E. Niehaus, Timothy M. Walker, Zamin Iqbal, A. Sarah Walker, Daniel J. Wilson, Tim E. A. Peto, Derrick W. Crook, E. Grace Smith, Tingting Zhu, David A. Clifton:
Machine learning for classifying tuberculosis drug-resistance from DNA sequencing data. Bioinform. 34(10): 1666-1671 (2018) - [j4]Isaac Turner, Kiran V. Garimella, Zamin Iqbal, Gil McVean:
Integrating long-range connectivity information into de Bruijn graphs. Bioinform. 34(15): 2556-2565 (2018) - 2016
- [j3]John D. O'Brien, Zamin Iqbal, Jason P. Wendler, Lucas Amenga-Etego:
Inferring Strain Mixture within Clinical Plasmodium falciparum Isolates from Genomic Sequence Data. PLoS Comput. Biol. 12(6) (2016) - [j2]Alexander T. Dilthey, Pierre-Antoine Gourraud, Alexander J. Mentzer, Nezih Cereb, Zamin Iqbal, Gil McVean:
High-Accuracy HLA Type Inference from Whole-Genome Sequencing Data Using Population Reference Graphs. PLoS Comput. Biol. 12(10) (2016) - [c1]Sorina Maciuca, Carlos del Ojo Elias, Gil McVean, Zamin Iqbal:
A Natural Encoding of Genetic Variation in a Burrows-Wheeler Transform to Enable Mapping and Genome Inference. WABI 2016: 222-233 - 2013
- [j1]Zamin Iqbal, Isaac Turner, Gil McVean:
High-throughput microbial population genomics using the Cortex variation assembler. Bioinform. 29(2): 275-276 (2013)
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