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2020 – today
- 2024
[j11]Haoran Niu
, Olufemi A. Omitaomu, Michael A. Langston, Mohammed M. Olama, Özgür Özmen, Hilda B. Klasky, Angela Laurio, Merry Ward, Jonathan R. Nebeker:
EHR-BERT: A BERT-based model for effective anomaly detection in electronic health records. J. Biomed. Informatics 150: 104605 (2024)- [j10]Everett Neil Rush, Ozgur Ozmen, Minsu Kim, Erin Rush Ortegon, Makoto Jones, Byung H. Park, Steven Pizer, Jodie Trafton, Lisa A. Brenner, Merry Ward, Jonathan R. Nebeker:
A framework for inferring and analyzing pharmacotherapy treatment patterns. BMC Medical Informatics Decis. Mak. 24(1): 68 (2024) - 2023
- [c40]Hilda B. Klasky, Özgür Özmen, Olufemi A. Omitaomu, Mohammed M. Olama, Merry Ward, Angela Laurio, Jonathan R. Nebeker:
Towards a Comparative Assessment of Data-Driven Process Models in Health Information Technology. ICHI 2023: 338-343 - [c39]Junghoon Chae, Byung H. Park, Minsu Kim, Everett Neil Rush, Özgür Özmen, Makoto Jones, Merry Ward, Jonathan R. Nebeker:
CPViz: Visualizing clinical pathways represented in higher-order networks. Visualization and Data Analysis 2023: 1-8 - 2022
- [j9]Haoran Niu, Olufemi A. Omitaomu, Michael A. Langston, Mohammed M. Olama, Özgür Özmen, Hilda B. Klasky, Angela Laurio, Brian C. Sauer, Merry Ward, Jonathan R. Nebeker:
Detecting anomalous sequences in electronic health records using higher-order tensor networks. J. Biomed. Informatics 135: 104219 (2022) - [c38]Sandra Mitchell, Gay Stahr, Todd Turner, Jeffery Anderson, Jonathan R. Nebeker:
Collaborative High Reliability Organization (HRO) Initiative in the Veterans Health Information Exchange (VHIE) Program. AMIA 2022 - [c37]Skyler Resendez, Hugo Sebastian Ruiz Ayala, Wilmon McCray, Steven H. Brown, Jonathan R. Nebeker, Diane Montella, Peter L. Elkin:
Defining Long-Covid Profiles for Future Diagnoses Through Extensive Analysis of VA Covid-19 Data. AMIA 2022 - [c36]Byung H. Park, Sangkeun Lee, Özgür Özmen, Mohit Kumar, Merry Ward, Jonathan R. Nebeker:
Real-time Multi-granular Analytics Framework for HIT Systems. IEEE Big Data 2022: 3441-3446 - [c35]Melissa P. Resnick, Diane Montella, Wilmon McCray, Steven H. Brown, Keith E. Campbell, Jonathan R. Nebeker, Frank LeHouillier, Peter L. Elkin:
The Gaps in the Terminological Representation of the ACORN Social Determinants of Health Survey. ICBO 2022: 1-10 - [c34]Laura Pullum, Olufemi A. Omitaomu, Mohammed M. Olama, Addi Thakur Malviya, Ozgur Ozmer, Hilda B. Klasky, P. Teja Kuruganti, Merry Ward, Jeanie M. Scott, Angela Laurio, Brian C. Sauer, Frank Drews, Jonathan R. Nebeker:
A Systematic Review of Healthcare Information Technology Anomaly Classification. ICHI 2022: 393-400 - [c33]Özgür Özmen, Hilda B. Klasky, Olufemi A. Omitaomu, Mohammed M. Olama, P. Teja Kuruganti, Laura Pullum, Addi Thakur Malviya, Merry Ward, Jeanie M. Scott, Angela Laurio, Brian C. Sauer, Frank Drews, Jonathan R. Nebeker:
Use of Event-Time Embeddings via RNN to Discern Novel Event Sequences in EHRs. ICHI 2022: 639-643 - [c32]Zackary Falls, Steven H. Brown, Naveed Shah, Frank LeHouillier, Randeep Badwal, Kendria Hall, Gillian Franklin, William H. Kelly, Andrew Holdaway, Diane Montella, Linda Wedemeyer, Sarita Keni, Eric Rose, Jonathan R. Nebeker, Peter L. Elkin:
CDS-Compare: A Web Application for Machine Learning Assisted Curation of Clinical Order Sets. MIE 2022: 465-469 - 2021
- [j8]Mark S. Pfaff, Ozgur Eris, Charlene R. Weir, Amanda Anganes, Tina Crotty, Mohammad Rahman, Merry Ward, Jonathan R. Nebeker:
Analysis of the cognitive demands of electronic health record use. J. Biomed. Informatics 113: 103633 (2021) - [j7]Olufemi A. Omitaomu, Hilda B. Klasky, Mohammed M. Olama, Özgür Özmen, Laura Pullum, Addi Thakur Malviya, P. Teja Kuruganti, Jeanie M. Scott, Angela Laurio, Frank Drews, Brian C. Sauer, Merry Ward, Jonathan R. Nebeker:
A new methodological framework for hazard detection models in health information technology systems. J. Biomed. Informatics 124: 103937 (2021) - [c31]S. M. Shamimul Hasan, Minsu Kim, Byung H. Park, Makoto M. Jones, Merry Ward, Jonathan R. Nebeker:
A Knowledge Network-Based Approach to Facilitate Annotation of Clinical Pathway Component Clusters. BHI 2021: 1-4 - 2020
- [c30]Haoran Niu, Olufemi A. Omitaomu, Qing C. Cao, Mohammed M. Olama, Özgür Özmen, Hilda B. Klasky, Laura Pullum, Addi Thakur Malviya, P. Teja Kuruganti, Jeanie M. Scott, Angela Laurio, Frank Drews, Brian C. Sauer, Merry Ward, Jonathan R. Nebeker:
Adaptive Anomaly Detection for Dynamic Clinical Event Sequences. IEEE BigData 2020: 4919-4928 - [c29]Everett Neil Rush, Özgür Özmen, Kathryn Knight, Byung H. Park, Clifton Baker, Makoto Jones, Merry Ward, Jonathan R. Nebeker:
Characterizing Sub-Cohorts via Data Normalization and Representation Learning. CBMS 2020: 173-176 - [c28]Junghoon Chae, Byung H. Park, Makoto Jones, Merry Ward, Jonathan R. Nebeker:
Converting Clinical Pathways to BPM+ Standards: A Case Study in Stable Ischemic Heart Disease. CBMS 2020: 453-456
2010 – 2019
- 2019
- [c27]Steven H. Brown, Loren Stevenson, Daniel Territo, Jonathan R. Nebeker, Michael J. Lincoln, John Kilbourne, Holly Miller:
One-Way and Round-Trip Analysis Demonstrates Surprising Limitations of Standards-Based Terminology Maps. AMIA 2019 - [c26]Özgür Özmen, Hilda B. Klasky, Olufemi A. Omitaomu, Mohammed M. Olama, P. Teja Kuruganti, Laura Pullum, Merry Ward, Jeanie M. Scott, Angela Laurio, Jonathan R. Nebeker:
Topic Modeling to Discern Irregular Order Patterns in Unlabeled Electronic Health Records. BHI 2019: 1-4 - [c25]Scott L. DuVall, Michael E. Matheny, Ildar R. Ibragimov, Trey D. Oats, Jay N. Tucker, Brett R. South, Augie Turano, Hamid Saoudian, Casey Kangas, Keith D. Hofmann, Wendy Funk, Chris Nichols, Albert Bonnema, Louis Ferrucci, Jonathan R. Nebeker:
A Tale of Two Databases: The DoD and VA Infrastructure for Clinical Intelligence (DaVINCI). MedInfo 2019: 1660-1661 - 2018
- [c24]Omar Bouhaddou, Nelson Hsing, Nitin Jain, Jim Malpass, Margaret Donahue, Jonathan R. Nebeker:
On-Demand Health Information Exchange Strategy: Estimating the Amount of Duplicate Documents Sent and Received. AMIA 2018 - [c23]John D. D'Amore, Omar Bouhaddou, Sandra Mitchell, Chun Li, Russell Leftwich, Todd Turner, Matthew Rahn, Margaret Donahue, Jonathan R. Nebeker:
Interoperability Progress and Remaining Data Quality Barriers of Certified Health Information Technologies. AMIA 2018 - [c22]Margaret Donahue, Omar Bouhaddou, Nelson Hsing, Todd Turner, Glen Crandall, Joseph R. Nelson, Jonathan R. Nebeker:
Veterans Health Information Exchange: Successes and Challenges of Nationwide Interoperability. AMIA 2018 - [c21]Scott L. DuVall, Michael E. Matheny, Ildar R. Ibragimov, Trey D. Oats, Jay N. Tucker, Brett R. South, Augie Turano, Hamid Saoudian, Casey Kangas, Keith D. Hofmann, Wendy Funk, Chris Nichols, Albert Bonnema, Louis Ferrucci, Jonathan R. Nebeker:
The Department of Defense (DoD) and Department of Veterans Affairs (VA) Infrastructure for Clinical Intelligence (DaVINCI). AMIA 2018 - 2017
- [j6]Kenneth S. Boockvar, William Ho, Jennifer Pruskowski, Katherine E. DiPalo, Jane J. Wong, Jessica Patel, Jonathan R. Nebeker, Rainu Kaushal, William Hung:
Effect of health information exchange on recognition of medication discrepancies is interrupted when data charges are introduced: results of a cluster-randomized controlled trial. J. Am. Medical Informatics Assoc. 24(6): 1095-1101 (2017) - 2016
- [c20]Omar Bouhaddou, Mike Davis, Margaret Donahue, Anthony Mallia, Stephania Griffin, Jennifer Teal, Jonathan R. Nebeker:
Automated Detection of Privacy Sensitive Conditions in C-CDAs: Security Labeling Services at the Department of Veterans Affairs. AMIA 2016 - [c19]Jonathan R. Nebeker, Shane McNamee, David Douglas, James L. Hellewell, Kristian Johnson, Jessica Murphy, Ron Moody, Charlene R. Weir:
VA's New Electronic Health Management Platform (eHMP): Novel Features for Activity Management and Notifications. AMIA 2016 - 2015
- [j5]Adi V. Gundlapalli, Doug Redd, Bryan Smith Gibson, Marjorie Carter, Chris Korhonen, Jonathan R. Nebeker, Matthew H. Samore, Qing Zeng-Treitler:
Maximizing clinical cohort size using free text queries. Comput. Biol. Medicine 60: 1-7 (2015) - [c18]Fern FitzHenry, Jesse Brannen, Jason N. Denton, Jonathan R. Nebeker, Scott L. DuVall, Freneka F. Minter, Jeffrey Scehnet, Brian C. Sauer, Lucila Ohno-Machado, Michael E. Matheny:
Transforming the National Department of Veterans Affairs Data Warehouse to the OMOP Common Data Model. AMIA 2015 - [c17]Jonathan R. Nebeker, Walter P. Nichol, Shane McNamee, Jessica Murphy, James L. Hellewell, Reese Omizo, Kristian Johnson, Margaret V. McDonald, Kensaku Kawamoto, Guilherme Del Fiol, Emory Fry, Elaine Hunolt, Theresa Cullen, Scott D. Wood, Jennifer Herout, Charlene R. Weir:
Electronic Health Management Platform (eHMP): The Next Phase of VA's EHR. AMIA 2015 - [c16]Mark S. Pfaff, Ozgur Eris, Amanda Anganes, Tina Crotty, Jonathan R. Nebeker, Merry Ward:
Uncovering the Cognitive Demands of EHR Use via Task Analysis. AMIA 2015 - 2014
- [j4]Lucila Ohno-Machado, Zia Agha, Douglas S. Bell, Lisa Dahm, Michele E. Day, Jason N. Doctor, Davera Gabriel, Maninder K. Kahlon, Katherine K. Kim, Michael A. Hogarth, Michael E. Matheny, Daniella Meeker, Jonathan R. Nebeker:
Brief communication: pSCANNER: patient-centered Scalable National Network for Effectiveness Research. J. Am. Medical Informatics Assoc. 21(4): 621-626 (2014) - [c15]Guy Divita, Qing T. Zeng, Adi V. Gundlapalli, Scott L. DuVall, Jonathan R. Nebeker, Matthew H. Samore:
Sophia: An Expedient UMLS Concept Extraction Annotator. AMIA 2014 - [c14]Charlene R. Weir, Bryan Smith Gibson, Alan H. Morris, Jorie Butler, Matthew H. Samore, Jonathan R. Nebeker:
Considerations of Dual Process Theories for EHR Design. AMIA 2014 - 2013
- [c13]Leslie Lenert, Farrant Sakaguchi, Robert Dunlea, Kurt Barsch, Jonathan R. Nebeker, Caroline Milne:
Effects of Electronic Health Records Systems on the Exam-Room Communication Skills of Resident Physicians. AMIA 2013 - [c12]Jonathan R. Nebeker, Charlene R. Weir, James L. Hellewell, Molly Leecaster, Frank Drews, Robyn Barrus, Daniel Bolton, Gopi Penmetsa, Amelia E. Underwood:
Integrating Information Objects and Annotations in the Notional DoD-VA iEHR User Experience: Results from a randomized controlled trial on efficiency and accuracy of problem assessment and intervention specification. AMIA 2013 - [c11]Charlene R. Weir, Frank Drews, Jorie Butler, Makoto L. Jones, Robyn Barrus, Jonathan R. Nebeker:
Support For Contextual Control In Primary Care: A Qualitative Analysis. AMIA 2013 - [c10]Doug Redd, Thomas C. Rindflesch, Jonathan R. Nebeker, Qing Zeng-Treitler:
Improve Retrieval Performance on Clinical Notes: A Comparison of Four Methods. HICSS 2013: 2389-2397 - 2012
- [c9]Tyler Forbush, Brad Adams, Shuying Shen, Brett R. South, Jonathan R. Nebeker, Scott L. DuVall:
CASPR: Friendly Annotation Management. AMIA 2012 - [c8]Charlene R. Weir, Frank Drews, Molly Leecaster, Robyn Barrus, Jonathan R. Nebeker:
The Orderly and Effective Visit: Impact of the Electronic Health Record on Modes of Cognitive Control. AMIA 2012 - [c7]Qing T. Zeng, Doug Redd, Thomas C. Rindflesch, Jonathan R. Nebeker:
Synonym, Topic Model and Predicate-Based Query Expansion for Retrieving Clinical Documents. AMIA 2012 - 2011
- [j3]Christopher H. O. Olola, Scott P. Narus, Jonathan R. Nebeker, Mollie R. Poynton, Joseph Hales, Belle Rowan, Heather LeSieur, Cynthia Zumbrennen, Annemarie A. Edwards, Robert Crawford, Spencer Amundsen, Yasmin Kabir, Joseph Atkin, Cynthia Newberry, Jason Young, Tariq Hanifi, Ben Risenmay, Tyler Sorensen, R. Scott Evans:
The perception of medical professionals and medical students on the usefulness of an emergency medical card and a continuity of care report in enhancing continuity of care. Int. J. Medical Informatics 80(6): 412-420 (2011) - [c6]Scott L. DuVall, Keith W. Boone, Adi V. Gundlapalli, Brett R. South, Shuying Shen, Jonathan R. Nebeker, Leonard W. D'Avolio, Matthew H. Samore:
Creating Reusable Annotated Corpora with the Clinical Document Architecture. HICSS 2011: 1-10 - [c5]André Kushniruk, Susan L. Santos, George Pourakis, Jonathan R. Nebeker, Kenneth S. Boockvar:
Cognitive Analysis of a Medication Reconciliation Tool: Applying Laboratory and Naturalistic Approaches to System Evaluation. ITCH 2011: 203-207
2000 – 2009
- 2008
- [c4]Hillary J. Mull, Jonathan R. Nebeker:
Informatics Tools for the Development of Action-Oriented Triggers for Outpatient Adverse Drug Events. AMIA 2008 - 2007
- [j2]Charlene R. Weir, Jonathan R. Nebeker, Bret L. Hicken, Rebecca Campo, Frank Drews, Beth LeBar:
Research Paper: A Cognitive Task Analysis of Information Management Strategies in a Computerized Provider Order Entry Environment. J. Am. Medical Informatics Assoc. 14(1): 65-75 (2007) - [c3]Charlene R. Weir, Jonathan R. Nebeker:
Critical Issues in an Electronic Documentation System. AMIA 2007 - 2003
- [c2]John F. Hurdle, Charlene R. Weir, Beverly Roth, Jennifer M. Hoffman, Jonathan R. Nebeker:
Critical Gaps in the World's Largest Electronic Medical Record: Ad Hoc Nursing Narratives and Invisible Adverse Drug Events. AMIA 2003 - 2002
- [j1]Jonathan R. Nebeker, John F. Hurdle, Jennifer M. Hoffman, Beverly Roth, Charlene R. Weir, Matthew H. Samore:
Developing a Taxonomy for Research in Adverse Drug Events: Potholes and Signposts. J. Am. Medical Informatics Assoc. 9(Supplement): 80-85 (2002) - 2001
- [c1]Jonathan R. Nebeker, John F. Hurdle, Jennifer M. Hoffman, Beverly Roth, Charlene R. Weir, Matthew H. Samore:
Developing a taxonomy for research in adverse drug events: potholes and signposts. AMIA 2001
Coauthor Index
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