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Journal Articles
- 2021
[j10]Tyler Borrman, Brian G. Pierce
, Thom Vreven, Brian M. Baker, Zhiping Weng:
High-throughput modeling and scoring of TCR-pMHC complexes to predict cross-reactive peptides. Bioinform. 36(22-23): 5377-5385 (2021)- 2020
- [j9]Sweta Vangaveti, Thom Vreven, Yang Zhang, Zhiping Weng:
Integrating ab initio and template-based algorithms for protein-protein complex structure prediction. Bioinform. 36(3): 751-757 (2020) - 2019
- [j8]Thom Vreven, Stephen C. Miller:
Computational investigation into the fluorescence of luciferin analogues. J. Comput. Chem. 40(2): 527-531 (2019) - 2017
- [j7]Iain H. Moal, Didier Barradas-Bautista, Brian Jiménez-García, Mieczyslaw Torchala, Arjan van der Velde, Thom Vreven, Zhiping Weng, Paul A. Bates, Juan Fernández-Recio:
IRaPPA: information retrieval based integration of biophysical models for protein assembly selection. Bioinform. 33(12): 1806-1813 (2017) - 2014
- [j6]Thom Vreven, Howook Hwang, Brian G. Pierce, Zhiping Weng:
Evaluating template-based and template-free protein-protein complex structure prediction. Briefings Bioinform. 15(2): 169-176 (2014) - [j5]Brian G. Pierce, Kevin Wiehe, Howook Hwang, Bong-Hyun Kim, Thom Vreven, Zhiping Weng:
ZDOCK server: interactive docking prediction of protein-protein complexes and symmetric multimers. Bioinform. 30(12): 1771-1773 (2014) - [j4]Brian G. Pierce, Thom Vreven, Zhiping Weng:
Modeling T cell receptor recognition of CD1-lipid and MR1-metabolite complexes. BMC Bioinform. 15: 319 (2014) - 2003
- [j3]Thom Vreven, Keiji Morokuma, Ödön Farkas, H. Bernhard Schlegel, Michael J. Frisch:
Geometry optimization with QM/MM, ONIOM, and other combined methods. I. Microiterations and constraints. J. Comput. Chem. 24(6): 760-769 (2003) - 2001
- [j2]Keiji Morokuma, Djamaladdin G. Musaev, Thom Vreven, Harold Basch, Maricel Torrent, Dmitry V. Khoroshun:
Model studies of the structures, reacitivities, and reaction mechanisms of metalloenzymes. IBM J. Res. Dev. 45(3): 367-396 (2001) - 2000
- [j1]Thom Vreven, Keiji Morokuma:
On the application of the IMOMO (integrated molecular orbital + molecular orbital) method. J. Comput. Chem. 21(16): 1419-1432 (2000)
Coauthor Index
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