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2010 – 2019
- 2019
[j17]Esther Wershof, Danielle Park
, Robert P. Jenkins, David J. Barry, Erik Sahai, Paul A. Bates:
Matrix feedback enables diverse higher-order patterning of the extracellular matrix. PLoS Comput. Biol. 15(10) (2019)- [c3]Marica Muffoletto, Xiao Fu, Aditi Roy, Marta Varela, Paul A. Bates, Oleg V. Aslanidi:
Development of a Deep Learning Method to Predict Optimal Ablation Patterns for Atrial Fibrillation. CIBCB 2019: 1-4 - 2017
- [j16]Iain H. Moal, Didier Barradas-Bautista, Brian Jiménez-García, Mieczyslaw Torchala, Arjan van der Velde, Thom Vreven, Zhiping Weng, Paul A. Bates, Juan Fernández-Recio:
IRaPPA: information retrieval based integration of biophysical models for protein assembly selection. Bioinform. 33(12): 1806-1813 (2017) - 2016
- [c2]Timothy R. Law, Jonny Hancox, Tammy M. K. Cheng, Raphael A. G. Chaleil, Steven A. Wright, Paul A. Bates, Stephen A. Jarvis:
Optimisation of a Molecular Dynamics Simulation of Chromosome Condensation. SBAC-PAD 2016: 126-133 - 2013
- [j15]Mieczyslaw Torchala, Iain H. Moal, Raphael A. G. Chaleil, Juan Fernández-Recio, Paul A. Bates:
SwarmDock: a server for flexible protein-protein docking. Bioinform. 29(6): 807-809 (2013) - [j14]Iain H. Moal, Mieczyslaw Torchala, Paul A. Bates, Juan Fernández-Recio:
The scoring of poses in protein-protein docking: current capabilities and future directions. BMC Bioinform. 14: 286 (2013) - [j13]Mieczyslaw Torchala, Przemyslaw Chelminiak, Michal Kurzynski, Paul A. Bates:
RaTrav: a tool for calculating mean first-passage times on biochemical networks. BMC Syst. Biol. 7: 130 (2013) - [j12]Rudi Agius, Mieczyslaw Torchala, Iain H. Moal, Juan Fernández-Recio, Paul A. Bates:
Characterizing Changes in the Rate of Protein-Protein Dissociation upon Interface Mutation Using Hotspot Energy and Organization. PLoS Comput. Biol. 9(9) (2013) - 2012
- [j11]Iain H. Moal, Paul A. Bates:
Kinetic Rate Constant Prediction Supports the Conformational Selection Mechanism of Protein Binding. PLoS Comput. Biol. 8(1) (2012) - [j10]Tammy M. K. Cheng, Lucas Goehring, Linda Jeffery, Yu-En Lu, Jacqueline Hayles, Béla Novák, Paul A. Bates:
A Structural Systems Biology Approach for Quantifying the Systemic Consequences of Missense Mutations in Proteins. PLoS Comput. Biol. 8(10) (2012) - 2011
- [j9]Iain H. Moal, Rudi Agius, Paul A. Bates:
Protein-protein binding affinity prediction on a diverse set of structures. Bioinform. 27(21): 3002-3009 (2011) - 2010
- [j8]Xiaofan F. Li, Iain H. Moal, Paul A. Bates:
Bridging the gaps: atomic simulation of macromolecular environment brings together protein docking, interaction kinetics and the crowding effects. BMC Bioinform. 11(S-10): O2 (2010)
2000 – 2009
- 2009
- [j7]Katie Bentley, Giovanni Mariggi, Holger Gerhardt, Paul A. Bates:
Tipping the Balance: Robustness of Tip Cell Selection, Migration and Fusion in Angiogenesis. PLoS Comput. Biol. 5(10) (2009) - 2008
- [c1]Katie Bentley, Paul A. Bates, Holger Gerhardt:
Artificial life as cancer research - embodied agent modelling of blood vessel growth in tumours. ALIFE 2008: 751 - 2006
- [j6]Alexander L. Tournier, Paul W. Fitzjohn, Paul A. Bates:
Probability-based model of protein-protein interactions on biological timescales. Algorithms Mol. Biol. 1 (2006) - [j5]Marc N. Offman, Paul W. Fitzjohn, Paul A. Bates:
Developing a move-set for protein model refinement. Bioinform. 22(15): 1838-1845 (2006) - [j4]Pall F. Jonsson, Paul A. Bates:
Global topological features of cancer proteins in the human interactome. Bioinform. 22(18): 2291-2297 (2006) - [j3]Pall F. Jonsson, Tamara Cavanna, Daniel Zicha, Paul A. Bates:
Cluster analysis of networks generated through homology: automatic identification of important protein communities involved in cancer metastasis. BMC Bioinform. 7: 2 (2006) - [j2]Christopher S. Page, Paul A. Bates:
Can MM-PBSA calculations predict the specificities of protein kinase inhibitors? J. Comput. Chem. 27(16): 1990-2007 (2006) - 2002
- [j1]Bruno Contreras-Moreira, Paul A. Bates:
Domain Fishing: a first step in protein comparative modelling. Bioinform. 18(8): 1141-1142 (2002)
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