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2020 – today

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2023
[j36]
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Antonio Tristán-Vega, Tomasz Pieciak, Guillem París, Justino R. Rodríguez-Galván, Santiago Aja-Fernández:
HYDI-DSI revisited: Constrained non-parametric EAP imaging without q-space re-gridding. Medical Image Anal. 84: 102728 (2023)
[j35]
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Tomasz Pieciak, Guillem París, Dani Beck, Ivan I. Maximov, Antonio Tristán-Vega, Rodrigo de Luis García, Lars T. Westlye, Santiago Aja-Fernández:
Spherical means-based free-water volume fraction from diffusion MRI increases non-linearly with age in the white matter of the healthy human brain. NeuroImage 279: 120324 (2023)
2022
[j34]
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Santiago Aja-Fernández, Tomasz Pieciak, Carmen Martín-Martín, Álvaro Planchuelo-Gómez, Rodrigo de Luis García, Antonio Tristán-Vega:
Moment-based representation of the diffusion inside the brain from reduced DMRI acquisitions: Generalized AMURA. Medical Image Anal. 77: 102356 (2022)
2021
[j33]
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Antonio Tristán-Vega, Santiago Aja-Fernández:
Efficient and accurate EAP imaging from multi-shell dMRI with micro-structure adaptive convolution kernels and dual Fourier Integral Transforms (MiSFIT). NeuroImage 227: 117616 (2021)
[j32]
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Alberto De Luca, Andrada Ianus, Alexander Leemans, Marco Palombo, Noam Shemesh, Hui Zhang, Daniel C. Alexander, Markus Nilsson, Martijn Froeling, Geert Jan Biessels, Mauro Zucchelli, Matteo Frigo, Enes Albay, Sara Sedlar, Abib Alimi, Samuel Deslauriers-Gauthier, Rachid Deriche, Rutger Fick, Maryam Afzali, Tomasz Pieciak, Fabian Bogusz, Santiago Aja-Fernández, Evren Özarslan, Derek K. Jones, Haoze Chen, Mingwu Jin, Zhijie Zhang, Fengxiang Wang, Vishwesh Nath, Prasanna Parvathaneni, Jan Morez, Jan Sijbers, Ben Jeurissen, Shreyas Fadnavis, Stefan C. Endres, Ariel Rokem, Eleftherios Garyfallidis, Irina Sánchez, Vesna Prchkovska, Paulo Rodrigues, Bennett A. Landman, Kurt G. Schilling:
On the generalizability of diffusion MRI signal representations across acquisition parameters, sequences and tissue types: Chronicles of the MEMENTO challenge. NeuroImage 240: 118367 (2021)

2010 – 2019

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2019
[c41]
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Tomasz Pieciak, Fabian Bogusz, Antonio Tristán-Vega, Rodrigo de Luis García, Santiago Aja-Fernández:
Single-Shell Return-to-the-Origin Probability Diffusion Mri Measure Under a Non-Stationary Rician Distributed Noise. ISBI 2019: 131-134
2018
[j31]
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Inaki Rabanillo, Santiago Aja-Fernández, Carlos Alberola-López, Diego Hernando:
Exact Calculation of Noise Maps and ${g}$ -Factor in GRAPPA Using a ${k}$ -Space Analysis. IEEE Trans. Medical Imaging 37(2): 480-490 (2018)
[c40]
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Tomasz Pieciak, Inaki Rabanillo-Viloria, Santiago Aja-Fernández:
Bias correction for non-stationary noise filtering in MRI. ISBI 2018: 307-310
2017
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Tomasz Pieciak, Santiago Aja-Fernández, Gonzalo Vegas-Sánchez-Ferrero:
Non-Stationary Rician Noise Estimation in Parallel MRI Using a Single Image: A Variance-Stabilizing Approach. IEEE Trans. Pattern Anal. Mach. Intell. 39(10): 2015-2029 (2017)
[c39]
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Santiago Aja-Fernández, Oscar Pena-Nogales, Rodrigo de Luis García:
Effect of sampling on the estimation of the apparent coefficient of diffusion in MRI. ICASSP 2017: 896-899
[c38]
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Santiago Sanz-Estébanez, Oscar Pena-Nogales, Rodrigo de Luis García, Santiago Aja-Fernández, Carlos Alberola-López:
Groupwise non-rigid registration on multiparametric abdominal DWI acquisitions for robust ADC estimation: Comparison with pairwise approaches and different multimodal metrics. ISBI 2017: 1156-1159
2016
[b1]
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Santiago Aja-Fernández, Gonzalo Vegas-Sánchez-Ferrero:
Statistical Analysis of Noise in MRI - Modeling, Filtering and Estimation. Springer 2016, ISBN 978-3-319-39933-1, pp. 1-327
[j29]
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Luis González-Jaime, Gonzalo Vegas-Sánchez-Ferrero, Etienne E. Kerre, Santiago Aja-Fernández:
Spatially-variant noise filtering in magnetic resonance imaging: A consensus-based approach. Knowl. Based Syst. 106: 264-273 (2016)
[j28]
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Ariel Hernán Curiale, Gonzalo Vegas-Sánchez-Ferrero, Santiago Aja-Fernández:
Influence of ultrasound speckle tracking strategies for motion and strain estimation. Medical Image Anal. 32: 184-200 (2016)
[c37]
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Santiago Sanz-Estébanez, Lucilio Cordero-Grande, Santiago Aja-Fernández, Marcos Martín-Fernández, Carlos Alberola-López:
Spatial and spectral anisotropy in HARP images: An automated approach. ISBI 2016: 1105-1108
[c36]
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Tomasz Pieciak, Gonzalo Vegas-Sánchez-Ferrero, Santiago Aja-Fernández:
Variance stabilization of noncentral-chi data: Application to noise estimation in MRI. ISBI 2016: 1376-1379
2015
[j27]
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Santiago Aja-Fernández, Daniel García Martín, Antonio Tristán-Vega, Gonzalo Vegas-Sánchez-Ferrero:
Improving GRAPPA reconstruction by frequency discrimination in the ACS lines. Int. J. Comput. Assist. Radiol. Surg. 10(10): 1699-1710 (2015)
[j26]
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Santiago Aja-Fernández, Ariel Hernán Curiale, Gonzalo Vegas-Sánchez-Ferrero:
A local fuzzy thresholding methodology for multiregion image segmentation. Knowl. Based Syst. 83: 1-12 (2015)
[j25]
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Santiago Aja-Fernández, Tomasz Pieciak, Gonzalo Vegas-Sánchez-Ferrero:
Spatially variant noise estimation in MRI: A homomorphic approach. Medical Image Anal. 20(1): 184-197 (2015)
[j24]
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Ariel Hernán Curiale, Gonzalo Vegas-Sánchez-Ferrero, Johan G. Bosch, Santiago Aja-Fernández:
A maximum likelihood approach to diffeomorphic speckle tracking for 3D strain estimation in echocardiography. Medical Image Anal. 24(1): 90-105 (2015)
[j23]
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Gabriel Ramos-Llordén, Gonzalo Vegas-Sánchez-Ferrero, Marcos Martín-Fernández, Carlos Alberola-López, Santiago Aja-Fernández:
Anisotropic Diffusion Filter With Memory Based on Speckle Statistics for Ultrasound Images. IEEE Trans. Image Process. 24(1): 345-358 (2015)
[c35]
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Santiago Aja-Fernández, Gonzalo Vegas-Sánchez-Ferrero:
Blind estimation of spatially variant noise in GRAPPA MRI. ISBI 2015: 1478-1481
2014
[i1]
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Santiago Aja-Fernández, Gonzalo Vegas-Sánchez-Ferrero, Antonio Tristán-Vega:
Statistical Noise Analysis in SENSE Parallel MRI. CoRR abs/1402.4067 (2014)
2013
[j22]
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Lucilio Cordero-Grande, Susana Merino-Caviedes, Santiago Aja-Fernández, Carlos Alberola-López:
Groupwise Elastic Registration by a New Sparsity-Promoting Metric: Application to the Alignment of Cardiac Magnetic Resonance Perfusion Images. IEEE Trans. Pattern Anal. Mach. Intell. 35(11): 2638-2650 (2013)
[c34]
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Rodrigo de Luis García, Gonzalo Vegas-Sánchez-Ferrero, Santiago Aja-Fernández, Carlos Alberola-López:
Atlas-based segmentation of white matter structures from DTI using tensor invariants and orientation. EMBC 2013: 503-506
[c33]
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Antonio Tristán-Vega, Véronique Brion, Gonzalo Vegas-Sánchez-Ferrero, Santiago Aja-Fernández:
Merging squared-magnitude approaches to DWI denoising: An adaptive Wiener filter tuned to the anatomical contents of the image. EMBC 2013: 507-510
[c32]
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Santiago Aja-Fernández, Gonzalo Vegas-Sánchez-Ferrero, Rodrigo de Luis García, Antonio Tristán-Vega:
Noise estimation in magnetic resonance SENSE reconstructed data. EMBC 2013: 1104-1107
[c31]
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Gonzalo Vegas-Sánchez-Ferrero, Gabriel Ramos-Llordén, Rodrigo de Luis García, Antonio Tristán-Vega, Santiago Aja-Fernández:
Anisotropic diffusion filtering for correlated multiple-coil MRI. EMBC 2013: 2956-2959
[c30]
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Santiago Aja-Fernández, Lucilio Cordero-Grande, Gonzalo Vegas-Sánchez-Ferrero, Rodrigo de Luis García, Carlos Alberola-López:
Robust estimation of MRI myocardial perfusion parameters. EMBC 2013: 4382-4385
[c29]
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Ariel Hernán Curiale, Gonzalo Vegas-Sánchez-Ferrero, Santiago Aja-Fernández:
Speckle Tracking in Interpolated Echocardiography to Estimate Heart Motion. FIMH 2013: 325-333
[c28]
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Luis González-Jaime, Mike Nachtegael, Etienne E. Kerre, Gonzalo Vegas-Sánchez-Ferrero, Santiago Aja-Fernández:
Parametric Image Restoration Using Consensus: An Application to Nonstationary Noise Filtering. IbPRIA 2013: 358-365
[c27]
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Verónica García-Pérez, Antonio Tristán-Vega, Santiago Aja-Fernández, Carlos Alberola-López:
Homeomorphic Geometrical Transform for Collision Response in Surgical Simulation. IbPRIA 2013: 433-440
[c26]
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Ariel Hernán Curiale, Gonzalo Vegas-Sánchez-Ferrero, T. Perez-Sanz, Santiago Aja-Fernández:
Strain rate tensor estimation from echocardiography for quantitative assessment of functional mitral regurgitation. ISBI 2013: 788-791
2012
[j21]
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Gonzalo Vegas-Sánchez-Ferrero, Santiago Aja-Fernández, Cesar Palencia, Marcos Martín-Fernández:
A Generalized Gamma Mixture Model for Ultrasonic Tissue Characterization. Comput. Math. Methods Medicine 2012: 481923:1-481923:25 (2012)
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Antonio Tristán-Vega, Verónica García-Pérez, Santiago Aja-Fernández, Carl-Fredrik Westin:
Efficient and robust nonlocal means denoising of MR data based on salient features matching. Comput. Methods Programs Biomed. 105(2): 131-144 (2012)
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Gonzalo Vegas-Sánchez-Ferrero, Santiago Aja-Fernández, Marcos Martín-Fernández, Cesar Palencia:
A direct calculation of moments of the sample variance. Math. Comput. Simul. 82(5): 790-804 (2012)
[j18]
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Antonio Tristán-Vega, Santiago Aja-Fernández, Carl-Fredrik Westin:
Least squares for diffusion tensor estimation revisited: Propagation of uncertainty with Rician and non-Rician signals. NeuroImage 59(4): 4032-4043 (2012)
[c25]
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Santiago Aja-Fernández, Lucilio Cordero-Grande, Carlos Alberola-López:
A MRI phantom for cardiac perfusion simulation. ISBI 2012: 638-641
[c24]
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Antonio Tristán-Vega, Santiago Aja-Fernández, Carl-Fredrik Westin:
Deblurring of probabilistic ODFs in quantitative diffusion MRI. ISBI 2012: 932-935
[c23]
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Gonzalo Vegas-Sánchez-Ferrero, Antonio Tristán-Vega, Santiago Aja-Fernández, Marcos Martín-Fernández, Cesar Palencia, Rachid Deriche:
Anisotropic LMMSE denoising of MRI based on statistical tissue models. ISBI 2012: 1519-1522
2011
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Gonzalo Vegas-Sánchez-Ferrero, Diego Martín-Martínez, Pablo Casaseca-de-la-Higuera, Lucilio Cordero-Grande, Santiago Aja-Fernández, Marcos Martín-Fernández, Cesar Palencia:
Realistic log-compressed law for ultrasound image recovery. ICIP 2011: 2029-2032
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Santiago Aja-Fernández, Gonzalo Vegas-Sánchez-Ferrero, Antonio Tristán-Vega:
Noise estimation in MR GRAPPA reconstructed data. ISBI 2011: 1815-1818
[c20]
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Véronique Brion, Cyril Poupon, Olivier Riff, Santiago Aja-Fernández, Antonio Tristán-Vega, Jean-François Mangin, Denis Le Bihan, Fabrice Poupon:
Parallel MRI Noise Correction: An Extension of the LMMSE to Non Central χ Distributions. MICCAI (2) 2011: 226-233
2010
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Antonio Tristán-Vega, Santiago Aja-Fernández:
DWI filtering using joint information for DTI and HARDI. Medical Image Anal. 14(2): 205-218 (2010)
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Antonio Tristán-Vega, Carl-Fredrik Westin, Santiago Aja-Fernández:
A new methodology for the estimation of fiber populations in the white matter of the brain with the Funk-Radon transform. NeuroImage 49(2): 1301-1315 (2010)
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Gonzalo Vegas-Sánchez-Ferrero, Diego Martín-Martínez, Santiago Aja-Fernández, Cesar Palencia:
On the influence of interpolation on probabilistic models for ultrasonic images. ISBI 2010: 292-295
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Susana Merino-Caviedes, Gonzalo Vegas-Sánchez-Ferrero, M. Teresa Pérez, Santiago Aja-Fernández, Marcos Martín-Fernández:
A variationally based weighted re-initialization method for geometric active contours. ISBI 2010: 908-911
[c17]
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Gonzalo Vegas-Sánchez-Ferrero, Santiago Aja-Fernández, Marcos Martín-Fernández, Alejandro F. Frangi, Cesar Palencia:
Probabilistic-Driven Oriented Speckle Reducing Anisotropic Diffusion with Application to Cardiac Ultrasonic Images. MICCAI (1) 2010: 518-525

2000 – 2009

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2009
[j15]
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Santiago Aja-Fernández, Gonzalo Vegas-Sánchez-Ferrero, Marcos Martín-Fernández, Carlos Alberola-López:
Automatic noise estimation in images using local statistics. Additive and multiplicative cases. Image Vis. Comput. 27(6): 756-770 (2009)
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Antonio Tristán-Vega, Carl-Fredrik Westin, Santiago Aja-Fernández:
Estimation of fiber Orientation Probability Density Functions in High Angular Resolution Diffusion Imaging. NeuroImage 47(2): 638-650 (2009)
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Karl Krissian, Santiago Aja-Fernández:
Noise-Driven Anisotropic Diffusion Filtering of MRI. IEEE Trans. Image Process. 18(10): 2265-2274 (2009)
[j12]
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Verónica García-Pérez, Emma Muñoz-Moreno, Santiago Aja-Fernández, Carlos Alberola-López:
A 3-D Collision Handling Algorithm for Surgery Simulation Based on Feedback Fuzzy Logic. IEEE Trans. Inf. Technol. Biomed. 13(4): 451-457 (2009)
[c16]
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Antonio Tristán-Vega, Santiago Aja-Fernández, Carl-Fredrik Westin:
On the Blurring of the Funk-Radon Transform in Q-Ball Imaging. MICCAI (1) 2009: 415-422
[c15]
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Antonio Tristán-Vega, Carl-Fredrik Westin, Santiago Aja-Fernández:
Bias of Least Squares Approaches for Diffusion Tensor Estimation from Array Coils in DT-MRI. MICCAI (1) 2009: 919-926
[c14]
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Antonio Tristán-Vega, Santiago Aja-Fernández:
Design and Construction of a Realistic DWI Phantom for Filtering Performance Assessment. MICCAI (1) 2009: 951-958
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Emma Muñoz-Moreno, Santiago Aja-Fernández, Marcos Martín-Fernández:
Quality Assessment of Tensor Images. Tensors in Image Processing and Computer Vision 2009: 79-103
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Gonzalo Vegas-Sánchez-Ferrero, Antonio Tristán-Vega, Lucilio Cordero-Grande, Pablo Casaseca-de-la-Higuera, Santiago Aja-Fernández, Marcos Martín-Fernández, Carlos Alberola-López:
Strain Rate Tensor Estimation in Cine Cardiac MRI Based on Elastic Image Registration. Tensors in Image Processing and Computer Vision 2009: 355-379
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Santiago Aja-Fernández, Rodrigo de Luis García, Dacheng Tao, Xuelong Li:
Tensors in Image Processing and Computer Vision. Advances in Pattern Recognition, Springer 2009, ISBN 978-1-84882-298-6 [contents]
2008
[j11]
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Santiago Aja-Fernández, Carlos Alberola-López:
Matrix Modeling of Hierarchical Fuzzy Systems. IEEE Trans. Fuzzy Syst. 16(3): 585-599 (2008)
[j10]
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Santiago Aja-Fernández, Carlos Alberola-López, Carl-Fredrik Westin:
Noise and Signal Estimation in Magnitude MRI and Rician Distributed Images: A LMMSE Approach. IEEE Trans. Image Process. 17(8): 1383-1398 (2008)
[j9]
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Santiago Aja-Fernández, Marc Niethammer, Marek Kubicki, Martha Elizabeth Shenton, Carl-Fredrik Westin:
Restoration of DWI Data Using a Rician LMMSE Estimator. IEEE Trans. Medical Imaging 27(10): 1389-1403 (2008)
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Emma Muñoz-Moreno, Santiago Aja-Fernández, Marcos Martín-Fernández:
A methodology for quality assessment in tensor images. CVPR Workshops 2008: 1-6
[c12]
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Gonzalo Vegas-Sánchez-Ferrero, Antonio Tristán-Vega, Lucilio Cordero-Grande, Pablo Casaseca-de-la-Higuera, Santiago Aja-Fernández, Marcos Martín-Fernández, Carlos Alberola-López:
Strain Rate Tensor estimation in cine cardiac MRI based on elastic image registration. CVPR Workshops 2008: 1-6
[c11]
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Antonio Tristán-Vega, Gonzalo Vegas-Sánchez-Ferrero, Santiago Aja-Fernández:
Local similarity measures for demons-like registration algorithms. ISBI 2008: 1087-1090
[c10]
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Antonio Tristán-Vega, Santiago Aja-Fernández:
Joint LMMSE Estimation of DWI Data for DTI Processing. MICCAI (2) 2008: 27-34
2007
[c9]
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Santiago Aja-Fernández, Marcos Martín-Fernández, Carlos Alberola-López:
Tissue Identification in Ultrasound Images using Rayleigh Local Parameter Estimation. BIBE 2007: 1129-1133
[c8]
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Marc Niethammer, Sylvain Bouix, Santiago Aja-Fernández, Carl-Fredrik Westin, Martha Elizabeth Shenton:
Outlier Rejection for Diffusion Weighted Imaging. MICCAI (1) 2007: 161-168
[c7]
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Santiago Aja-Fernández, Carlos Alberola-López, Carl-Fredrik Westin:
Signal LMMSE Estimation from Multiple Samples in MRI and DT-MRI. MICCAI (2) 2007: 368-375
2006
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Santiago Aja-Fernández, Carlos Alberola-López:
Fuzzy feedback system analysis using transition matrices. Fuzzy Sets Syst. 157(4): 516-543 (2006)
[j7]
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Santiago Aja-Fernández, Carlos Alberola-López:
On the estimation of the coefficient of variation for anisotropic diffusion speckle filtering. IEEE Trans. Image Process. 15(9): 2694-2701 (2006)
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Santiago Aja-Fernández, Raúl San José Estépar, Carlos Alberola-López, Carl-Fredrik Westin:
Image Quality Assessment based on Local Variance. EMBC 2006: 4815-4818
[c5]
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Santiago Aja-Fernández, Carlos Alberola-López:
Matrix-based hierarchical fuzzy systems. ICINCO-ICSO 2006: 92-97
2005
[j6]
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Federico Simmross-Wattenberg, Noemí Carranza-Herrezuelo, Cristina Palacios-Camarero, Pablo Casaseca-de-la-Higuera, Miguel Ángel Martín-Fernández, Santiago Aja-Fernández, Juan Ruiz-Alzola, Carl-Fredrik Westin, Carlos Alberola-López:
Group-Slicer: A collaborative extension of 3D-Slicer. J. Biomed. Informatics 38(6): 431-442 (2005)
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Santiago Aja-Fernández, Carlos Alberola-López:
Fast Inference Using Transition Matrices: An Extension to Nonlinear Operators. IEEE Trans. Fuzzy Syst. 13(4): 478-490 (2005)
[c4]
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Santiago Aja-Fernández, Carlos Alberola-López:
Matrix Inference in Fuzzy Decision Trees. EUSFLAT Conf. 2005: 979-984
2004
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Santiago Aja-Fernández, Rodrigo de Luis García, Miguel Ángel Martín-Fernández, Carlos Alberola-López:
A computational TW3 classifier for skeletal maturity assessment. A Computing with Words approach. J. Biomed. Informatics 37(2): 99-107 (2004)
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Santiago Aja-Fernández, Carlos Alberola-López:
Fast inference in SAM fuzzy systems using transition matrices. IEEE Trans. Fuzzy Syst. 12(2): 170-182 (2004)
[c3]
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Santiago Aja-Fernández, Carlos Alberola-López:
Hierarchical fuzzy systems with FITM. FUZZ-IEEE 2004: 767-772
2003
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Santiago Aja-Fernández, Carlos Alberola-López, Juan Ruiz-Alzola:
A fuzzy-controlled Kalman filter applied to stereo-visual tracking schemes. Signal Process. 83(1): 101-120 (2003)
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Santiago Aja-Fernández, Carlos Alberola-López:
Inference with fuzzy granules for computing with words: a practical viewpoint. FUZZ-IEEE 2003: 566-571
2002
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Santiago Aja-Fernández, Carlos Alberola-López, George Cybenko:
A fuzzy MHT algorithm applied to text-based information tracking. IEEE Trans. Fuzzy Syst. 10(3): 360-374 (2002)
2001
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Santiago Aja-Fernández, Carlos Alberola-López, Juan Ruiz:
Fuzzy anisotropic diffusion for speckle filtering. ICASSP 2001: 1261-1264

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