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Journal Articles
- 2023
- [j12]Robert J. Millikin, Kalpana Raja, John W. Steill, Cannon Lock, Xuancheng Tu, Ian Ross, Lam C. Tsoi, Finn Kuusisto, Zijian Ni, Miron Livny, Brian Bockelman, James A. Thomson, Ron M. Stewart:
Serial KinderMiner (SKiM) discovers and annotates biomedical knowledge using co-occurrence and transformer models. BMC Bioinform. 24(1): 412 (2023) - [j11]Md. Arifuzzaman, Brian Bockelman, Jim Basney, Engin Arslan:
Falcon: Fair and Efficient Online File Transfer Optimization. IEEE Trans. Parallel Distributed Syst. 34(8): 2265-2278 (2023) - 2022
- [j10]Deepak Nadig, Byrav Ramamurthy, Brian Bockelman:
SNAG: SDN-Managed Network Architecture for GridFTP Transfers Using Application-Awareness. IEEE/ACM Trans. Netw. 30(4): 1585-1598 (2022) - 2021
- [j9]Mohammad Alhowaidi, Deepak Nadig, Boyang Hu, Byrav Ramamurthy, Brian Bockelman:
Cache management for large data transfers and multipath forwarding strategies in Named Data Networking. Comput. Networks 199: 108437 (2021) - [j8]Brian Bockelman, Miron Livny, Brian Lin, Francesco Prelz:
Principles, technologies, and time: The translational journey of the HTCondor-CE. J. Comput. Sci. 52: 101213 (2021) - [j7]Edgar Fajardo Hernandez, Frank Würthwein, Brian Bockelman, Miron Livny, Greg Thain, James Alexander Clark, Peter Couvares, Josh Willis:
Adapting LIGO workflows to run in the Open Science Grid. SoftwareX 14: 100679 (2021) - 2020
- [j6]Mohammad Alhowaidi, Byrav Ramamurthy, Brian Bockelman, David Swanson:
Enhancing the SDTMA-NDN architecture for transferring the scientific data software using named data networking. Comput. Networks 166 (2020) - 2019
- [j5]Martin Barisits, Thomas Beermann, Frank Berghaus, Brian Bockelman, Joaquin Bogado, David Cameron, Dimitrios Christidis, Diego Ciangottini, Gancho Dimitrov, Markus Elsing, Vincent Garonne, Alessandro Di Girolamo, Luc Goossens, Wen Guan, Jaroslav Guenther, Tomas Javurek, Dietmar Kuhn, Mario Lassnig, Fernando Lopez, Nicolò Magini, Angelos Molfetas, Armin Nairz, Farid Ould-Saada, Stefan Prenner, Cedric Serfon, Graeme A. Stewart, Eric Vaandering, Petya Vasileva, Ralph Vigne, Tobias Wegner:
Rucio: Scientific Data Management. Comput. Softw. Big Sci. 3(1) (2019) - 2017
- [j4]Burt Holzman, Lothar Bauerdick, Brian Bockelman, Dave Dykstra, Ian Fisk, Stuart Fuess, Gabriele Garzoglio, Maria Girone, Oliver Gutsche, Dirk Hufnagel, Hyunwoo Kim, Robert Kennedy, Nicolò Magini, David Mason, Panagiotis Spentzouris, Anthony Tiradani, Steven Timm, Eric Wayne Vaandering:
HEPCloud, a New Paradigm for HEP Facilities: CMS Amazon Web Services Investigation. Comput. Softw. Big Sci. 1(1) (2017) - [j3]Zhe Zhang, Brian Bockelman, Dale W. Carder, Todd Tannenbaum:
Lark: An effective approach for software-defined networking in high throughput computing clusters. Future Gener. Comput. Syst. 72: 105-117 (2017) - 2011
- [j2]Mine Altunay, Paul Avery, Kent Blackburn, Brian Bockelman, Michael Ernst, Dan Fraser, Robert Quick, Robert W. Gardner, Sebastien Goasguen, Tanya Levshina, Miron Livny, John McGee, Doug Olson, Ruth Pordes, Maxim Potekhin, Abhishek Rana, Alain Roy, Chander Sehgal, Igor Sfiligoi, Frank Würthwein:
A Science Driven Production Cyberinfrastructure - the Open Science Grid. J. Grid Comput. 9(2): 201-218 (2011) - 2005
- [j1]Brian Bockelman, Bo Deng:
Food Web Chaos without Subchain oscillators. Int. J. Bifurc. Chaos 15(11): 3481-3492 (2005)
Conference and Workshop Papers
- 2022
- [c21]Brian Aydemir, Jim Basney, Brian Bockelman, Jeff Gaynor, Derek Weitzel:
SciAuth: A Lightweight End-to-End Capability-Based Authorization Environment for Scientific Computing. PEARC 2022: 45:1-45:5 - 2021
- [c20]Derek Weitzel, Shawn McKee, Brian Paul Bockelman, John Thiltges, Marian Babik, Ilija Vukotic:
The Service Analysis and Network Diagnosis Data Pipeline. INDIS@SC 2021: 1-11 - 2020
- [c19]Zhe Zhang, Brian Bockelman, Derek Weitzel, Xinkai Zhang, Hamid Vakilzadian, David Swanson:
Trua: Efficient Task Replication for Flexible User-defined Availability in Scientific Grids. CCGRID 2020: 360-369 - [c18]Zhe Zhang, Brian Bockelman, Derek Weitzel, David Swanson:
Exploring Erasure Coding Techniques for High Availability of Intermediate Data. CCGRID 2020: 865-872 - 2019
- [c17]Deepak Nadig, Byrav Ramamurthy, Brian Bockelman, David Swanson:
APRIL: An Application-Aware, Predictive and Intelligent Load Balancing Solution for Data-Intensive Science. INFOCOM 2019: 1909-1917 - [c16]Derek Weitzel, Marián Zvada, Ilija Vukotic, Robert W. Gardner, Brian Bockelman, Mats Rynge, Edgar Fajardo Hernandez, Brian Lin, Mátyás Selmeci:
StashCache: A Distributed Caching Federation for the Open Science Grid. PEARC 2019: 58:1-58:7 - [c15]Alex Withers, Brian Bockelman, Derek Weitzel, Duncan A. Brown, Jason Patton, Jeff Gaynor, Jim Basney, Todd Tannenbaum, You Alex Gao, Zach Miller:
SciTokens: Demonstrating Capability-Based Access to Remote Scientific Data using HTCondor. PEARC 2019: 118:1-118:4 - 2018
- [c14]Mohammad Alhowaidi, Deepak Nadig Anantha, Byrav Ramamurthy, Brian Bockelman, David Swanson:
Multipath Forwarding Strategies and SDN Control for Named Data Networking. ANTS 2018: 1-6 - [c13]Deepak Nadig, Byrav Ramamurthy, Brian Bockelman, David Swanson:
Large Data Transfer Predictability and Forecasting using Application-Aware SDN. ANTS 2018: 1-6 - [c12]Deepak Nadig Anantha, Byrav Ramamurthy, Brian Bockelman, David Swanson:
Identifying Anomalies in GridFTP transfers for Data-Intensive Science through Application-Awareness. SDN-NFV@CODASPY 2018: 7-12 - [c11]Deepak Nadig Anantha, Byrav Ramamurthy, Brian Bockelman, David Swanson:
Optimized Service Chain Mapping and reduced flow processing with Application-Awareness. NetSoft 2018: 303-307 - [c10]Alex Withers, Brian Bockelman, Derek Weitzel, Duncan A. Brown, Jeff Gaynor, Jim Basney, Todd Tannenbaum, Zach Miller:
SciTokens: Capability-Based Secure Access to Remote Scientific Data. PEARC 2018: 24:1-24:8 - [c9]Zhe Zhang, Brian Bockelman, Derek Weitzel, David Swanson:
Discovering Job Preemptions in the Open Science Grid. PEARC 2018: 59:1-59:8 - 2017
- [c8]Mohammad Alhowaidi, Byrav Ramamurthy, Brian Bockelman, David Swanson:
SDTMA-NDN: Scientific data transfer management architecture using named data networking. ANTS 2017: 1-6 - [c7]Deepak Nadig Anantha, Byrav Ramamurthy, Brian Bockelman, David Swanson:
Differentiated network services for data-intensive science using application-aware SDN. ANTS 2017: 1-6 - [c6]Jim Pivarski, Peter Elmer, Brian Bockelman, Zhe Zhang:
Fast access to columnar, hierarchically nested data via code transformation. IEEE BigData 2017: 253-262 - [c5]Mohammad Alhowaidi, Byrav Ramamurthy, Brian Bockelman, David Swanson:
The Case for Using Content-Centric Networking for Distributing High-Energy Physics Software. ICDCS 2017: 2571-2572 - [c4]Derek Weitzel, Brian Bockelman, Duncan A. Brown, Peter Couvares, Frank Würthwein, Edgar Fajardo Hernandez:
Data Access for LIGO on the OSG. PEARC 2017: 24:1-24:6 - 2015
- [c3]Kenneth Bloom, Tommaso Boccali, Brian Bockelman, Daniel C. Bradley, Sridhara Dasu, Jeff Dost, Federica Fanzago, Igor Sfiligoi, Alja Mrak Tadel, Matevz Tadel, Carl Vuosalo, Frank Würthwein, Avi Yagil, Marián Zvada:
Any Data, Any Time, Anywhere: Global Data Access for Science. BDC 2015: 85-91 - [c2]Zhe Zhang, Brian Bockelman, Dale W. Carder, Todd Tannenbaum:
Lark: Bringing Network Awareness to High Throughput Computing. CCGRID 2015: 382-391 - 2013
- [c1]Rick Wagner, Mahidhar Tatineni, Eva Hocks, Kenneth Yoshimoto, Scott Sakai, Michael L. Norman, Brian Bockelman, Igor Sfiligoi, Matevz Tadel, James Letts, Frank Würthwein, Lothar Bauerdick:
Using Gordon to accelerate LHC science. XSEDE 2013: 59:1-59:4
Informal and Other Publications
- 2024
- [i35]Fabio Andrijauskas, Igor Sfiligoi, Diego Davila, Aashay Arora, Jonathan Guiang, Brian Bockelman, Greg Thain, Frank Würthwein:
CRIU - Checkpoint Restore in Userspace for computational simulations and scientific applications. CoRR abs/2402.05244 (2024) - 2023
- [i34]Sam Albin, Garhan Attebury, Kenneth Bloom, Brian Bockelman, Carl Lundstedt, Oksana Shadura, John Thiltges:
Coffea-Casa: Building composable analysis facilities for the HL-LHC. CoRR abs/2312.11485 (2023) - 2022
- [i33]Maria Acosta Flechas, Garhan Attebury, Kenneth Bloom, Brian Bockelman, Lindsey Gray, Burt Holzman, Carl Lundstedt, Oksana Shadura, Nicholas Smith, John Thiltges:
Collaborative Computing Support for Analysis Facilities Exploiting Software as Infrastructure Techniques. CoRR abs/2203.10161 (2022) - 2021
- [i32]Wen Guan, Tadashi Maeno, Brian Paul Bockelman, Torre J. Wenaus, Fahui Lin, Siarhei Padolski, Rui Zhang, Aleksandr Alekseev:
An intelligent Data Delivery Service for and beyond the ATLAS experiment. CoRR abs/2103.00523 (2021) - [i31]Matous Adamec, Garhan Attebury, Kenneth Bloom, Brian Bockelman, Carl Lundstedt, Oksana Shadura, John Thiltges:
Coffea-casa: an analysis facility prototype. CoRR abs/2103.01871 (2021) - [i30]Edgar Fajardo Hernandez, Aashay Arora, Diego Davila, Richard Gao, Frank Würthwein, Brian Bockelman:
Systematic benchmarking of HTTPS third party copy on 100Gbps links using XRootD. CoRR abs/2103.12116 (2021) - [i29]Derek Weitzel, Shawn McKee, Brian Paul Bockelman, John Thiltges, Marian Babik, Ilija Vukotic:
The Service Analysis and Network Diagnosis DataPipeline. CoRR abs/2112.03074 (2021) - 2020
- [i28]Zhe Zhang, Brian Bockelman, Derek Weitzel, Xinkai Zhang, Hamid Vakilzadian, David Swanson:
Trua: Efficient Task Replication for Flexible User-defined Availability in Scientific Grids. CoRR abs/2004.05723 (2020) - [i27]Zhe Zhang, Brian Bockelman, Derek Weitzel, David Swanson:
Exploring Erasure Coding Techniques for High Availability of Intermediate Data. CoRR abs/2004.05729 (2020) - [i26]Oksana Shadura, Brian Paul Bockelman, Philippe Canal, Danilo Piparo, Zhe Zhang:
ROOT I/O compression improvements for HEP analysis. CoRR abs/2004.10531 (2020) - [i25]Marian Babik, Shawn McKee, Pedro Andrade, Brian Paul Bockelman, Robert W. Gardner, Edgar Mauricio Fajardo Hernandez, Edoardo Martelli, Ilija Vukotic, Derek Weitzel, Marián Zvada:
WLCG Networks: Update on Monitoring and Analytics. CoRR abs/2007.00598 (2020) - [i24]Edgar Fajardo Hernandez, Marián Zvada, Derek Weitzel, Mats Rynge, John Hicks, Matyas Selmeci, Brian Lin, Pascal Paschos, Brian Bockelman, Igor Sfiligoi, Andrew Hanushevsky, Frank Würthwein:
Creating a content delivery network for general science on the internet backbone using XCaches. CoRR abs/2007.01408 (2020) - [i23]Wen Guan, Tadashi Maeno, Gancho Dimitrov, Brian Paul Bockelman, Torre J. Wenaus, Vakhtang Tsulaia, Nicolò Magini:
Towards an Intelligent Data Delivery Service. CoRR abs/2007.01791 (2020) - [i22]Brian Bockelman, Andrea Ceccanti, Fabrizio Furano, A. Paul Millar, Dmitry Litvintsev, Alessandra Forti:
Third-party transfers in WLCG using HTTP. CoRR abs/2007.03490 (2020) - [i21]Brian Bockelman, Andrea Ceccanti, Ian Collier, Linda Cornwall, Thomas Dack, Jaroslav Guenther, Mario Lassnig, Maarten Litmaath, A. Paul Millar, Mischa Sallé, Hannah Short, Jeny Teheran, Romain Wartel:
WLCG Authorisation from X.509 to Tokens. CoRR abs/2007.03602 (2020) - [i20]Edgar Fajardo Hernandez, Frank Würthwein, Brian Bockelman, Miron Livny, Greg Thain, James Alexander Clark, Peter Couvares, Josh Willis:
Adapting LIGO workflows to run in the Open Science Grid. CoRR abs/2011.14995 (2020) - 2019
- [i19]Martin Barisits, Thomas Beermann, Frank Berghaus, Brian Bockelman, Joaquin Bogado, David Cameron, Dimitrios Christidis, Diego Ciangottini, Gancho Dimitrov, Markus Elsing, Vincent Garonne, Alessandro Di Girolamo, Luc Goossens, Wen Guan, Jaroslav Guenther, Tomas Javurek, Dietmar Kuhn, Mario Lassnig, Fernando Lopez, Nicolò Magini, Angelos Molfetas, Armin Nairz, Farid Ould-Saada, Stefan Prenner, Cedric Serfon, Graeme A. Stewart, Eric Vaandering, Petya Vasileva, Ralph Vigne, Tobias Wegner:
Rucio - Scientific Data Management. CoRR abs/1902.09857 (2019) - [i18]Derek Weitzel, Marián Zvada, Ilija Vukotic, Robert W. Gardner, Brian Bockelman, Mats Rynge, Edgar Fajardo Hernandez, Brian Lin, Matyas Selmeci:
StashCache: A Distributed Caching Federation for the Open Science Grid. CoRR abs/1905.06911 (2019) - [i17]Alex Withers, Brian Bockelman, Derek Weitzel, Duncan A. Brown, Jason Patton, Jeff Gaynor, Jim Basney, Todd Tannenbaum, You Alex Gao, Zach Miller:
SciTokens: Demonstrating Capability-Based Access to Remote Scientific Data using HTCondor. CoRR abs/1905.09816 (2019) - [i16]Oksana Shadura, Brian Paul Bockelman, Vassil Vassilev:
Evolution of ROOT package management. CoRR abs/1906.04622 (2019) - [i15]Oksana Shadura, Brian Paul Bockelman:
ROOT I/O compression algorithms and their performance impact within Run 3. CoRR abs/1906.04624 (2019) - [i14]Brian Bockelman, Zhe Zhang, Oksana Shadura:
Speeding HEP Analysis with ROOT Bulk I/O. CoRR abs/1906.08169 (2019) - 2018
- [i13]Guilherme Amadio, Brian Bockelman, Philippe Canal, Danilo Piparo, Enric Tejedor, Zhe Zhang:
Increasing Parallelism in the ROOT I/O Subsystem. CoRR abs/1804.03326 (2018) - [i12]Alex Withers, Brian Bockelman, Derek Weitzel, Duncan A. Brown, Jeff Gaynor, Jim Basney, Todd Tannenbaum, Zach Miller:
SciTokens: Capability-Based Secure Access to Remote Scientific Data. CoRR abs/1807.04728 (2018) - [i11]Zhe Zhang, Brian Bockelman, Derek Weitzel, David Swanson:
Discovering Job Preemptions in the Open Science Grid. CoRR abs/1807.06639 (2018) - [i10]Oksana Shadura, Brian Paul Bockelman, Vassil Vassilev:
Extending ROOT through Modules. CoRR abs/1812.03145 (2018) - [i9]Oksana Shadura, Vassil Vassilev, Brian Paul Bockelman:
Continuous Performance Benchmarking Framework for ROOT. CoRR abs/1812.03149 (2018) - 2017
- [i8]Zhe Zhang, Brian Bockelman:
Exploring compression techniques for ROOT IO. CoRR abs/1704.06976 (2017) - [i7]Derek Weitzel, Brian Bockelman, Duncan A. Brown, Peter Couvares, Frank Würthwein, Edgar Fajardo Hernandez:
Data Access for LIGO on the OSG. CoRR abs/1705.06202 (2017) - [i6]Jim Pivarski, Peter Elmer, Brian Bockelman, Zhe Zhang:
Fast Access to Columnar, Hierarchical Data via Code Transformation. CoRR abs/1708.08319 (2017) - [i5]Burt Holzman, Lothar Bauerdick, Brian Bockelman, Dave Dykstra, Ian Fisk, Stuart Fuess, Gabriele Garzoglio, Maria Girone, Oliver Gutsche, Dirk Hufnagel, Hyunwoo Kim, Robert Kennedy, Nicolò Magini, David Mason, Panagiotis Spentzouris, Anthony Tiradani, Steven Timm, Eric Wayne Vaandering:
HEPCloud, a New Paradigm for HEP Facilities: CMS Amazon Web Services Investigation. CoRR abs/1710.00100 (2017) - [i4]Brian Bockelman, Zhe Zhang, Jim Pivarski:
Optimizing ROOT IO For Analysis. CoRR abs/1711.02659 (2017) - 2015
- [i3]Lothar Bauerdick, Brian Bockelman, Peter Elmer, Stephen Gowdy, Matevz Tadel, Frank Würthwein:
Designing Computing System Architecture and Models for the HL-LHC era. CoRR abs/1507.07430 (2015) - [i2]Kenneth Bloom, Tommaso Boccali, Brian Bockelman, Daniel C. Bradley, Sridhara Dasu, Jeff Dost, Federica Fanzago, Igor Sfiligoi, Alja Mrak Tadel, Matevz Tadel, Carl Vuosalo, Frank Würthwein, Avi Yagil, Marián Zvada:
Any Data, Any Time, Anywhere: Global Data Access for Science. CoRR abs/1508.01443 (2015) - 2014
- [i1]David Abdurachmanov, Brian Bockelman, Peter Elmer, Giulio Eulisse, Robert Knight, Shahzad Muzaffar:
Heterogeneous High Throughput Scientific Computing with APM X-Gene and Intel Xeon Phi. CoRR abs/1410.3441 (2014)
Coauthor Index
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