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ORCIDSamuel J. Aronson
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Journal Articles
- 2022
[j8]Kavishwar B. Wagholikar
, Layne Ainsworth, David Zelle, Kira Chaney, Michael Mendis, Jeffrey G. Klann, Alexander J. Blood, Angela Miller, Rupendra Chulyadyo, Michael Oates, William J. Gordon, Samuel J. Aronson, Benjamin M. Scirica, Shawn N. Murphy:
I2b2-etl: Python application for importing electronic health data into the informatics for integrating biology and the bedside platform. Bioinform. 38(20): 4833-4836 (2022)- [j7]Ken Wiley, Laura Findley, Madison Goldrich, Tejinder K. Rakhra-Burris, Ana Stevens, Pamela Williams, Carol J. Bult, Rex L. Chisholm, Patricia Deverka, Geoffrey S. Ginsburg, Eric D. Green, Gail P. Jarvik, George A. Mensah, Erin Ramos, Mary V. Relling, Dan M. Roden, Robb Rowley, Gil Alterovitz, Samuel J. Aronson, Lisa Bastarache, James J. Cimino, Erin L. Crowgey, Guilherme Del Fiol, Robert R. Freimuth, Mark A. Hoffman, Janina M. Jeff, Kevin B. Johnson, Kensaku Kawamoto, Subha Madhavan, Eneida A. Mendonça, Lucila Ohno-Machado, Siddharth Pratap, Casey Overby Taylor, Marylyn D. Ritchie, Nephi Walton, Chunhua Weng, Teresa Zayas-Cabán, Teri A. Manolio, Marc S. Williams:
A research agenda to support the development and implementation of genomics-based clinical informatics tools and resources. J. Am. Medical Informatics Assoc. 29(8): 1342-1349 (2022) - 2021
- [j6]Samuel J. Aronson, Benjamin M. Scirica, William J. Gordon, Alexander J. Blood, Kira Chaney, Eugene Clark, Corey Glynn, Remlee Green, John St. Laurent, Charlotte Mailly, Marian McPartlin, Shawn Murphy, Hunter Nichols, Michael Oates, Samantha Subramaniam, Matthew Varugheese, Kavishwar B. Wagholikar:
Workflow Automation for a Virtual Hypertension Management Program. Appl. Clin. Inform. 12(5): 1041-1048 (2021) - [j5]Mullai Murugan, Lawrence J. Babb, Casey Overby Taylor, Luke V. Rasmussen, Robert R. Freimuth, Eric Venner, Fei Yan, Victoria Yi, Stephen J. Granite, Hana Zouk, Samuel J. Aronson, Kevin Power, Alexander Fedotov, David R. Crosslin, David Fasel, Gail P. Jarvik, Hakon Hakonarson, Hana Bangash, Iftikhar J. Kullo, John J. Connolly, Jordan G. Nestor, Pedro J. Caraballo, Wei-Qi Wei, Ken Wiley, Heidi L. Rehm, Richard A. Gibbs:
Genomic considerations for FHIR®; eMERGE implementation lessons. J. Biomed. Informatics 118: 103795 (2021) - 2018
- [j4]Samuel J. Aronson, Lawrence J. Babb, Darren C. Ames, Richard A. Gibbs, Eric Venner, John J. Connelly, Keith Marsolo, Chunhua Weng, Marc S. Williams, Andrea L. Hartzler, Wayne H. Liang, James D. Ralston, Emily Beth Devine, Shawn N. Murphy, Christopher G. Chute, Pedro J. Caraballo, Iftikhar J. Kullo, Robert R. Freimuth, Luke V. Rasmussen, Firas H. Wehbe, Josh F. Peterson, Jamie R. Robinson, Ken Wiley, Casey Overby Taylor, eMERGE Network EHRI Working Group:
Empowering genomic medicine by establishing critical sequencing result data flows: the eMERGE example. J. Am. Medical Informatics Assoc. 25(10): 1375-1381 (2018) - 2016
- [j3]Stephanie Klinkenberg-Ramirez, Lynn A. Volk, Sara Samaha, Lisa P. Newmark, Stephanie E. Pollard, Matthew Varugheese, Samantha Baxter, Samuel J. Aronson, Heidi L. Rehm, David W. Bates, Pamela M. Neri:
Evaluation: A Qualitative Pilot Study of Novel Information Technology Infrastructure to Communicate Genetic Variant Updates. Appl. Clin. Inform. 07(02): 461-476 (2016) - 2015
- [j2]Brian H. Shirts, Joseph S. Salama, Samuel J. Aronson, Wendy K. Chung, Stacy W. Gray, Lucia A. Hindorff, Gail P. Jarvik, Sharon E. Plon, Elena M. Stoffel, Peter Tarczy-Hornoch, Eliezer M. Van Allen, Karen E. Weck, Christopher G. Chute, Robert R. Freimuth, Robert Grundmeier, Andrea L. Hartzler, Rongling Li, Peggy L. Peissig, Josh F. Peterson, Luke V. Rasmussen, Justin B. Starren, Marc S. Williams, Casey Lynnette Overby:
CSER and eMERGE: current and potential state of the display of genetic information in the electronic health record. J. Am. Medical Informatics Assoc. 22(6): 1231-1242 (2015) - 2012
- [j1]Pamela M. Neri, Stephanie E. Pollard, Lynn A. Volk, Lisa P. Newmark, Matthew Varugheese, Samantha Baxter, Samuel J. Aronson, Heidi L. Rehm, David W. Bates:
Usability of a novel clinician interface for genetic results. J. Biomed. Informatics 45(5): 950-957 (2012)
Conference and Workshop Papers
- 2019
- [c7]William Gordon, Maria Aguad, Heather Appello, Samuel J. Aronson, Jane Baronas, Indira Guleria, Richard Kaufman, Edgar Milford, Michael Oates, Rory Dela Paz, Melissa Yeung, William Lane:
Initial Usage Patterns of a SMART-on-FHIR Point-Of-Care Platelet Transfusion Optimization Application. AMIA 2019 - [c6]Kavishwar B. Wagholikar, Samuel J. Aronson, Benjamin Morgan Scirica, Akshay S. Desai, Shawn N. Murphy:
Patient Stratification Process for enabling Clinical Interventions. AMIA 2019 - [c5]Kavishwar B. Wagholikar, Christina M. Fischer, Alyssa P. Goodson, Christopher Herrick, Taylor Maclean, Katelyn Smith, Liliana Fera, Thomas Gaziano, Jacqueline Dunning, Joshua Bosque-Hamilton, Lina Matta, Eloy Toscano, Brent Richter, Layne Ainsworth, Michael Oates, Samuel J. Aronson, Calum A. MacRae, Benjamin Morgan Scirica, Akshay S. Desai, Shawn N. Murphy:
Dynamic Phenotyping to facilitate Accrual for Prospective Clinical studies: A Case Study in Heart Failure. AMIA 2019 - 2018
- [c4]William Gordon, Samuel J. Aronson, William Lane:
A FHIR-based Application to Improve Platelet Utilization and Transfusion Workflow. AMIA 2018 - 2017
- [c3]Luke V. Rasmussen, Darren C. Ames, Samuel J. Aronson, Lawrence J. Babb, Casey L. Overby:
Design and Implementation of a Structured Sequencing Report Format: A Multi-Stakeholder Perspective from eMERGE. AMIA 2017 - 2013
- [c2]Allison R. Wilcox, Pamela M. Neri, Lynn A. Volk, Lisa P. Newmark, Eugene Clark, Lawrence J. Babb, Matthew Varugheese, Samuel J. Aronson, Heidi L. Rehm, David W. Bates:
A Novel Clinician Interface to Improve Access to Up-to-date Genetic Results. AMIA 2013 - 2012
- [c1]Pamela M. Neri, Sara Samaha, Lynn A. Volk, Lisa P. Newmark, Stephanie E. Pollard, Matthew Varugheese, Samantha Baxter, Samuel J. Aronson, Heidi L. Rehm, David W. Bates:
Lessons Learned in the Implementation of Novel IT Infrastructure to Communicate Genetic Variant Updates. AMIA 2012
Reference Works
- 2018
- [r2]Mollie Ullman-Cullere, Eugene Clark, Samuel J. Aronson:
Implications of Genomics for Clinical Informatics. Encyclopedia of Database Systems (2nd ed.) 2018 - 2009
- [r1]Mollie Ullman-Cullere, Eugene Clark, Samuel J. Aronson:
Implications of Genomics for Clinical Informatics. Encyclopedia of Database Systems 2009: 1400-1404
Informal and Other Publications
- 2023
- [i1]Samuel J. Aronson, Kalotina Machini, Pranav Sriraman, Jiyeon Shin, Emma R. Henricks, Charlotte Mailly, Angie J. Nottage, Michael Oates, Matthew S. Lebo:
Using GPT-4 Prompts to Determine Whether Articles Contain Functional Evidence Supporting or Refuting Variant Pathogenicity. CoRR abs/2312.13521 (2023)
Coauthor Index
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