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ORCIDJohan T. den Dunnen
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Journal Articles
- 2021
[j8]Mihai Lefter
, Jonathan K. Vis, Martijn Vermaat, Johan T. den Dunnen, Peter E. M. Taschner, Jeroen F. J. Laros:
Mutalyzer 2: next generation HGVS nomenclature checker. Bioinform. 37(18): 2811-2817 (2021)- 2014
- [j7]Seyed Yahya Anvar, Kristiaan J. van der Gaag, Jaap W. F. van der Heijden, Marcel H. A. M. Veltrop, Rolf H. A. M. Vossen, Rick H. de Leeuw, Cor Breukel, Henk P. J. Buermans, J. Sjef Verbeek, Peter de Knijff, Johan T. den Dunnen, Jeroen F. J. Laros:
TSSV: a tool for characterization of complex allelic variants in pure and mixed genomes. Bioinform. 30(12): 1651-1659 (2014) - 2011
- [j6]Rob Jelier, Jelle J. Goeman, Kristina M. Hettne, Martijn J. Schuemie, Johan T. den Dunnen, Peter A. C. 't Hoen:
Literature-aided interpretation of gene expression data with the weighted global test. Briefings Bioinform. 12(5): 518-529 (2011) - [j5]Jeroen F. J. Laros, André Blavier, Johan T. den Dunnen, Peter E. M. Taschner:
A formalized description of the standard human variant nomenclature in Extended Backus-Naur Form. BMC Bioinform. 12(S-4): S5 (2011) - [j4]Peter A. C. 't Hoen, Michael Hirsch, Emile J. de Meijer, Renée X. de Menezes, Gert-Jan B. van Ommen, Johan T. den Dunnen:
mRNA degradation controls differentiation state-dependent differences in transcript and splice variant abundance. Nucleic Acids Res. 39(2): 556-566 (2011) - 2008
- [j3]Matthew S. Hestand, Michiel van Galen, Michel P. Villerius, Gert-Jan B. van Ommen, Johan T. den Dunnen, Peter A. C. 't Hoen:
CORE_TF: a user-friendly interface to identify evolutionary conserved transcription factor binding sites in sets of co-regulated genes. BMC Bioinform. 9 (2008) - [j2]Rob Jelier, Peter A. C. 't Hoen, Ellen Sterrenburg, Johan T. den Dunnen, Gert-Jan B. van Ommen, Jan A. Kors, Barend Mons:
Literature-aided meta-analysis of microarray data: a compendium study on muscle development and disease. BMC Bioinform. 9 (2008) - [j1]Alexander E. Ivliev, Peter A. C. 't Hoen, Michel P. Villerius, Johan T. den Dunnen, Bernd W. Brandt:
Microarray retriever: a web-based tool for searching and large scale retrieval of public microarray data. Nucleic Acids Res. 36(Web-Server-Issue): 327-331 (2008)
Conference and Workshop Papers
- 2015
- [c2]Eelke van der Horst, Rajaram Kaliyaperumal, Zuotian Tatum, Mark Thompson, Erik A. Schultes, Eleni Mina, Ivo Fokkema, Johan T. den Dunnen, Marco Roos, Jeroen F. J. Laros, Barend Mons, Kristina M. Hettne, Peter A. C. 't Hoen:
Finding Novel Associations Across Domains Using Linked Data: a Case Study on Genetic Variants Disrupting Transcription Start Sites. SWAT4LS 2015: 2-12 - 2011
- [c1]Zuotian Tatum, Johan T. den Dunnen, Jeroen F. J. Laros:
CLI-mate: an interface generator for command line programs. SWAT4LS 2011: 114-115
Coauthor Index
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