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ORCIDKristina M. Hettne
Person information
- affiliation: Leiden University Medical Center, Department of Human Genetics, The Netherlands
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2020 – today
- 2020
[j16]Mitra Ebrahimpoor, Pietro Spitali
, Kristina M. Hettne, Roula Tsonaka, Jelle J. Goeman:
Simultaneous Enrichment Analysis of all Possible Gene-sets: Unifying Self-Contained and Competitive Methods. Briefings Bioinform. 21(4): 1302-1312 (2020)- [j15]Kristina Maria Hettne, Peter Verhaar, Erik Schultes, Laurents Sesink:
From FAIR Leading Practices to FAIR Implementation and Back: An Inclusive Approach to FAIR at Leiden University Libraries. Data Sci. J. 19: 40 (2020) - [j14]Annika Jacobsen, Ricardo de Miranda Azevedo, Nick S. Juty, Dominique Batista, Simon J. Coles, Ronald Cornet, Mélanie Courtot, Mercè Crosas, Michel Dumontier, Chris T. A. Evelo, Carole A. Goble, Giancarlo Guizzardi, Karsten Kryger Hansen, Ali Hasnain, Kristina M. Hettne, Jaap Heringa, Rob W. W. Hooft, Melanie Imming, Keith G. Jeffery, Rajaram Kaliyaperumal, Martijn G. Kersloot, Christine R. Kirkpatrick, Tobias Kuhn, Ignasi Labastida, Barbara Magagna, Peter McQuilton, Natalie Meyers, Annalisa Montesanti, Mirjam van Reisen, Philippe Rocca-Serra, Robert Pergl, Susanna-Assunta Sansone, Luiz Olavo Bonino da Silva Santos, Juliane Schneider, George O. Strawn, Mark Thompson, Andra Waagmeester, Tobias Weigel, Mark D. Wilkinson, Egon L. Willighagen, Peter Wittenburg, Marco Roos, Barend Mons, Erik Schultes:
FAIR Principles: Interpretations and Implementation Considerations. Data Intell. 2(1-2): 10-29 (2020) - [j13]Hana Pergl Sustkova, Kristina Maria Hettne, Peter Wittenburg, Annika Jacobsen, Tobias Kuhn, Robert Pergl, Jan Slifka, Peter McQuilton, Barbara Magagna, Susanna-Assunta Sansone, Markus Stocker, Melanie Imming, Larry Lannom, Mark A. Musen, Erik Schultes:
FAIR Convergence Matrix: Optimizing the Reuse of Existing FAIR-Related Resources. Data Intell. 2(1-2): 158-170 (2020) - [j12]Simone A. Cammel, Marit S. De Vos, Daphne van Soest, Kristina M. Hettne, Fred Boer, Ewout W. Steyerberg, Hileen Boosman:
How to automatically turn patient experience free-text responses into actionable insights: a natural language programming (NLP) approach. BMC Medical Informatics Decis. Mak. 20(1): 97 (2020) - [c11]Erik Schultes, Barbara Magagna, Kristina Maria Hettne, Robert Pergl, Marek Suchánek, Tobias Kuhn:
Reusable FAIR Implementation Profiles as Accelerators of FAIR Convergence. ER (Workshops) 2020: 138-147
2010 – 2019
- 2019
- [i4]Peter Wittenburg, Hana Pergl Sustkova, Annalisa Montesanti, Margreet Bloemers, S. H. de Waard, Mark A. Musen, John Graybeal, Kristina M. Hettne, Annika Jacobsen, Robert Pergl, Rob W. W. Hooft, Christine Staiger, Celia W. G. van Gelder, Sebastiaan L. Knijnenburg, A. C. van Arkel, Bert Meerman, Mark D. Wilkinson, Susanna-Assunta Sansone, Philippe Rocca-Serra, Peter McQuilton, Alejandra N. González-Beltrán, G. J. C. Aben, Patrícia Henning, Maria Simone de Menezes Alencar, C. Ribeiro, C. R. L. Silva, Luís Fernando Sayão, Luana Sales, Viviane Veiga, Jefferson Lima, Simone Dib, Paula Xavier dos Santos, R. Murtinho, Jakob Tendel, B. F. Schaap, P. M. Brouwer, A. K. Gavai, Yamine Bouzembrak, Hans J. P. Marvin, Albert Mons, Tobias Kuhn, Alessa A. Gambardella, Ricardo de Miranda Azevedo, Vesa Muhonen, Mira van der Naald, N. W. Smit, M. J. Buys, Taco F. de Bruin, Fieke Schoots, H. J. E. Goodson, Henry S. Rzepa, Keith G. Jeffery, Hugh P. Shanahan, M. Axton, Veniamin Tkachenko, Anne Deslattes Mays, Natalie Meyers, Michael Conlon, Laurel L. Haak, Erik A. Schultes:
The FAIR Funder pilot programme to make it easy for funders to require and for grantees to produce FAIR Data. CoRR abs/1902.11162 (2019) - 2017
- [c10]Tareq B. Malas, Roman Kudrin, Sergei Starikov, Dorien Peters, Marco Roos, Peter A. C. 't Hoen, Kristina M. Hettne:
Semantic Knowledge Graph Network Features for Drug Repurposing. SWAT4LS 2017 - 2016
- [j11]Saber A. Akhondi, Ewoud Pons, Zubair Afzal, Herman van Haagen, Benedikt F. H. Becker, Kristina M. Hettne, Erik M. van Mulligen, Jan A. Kors:
Chemical entity recognition in patents by combining dictionary-based and statistical approaches. Database J. Biol. Databases Curation 2016 (2016) - 2015
- [j10]Eleni Mina, Mark Thompson, Rajaram Kaliyaperumal, Jun Zhao, Eelke van der Horst, Zuotian Tatum, Kristina M. Hettne, Erik A. Schultes, Barend Mons, Marco Roos:
Nanopublications for exposing experimental data in the life-sciences: a Huntington's Disease case study. J. Biomed. Semant. 6: 5 (2015) - [j9]Saber A. Akhondi, Kristina M. Hettne, Eelke van der Horst, Erik M. van Mulligen, Jan A. Kors:
Recognition of chemical entities: combining dictionary-based and grammar-based approaches. J. Cheminformatics 7(S-1): S10 (2015) - [j8]Khalid Belhajjame, Jun Zhao, Daniel Garijo, Matthew Gamble, Kristina M. Hettne, Raúl Palma, Eleni Mina, Óscar Corcho, José Manuél Gómez-Pérez, Sean Bechhofer, Graham Klyne, Carole A. Goble:
Using a suite of ontologies for preserving workflow-centric research objects. J. Web Semant. 32: 16-42 (2015) - [c9]Eleni Mina, Mark Thompson, Kristina M. Hettne, Willeke M. C. van Roon-Mom, Rajaram Kaliyaperumal, Eelke van der Horst, Katherine Wolstencroft, Barend Mons, Marco Roos:
Multidisciplinary Collaboration to Facilitate Hypotheses Generation in Huntington's Disease. e-Science 2015: 118-125 - [c8]Eelke van der Horst, Rajaram Kaliyaperumal, Zuotian Tatum, Mark Thompson, Erik A. Schultes, Eleni Mina, Ivo Fokkema, Johan T. den Dunnen, Marco Roos, Jeroen F. J. Laros, Barend Mons, Kristina M. Hettne, Peter A. C. 't Hoen:
Finding Novel Associations Across Domains Using Linked Data: a Case Study on Genetic Variants Disrupting Transcription Start Sites. SWAT4LS 2015: 2-12 - 2014
- [j7]Kristina M. Hettne, Harish Dharuri, Jun Zhao, Katherine Wolstencroft, Khalid Belhajjame, Stian Soiland-Reyes, Eleni Mina, Mark Thompson, Don Cruickshank, Lourdes Verdes-Montenegro, Julián Garrido, David De Roure, Óscar Corcho, Graham Klyne, Reinout van Schouwen, Peter A. C. 't Hoen, Sean Bechhofer, Carole A. Goble, Marco Roos:
Structuring research methods and data with the research object model: genomics workflows as a case study. J. Biomed. Semant. 5: 41 (2014) - [i3]Khalid Belhajjame, Jun Zhao, Daniel Garijo, Kristina M. Hettne, Raúl Palma, Óscar Corcho, José Manuél Gómez-Pérez, Sean Bechhofer, Graham Klyne, Carole A. Goble:
The Research Object Suite of Ontologies: Sharing and Exchanging Research Data and Methods on the Open Web. CoRR abs/1401.4307 (2014) - [i2]Kristina M. Hettne, Reinout van Schouwen, Eleni Mina, Eelke van der Horst, Mark Thompson, Rajaram Kaliyaperumal, Barend Mons, Erik M. van Mulligen, Jan A. Kors, Marco Roos:
Explain your data by Concept Profile Analysis Web Services. F1000Research 3: 173 (2014) - 2013
- [c7]Eelke van der Horst, Marco Roos, Kristina M. Hettne:
Workflows and Services for Concept Profile Generation. SWAT4LS 2013 - [c6]Eleni Mina, Mark Thompson, Rajaram Kaliyaperumal, Jun Zhao, Kristina M. Hettne, Erik A. Schultes, Marco Roos:
Nanopublications for Exposing Experimental Data in the Life-sciences: A Huntington's Disease Case Study. SWAT4LS 2013 - [i1]Kristina M. Hettne, Harish Dharuri, Jun Zhao, Katherine Wolstencroft, Khalid Belhajjame, Stian Soiland-Reyes, Eleni Mina, Mark Thompson, Don Cruickshank, Lourdes Verdes-Montenegro, Julián Garrido, David De Roure, Óscar Corcho, Graham Klyne, Reinout van Schouwen, Peter A. C. 't Hoen, Sean Bechhofer, Carole A. Goble, Marco Roos:
Structuring research methods and data with the Research Object model: genomics workflows as a case study. CoRR abs/1311.2789 (2013) - 2012
- [c5]Jun Zhao, José Manuél Gómez-Pérez, Khalid Belhajjame, Graham Klyne, Esteban García-Cuesta, Aleix Garrido, Kristina M. Hettne, Marco Roos, David De Roure, Carole A. Goble:
Why workflows break - Understanding and combating decay in Taverna workflows. eScience 2012: 1-9 - [c4]Jun Zhao, Graham Klyne, Piotr Holubowicz, Raúl Palma, Stian Soiland-Reyes, Kristina M. Hettne, José Enrique Ruiz, Marco Roos, Kevin R. Page, José Manuél Gómez-Pérez, David De Roure, Carole A. Goble:
RO-Manager: A Tool for Creating and Manipulating Research Objects to Support Reproducibility and Reuse in Sciences. LISC@ISWC 2012 - [c3]Kristina M. Hettne, Katherine Wolstencroft, Khalid Belhajjame, Carole A. Goble, Eleni Mina, Harish Dharuri, David De Roure, Lourdes Verdes-Montenegro, Julián Garrido, Marco Roos:
Best Practices for Workflow Design: How to Prevent Workflow Decay. SWAT4LS 2012 - 2011
- [j6]Rob Jelier, Jelle J. Goeman, Kristina M. Hettne, Martijn J. Schuemie, Johan T. den Dunnen, Peter A. C. 't Hoen:
Literature-aided interpretation of gene expression data with the weighted global test. Briefings Bioinform. 12(5): 518-529 (2011) - [c2]David De Roure, Carole A. Goble, Graham Klyne, Marco Roos, Kristina M. Hettne, José Enrique Ruiz, Raúl Palma, José Manuél Gómez-Pérez, Paolo Missier, Khalid Belhajjame:
Towards the Preservation of Scientific Workflows. iPRES 2011 - [c1]Kristina M. Hettne, Stian Soiland-Reyes, Graham Klyne, Khalid Belhajjame, Matthew Gamble, Sean Bechhofer, Marco Roos, Óscar Corcho:
Workflow forever: semantic web semantic models and tools for preserving and digitally publishing computational experiments. SWAT4LS 2011: 36-37 - 2010
- [j5]Kristina M. Hettne, Erik M. van Mulligen, Martijn J. Schuemie, Bob J. A. Schijvenaars, Jan A. Kors:
Rewriting and suppressing UMLS terms for improved biomedical term identification. J. Biomed. Semant. 1: 5 (2010) - [j4]Kristina M. Hettne, Antony J. Williams, Erik M. van Mulligen, Jos Kleinjans, Valery Tkachenko, Jan A. Kors:
Automatic vs. manual curation of a multi-source chemical dictionary: the impact on text mining. J. Cheminformatics 2: 3 (2010) - [j3]Kristina M. Hettne, Antony J. Williams, Erik M. van Mulligen, Jos Kleinjans, Valery Tkachenko, Jan A. Kors:
Automatic vs. manual curation of a multi-source chemical dictionary: the impact on text mining (Correction). J. Cheminformatics 2: 4 (2010)
2000 – 2009
- 2009
- [j2]Kristina M. Hettne, Rob H. Stierum, Martijn J. Schuemie, Peter J. M. Hendriksen, Bob J. A. Schijvenaars, Erik M. van Mulligen, Jos Kleinjans, Jan A. Kors:
A dictionary to identify small molecules and drugs in free text. Bioinform. 25(22): 2983-2991 (2009) - 2008
- [j1]Erik M. van Mulligen, Montserrat Cases, Kristina M. Hettne, Eva Molero, Marc Weeber, Kevin A. Robertson, Baldomero Oliva, Guillermo de la Calle, Victor Maojo:
Model Formulation: Training Multidisciplinary Biomedical Informatics Students: Three Years of Experience. J. Am. Medical Informatics Assoc. 15(2): 246-254 (2008)
Coauthor Index
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