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ORCIDKutlu Ö. Ülgen
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- affiliation: Bogazici University, Istanbul, Turkey
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2020 – today
- 2023
[j13]Enes Fahri Tezcan
, Yigit Demirtas, Zeynep Petek Cakar, Kutlu Ö. Ülgen:
Comprehensive genome-scale metabolic model of the human pathogen Cryptococcus neoformans: A platform for understanding pathogen metabolism and identifying new drug targets. Frontiers Bioinform. 3 (2023)- 2022
- [i1]Gökçe Uludogan, Elif Özkirimli, Kutlu Ö. Ülgen, Nilgün Karali, Arzucan Özgür:
Exploiting Pretrained Biochemical Language Models for Targeted Drug Design. CoRR abs/2209.00981 (2022) - 2020
- [c1]Merve Gorkem Durmaz, Abdurrahman Dilmac, Berk Camli, Elif Gencturk, Zeliha Cansu Canbek Ozdil, Ali Emre Pusane, Arda Deniz Yalcinkaya, Kutlu Ö. Ülgen, Tuna Tugcu:
Preliminary Studies on Flow Assisted Propagation of Fluorescent Microbeads in Microfluidic Channels for Molecular Communication Systems. BICT 2020: 294-302
2010 – 2019
- 2017
- [j12]Ozge Bayraktar, Elif Özkirimli Ölmez, Kutlu Ö. Ülgen:
Sphingosine kinase 1 (SK1) allosteric inhibitors that target the dimerization site. Comput. Biol. Chem. 69: 64-76 (2017) - 2015
- [j11]Utku Deniz, Kutlu Ö. Ülgen, Elif Özkirimli Ölmez:
Identification of potential Tpx inhibitors against pathogen-host interactions. Comput. Biol. Chem. 58: 126-138 (2015) - 2014
- [j10]Oya Gursoy Yilmaz, Elif Özkirimli Ölmez, Kutlu Ö. Ülgen:
Targeting the Akt1 allosteric site to identify novel scaffolds through virtual screening. Comput. Biol. Chem. 48: 1-13 (2014) - 2013
- [j9]Saliha Durmus Tekir, Tunahan Çakir, Emre Ardiç, Ali Semih Sayilirbas, Gökhan Konuk, Mithat Konuk, Hasret Sariyer, Azat Ugurlu, Ilknur Karadeniz, Arzucan Özgür, Fatih Erdogan Sevilgen, Kutlu Ö. Ülgen:
PHISTO: pathogen-host interaction search tool. Bioinform. 29(10): 1357-1358 (2013) - 2011
- [j8]Fatma Betül Kavun Özbayraktar, Kutlu Ö. Ülgen:
Stoichiometric network reconstruction and analysis of yeast sphingolipid metabolism incorporating different states of hydroxylation. Biosyst. 104(1): 63-75 (2011) - [j7]Aysun Eren Toku, Saliha Durmus Tekir, Fatma Betül Kavun Özbayraktar, Kutlu Ö. Ülgen:
Reconstruction and crosstalk of protein-protein interaction networks of Wnt and Hedgehog signaling in Drosophila melanogaster. Comput. Biol. Chem. 35(5): 282-292 (2011) - 2010
- [j6]Fatma Betül Kavun Özbayraktar, Kutlu Ö. Ülgen:
Drug target identification in sphingolipid metabolism by computational systems biology tools: Metabolic control analysis and metabolic pathway analysis. J. Biomed. Informatics 43(4): 537-549 (2010)
2000 – 2009
- 2009
- [j5]Saliha Durmus Tekir, Kazim Yalçin Arga, Kutlu Ö. Ülgen:
Drug targets for tumorigenesis: Insights from structural analysis of EGFR signaling network. J. Biomed. Informatics 42(2): 228-236 (2009) - 2007
- [j4]Tunahan Çakir, Betül Kirdar, Z. Ilsen Önsan, Kutlu Ö. Ülgen, Jens Nielsen:
Effect of carbon source perturbations on transcriptional regulation of metabolic fluxes in Saccharomyces cerevisiae. BMC Syst. Biol. 1: 18 (2007) - 2006
- [j3]Pinar Pir, Betül Kirdar, Andrew Hayes, Z. Ilsen Önsan, Kutlu Ö. Ülgen, Stephen G. Oliver:
Integrative investigation of metabolic and transcriptomic data. BMC Bioinform. 7: 203 (2006) - [j2]Saliha Durmus Tekir, Tunahan Çakir, Kutlu Ö. Ülgen:
Analysis of enzymopathies in the human red blood cells by constraint-based stoichiometric modeling approaches. Comput. Biol. Chem. 30(5): 327-338 (2006) - 2005
- [j1]S. Tiveci, Ata Akin, Tunahan Çakir, H. Saybasili, Kutlu Ö. Ülgen:
Modelling of calcium dynamics in brain energy metabolism and Alzheimer's disease. Comput. Biol. Chem. 29(2): 151-162 (2005)
Coauthor Index
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