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ORCIDArndt von Haeseler
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2020 – today
- 2024
[j33]Florian G. Pflug
, Simon Haendeler, Christopher Esk, Dominik Lindenhofer, Juergen A. Knoblich, Arndt von Haeseler:
Neutral competition explains the clonal composition of neural organoids. PLoS Comput. Biol. 20(4): 1012054 (2024)- [j32]Alina F. Leuchtenberger, Arndt von Haeseler:
Learning From an Artificial Neural Network in Phylogenetics. IEEE ACM Trans. Comput. Biol. Bioinform. 21(2): 278-288 (2024) - 2023
- [j31]Luis F. Paulin, Muthuswamy Raveendran, R. Alan Harris, Jeffrey Rogers, Arndt von Haeseler, Fritz J. Sedlazeck:
SVhound: detection of regions that harbor yet undetected structural variation. BMC Bioinform. 24(1): 23 (2023) - 2022
- [j30]Andre Gosselink, Tatsiana Hofer, Elvira Criado-Moronati, Arndt von Haeseler, Jutta Kollet:
InspectorCell: Finding Ground Truth in Multiplexed Microscopy Images. J. Open Source Softw. 7(80): 4949 (2022)
2010 – 2019
- 2019
- [j29]Tobias Neumann, Veronika A. Herzog, Matthias Muhar, Arndt von Haeseler, Johannes Zuber, Stefan L. Ameres, Philipp Rescheneder:
Quantification of experimentally induced nucleotide conversions in high-throughput sequencing datasets. BMC Bioinform. 20(1): 258:1-258:16 (2019) - 2018
- [j28]Florian G. Pflug, Arndt von Haeseler:
TRUmiCount: correctly counting absolute numbers of molecules using unique molecular identifiers. Bioinform. 34(18): 3137-3144 (2018) - 2017
- [j27]Celine Prakash, Arndt von Haeseler:
An Enumerative Combinatorics Model for Fragmentation Patterns in RNA Sequencing Provides Insights into Nonuniformity of the Expected Fragment Starting-Point and Coverage Profile. J. Comput. Biol. 24(3): 200-212 (2017) - 2016
- [j26]Jana Trifinopoulos, Lam-Tung Nguyen, Arndt von Haeseler, Bui Quang Minh:
W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis. Nucleic Acids Res. 44(Webserver-Issue): W232-W235 (2016) - [c6]Diep Thi Hoang, Le Sy Vinh, Tomás Flouri, Alexandros Stamatakis, Arndt von Haeseler, Bui Quang Minh:
A new phylogenetic tree sampling method for maximum parsimony bootstrapping and proof-of-concept implementation. KSE 2016: 1-6 - 2015
- [j25]Olga Chernomor, Bui Quang Minh, Arndt von Haeseler:
Consequences of Common Topological Rearrangements for Partition Trees in Phylogenomic Inference. J. Comput. Biol. 22(12): 1129-1142 (2015) - 2013
- [j24]Fritz J. Sedlazeck, Philipp Rescheneder, Arndt von Haeseler:
NextGenMap: fast and accurate read mapping in highly polymorphic genomes. Bioinform. 29(21): 2790-2791 (2013) - 2012
- [j23]Mareike Fischer, Steffen Klaere, Minh Anh Nguyen, Arndt von Haeseler:
On the group theoretical background of assigning stepwise mutations onto phylogenies. Algorithms Mol. Biol. 7: 36 (2012) - [j22]Thomas Laubach, Arndt von Haeseler, Martin J. Lercher:
TreeSnatcher plus: capturing phylogenetic trees from images. BMC Bioinform. 13: 110 (2012) - [c5]Philipp Rescheneder, Arndt von Haeseler, Fritz J. Sedlazeck:
MASon: Million Alignments in Seconds - A Platform Independent Pairwise Sequence Alignment Library for next Generation Sequencing Data. BIOINFORMATICS 2012: 195-201 - 2010
- [j21]Anne Kupczok, Heiko A. Schmidt, Arndt von Haeseler:
Accuracy of phylogeny reconstruction methods combining overlapping gene data sets. Algorithms Mol. Biol. 5: 37 (2010) - [j20]Tina Koestler, Arndt von Haeseler, Ingo Ebersberger:
FACT: Functional annotation transfer between proteins with similar feature architectures. BMC Bioinform. 11: 417 (2010) - [c4]Huy Q. Dinh, Bui Quang Minh, Hoang Xuan Huan, Arndt von Haeseler:
ACOPHY: A Simple and General Ant Colony Optimization Approach for Phylogenetic Tree Reconstruction. ANTS Conference 2010: 360-367
2000 – 2009
- 2009
- [j19]Anne Kupczok, Arndt von Haeseler:
Comment on 'A congruence index for testing topological similarity between trees'. Bioinform. 25(1): 147-149 (2009) - [j18]Bui Quang Minh, Fabio Pardi, Steffen Klaere, Arndt von Haeseler:
Budgeted Phylogenetic Diversity on Circular Split Systems. IEEE ACM Trans. Comput. Biol. Bioinform. 6(1): 22-29 (2009) - 2008
- [j17]Anne Kupczok, Arndt von Haeseler, Steffen Klaere:
An Exact Algorithm for the Geodesic Distance between Phylogenetic Trees. J. Comput. Biol. 15(6): 577-591 (2008) - [c3]Dominic Mainz, Ingo Paulsen, Indra Mainz, Katrin Weller, Jochen Kohl, Arndt von Haeseler:
Knowledge Acquisition Focused Cooperative Development of Bio-ontologies - A Case Study with BIO2Me. BIRD 2008: 258-272 - 2007
- [j16]Heiko A. Schmidt, Arndt von Haeseler, Jutta Buschbom:
pIPHULA - parallel inference of population parameters using a likelihood approach. Bioinform. 23(19): 2636-2637 (2007) - [j15]Thomas Laubach, Arndt von Haeseler:
TreeSnatcher: coding trees from images. Bioinform. 23(24): 3384-3385 (2007) - 2006
- [j14]Tanja Gesell, Arndt von Haeseler:
In silico sequence evolution with site-specific interactions along phylogenetic trees. Bioinform. 22(6): 716-722 (2006) - [j13]Ingo Paulsen, Arndt von Haeseler:
INVHOGEN: a database of homologous invertebrate genes. Nucleic Acids Res. 34(Database-Issue): 349-353 (2006) - [j12]Jochen Kohl, Ingo Paulsen, Thomas Laubach, Achim Radtke, Arndt von Haeseler:
HvrBase++: a phylogenetic database for primate species. Nucleic Acids Res. 34(Database-Issue): 700-704 (2006) - 2005
- [j11]Bui Quang Minh, Le Sy Vinh, Arndt von Haeseler, Heiko A. Schmidt:
pIQPNNI: parallel reconstruction of large maximum likelihood phylogenies. Bioinform. 21(19): 3794-3796 (2005) - [j10]Le Sy Vinh, Arndt von Haeseler:
Shortest triplet clustering: reconstructing large phylogenies using representative sets. BMC Bioinform. 6: 92 (2005) - 2004
- [c2]Le Sy Vinh, Heiko A. Schmidt, Arndt von Haeseler:
PhyNav: A Novel Approach to Reconstruct Large Phylogenies. GfKl 2004: 386-393 - 2003
- [j9]Heiko A. Schmidt, Ekkehard Petzold, Martin Vingron, Arndt von Haeseler:
Molecular phylogenetics: parallelized parameter estimation and quartet puzzling. J. Parallel Distributed Comput. 63(7-8): 719-727 (2003) - 2002
- [j8]Heiko A. Schmidt, Korbinian Strimmer, Martin Vingron, Arndt von Haeseler:
TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinform. 18(3): 502-504 (2002) - 2000
- [c1]Roland Fleißner, Dirk Metzler, Arndt von Haeseler:
Can One Estimate Distances from Pairwise Sequence Alignments? German Conference on Bioinformatics 2000: 89-96
1990 – 1999
- 1999
- [j7]Florian Burckhardt, Arndt von Haeseler, Sonja Meyer:
HvrBase: compilation of mtDNA control region sequences from primates. Nucleic Acids Res. 27(1): 138-142 (1999) - [j6]T. Fujino, N. Navaratnam, A. Jarmuz, Arndt von Haeseler, James Scott:
C-->U editing of apolipoprotein B mRNA in marsupials: identification and characterisation of APOBEC-1 from the American opossum Monodelphus domestica. Nucleic Acids Res. 27(13): 2662-2671 (1999) - 1998
- [j5]Arndt von Haeseler, M. Schoniger:
Evolution of DNA or Amino Acid Sequences with Dependent Sites. J. Comput. Biol. 5(1): 149-163 (1998) - [j4]Oliva Handt, Sonja Meyer, Arndt von Haeseler:
Compilation of human mtDNA control region sequences. Nucleic Acids Res. 26(1): 126-129 (1998) - 1997
- [j3]Martin Vingron, Arndt von Haeseler:
Towards Integration of Multiple Alignment and Phylogenetic Tree Construction. J. Comput. Biol. 4(1): 23-34 (1997) - 1995
- [j2]M. Schoniger, Arndt von Haeseler:
Simulating efficiently the evolution of DNA sequences. Comput. Appl. Biosci. 11(1): 111-115 (1995) - [j1]Gunter Weiss, Arndt von Haeseler:
Modeling the Polymerase Chain Reaction. J. Comput. Biol. 2(1): 49-61 (1995)
1980 – 1989
- 1988
- [b1]Arndt von Haeseler:
Rekonstruktion phylogenetischer Bäume mit Hilfe von Varianten der Vier-Punkt-Bedingung. Bielefeld University, Germany, 1988, pp. 1-110
Coauthor Index
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