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2020 – today
- 2021
[j19]Alexandre Souvorov, Richa Agarwala
:
SAUTE: sequence assembly using target enrichment. BMC Bioinform. 22(1): 375 (2021)
2010 – 2019
- 2019
- [j18]Eric W. Sayers, Richa Agarwala, Evan Bolton, J. Rodney Brister, Kathi Canese, Karen Clark, Ryan Connor, Nicolas Fiorini, Kathryn Funk, Timothy Hefferon, J. Bradley Holmes, Sunghwan Kim, Avi Kimchi, Paul A. Kitts, Stacy Lathrop, Zhiyong Lu, Thomas L. Madden, Aron Marchler-Bauer, Lon Phan, Valerie A. Schneider, Conrad L. Schoch, Kim D. Pruitt, James Ostell:
Database resources of the National Center for Biotechnology Information. Nucleic Acids Res. 47(Database-Issue): D23-D28 (2019) - 2010
- [j17]Xusheng Wang, Richa Agarwala, John A. Capra, Zugen Chen, Deanna M. Church, Daniel C. Ciobanu, Zhengsheng Li, Lu Lu, Khyobeni Mozhui, Megan K. Mulligan, Stanley F. Nelson, Katherine S. Pollard, William Taylor, Donald B. Thomason, Robert W. Williams:
High-throughput sequencing of the DBA/2J mouse genome. BMC Bioinform. 11(S-4): O7 (2010)
2000 – 2009
- 2009
- [j16]William Klimke, Richa Agarwala, Azat Badretdin, Slava Chetvernin, Stacy Ciufo, Boris Fedorov, Boris Kiryutin, Kathleen O'Neill, Wolfgang Resch, Sergei Resenchuk, Susan Schafer, Igor Tolstoy, Tatiana A. Tatusova:
The National Center for Biotechnology Information's Protein Clusters Database. Nucleic Acids Res. 37(Database-Issue): 216-223 (2009) - 2008
- [j15]Aleksandr Morgulis, George Coulouris, Yan Raytselis, Thomas L. Madden, Richa Agarwala, Alejandro A. Schäffer:
Database indexing for production MegaBLAST searches. Bioinform. 24(16): 1757-1764 (2008) - [j14]Aleksandr Morgulis, George Coulouris, Yan Raytselis, Thomas L. Madden, Richa Agarwala, Alejandro A. Schäffer:
Database indexing for production MegaBLAST searches. Bioinform. 24(24): 2942 (2008) - 2007
- [j13]Jason S. Papadopoulos, Richa Agarwala:
COBALT: constraint-based alignment tool for multiple protein sequences. Bioinform. 23(9): 1073-1079 (2007) - [j12]Alejandro A. Schäffer, Edward Stallknecht Rice, William J. Cook, Richa Agarwala:
rh_tsp_map 3.0: end-to-end radiation hybrid mapping with improved speed and quality control. Bioinform. 23(9): 1156-1158 (2007) - [j11]Sergey A. Shiryev, Jason S. Papadopoulos, Alejandro A. Schäffer, Richa Agarwala:
Improved BLAST searches using longer words for protein seeding. Bioinform. 23(21): 2949-2951 (2007) - 2006
- [j10]Aleksandr Morgulis, E. Michael Gertz, Alejandro A. Schäffer, Richa Agarwala:
WindowMasker: window-based masker for sequenced genomes. Bioinform. 22(2): 134-141 (2006) - [j9]Aleksandr Morgulis, E. Michael Gertz, Alejandro A. Schäffer, Richa Agarwala:
A Fast and Symmetric DUST Implementation to Mask Low-Complexity DNA Sequences. J. Comput. Biol. 13(5): 1028-1040 (2006) - 2000
- [j8]Richa Agarwala, Leslie G. Biesecker, Alejandro A. Schäffer:
Inverse inbreeding coefficient problems with an application to linkage analysis of recessive diseases in inbred populations. Discret. Appl. Math. 104(1-3): 3-44 (2000)
1990 – 1999
- 1999
- [j7]Richa Agarwala, Vineet Bafna, Martin Farach, Mike Paterson, Mikkel Thorup:
On the Approximability of Numerical Taxonomy (Fitting Distances by Tree Metrics). SIAM J. Comput. 28(3): 1073-1085 (1999) - [c6]Richa Agarwala, Leslie G. Biesecker, Alejandro A. Schäffer:
Inverse Inbreeding Coefficient Problems with an Application to Linkage Analysis of Recessive Diseases in Inbred Populations. SODA 1999: 840-841 - 1997
- [j6]Richa Agarwala, Serafim Batzoglou, Vlado Dancík, Scott E. Decatur, Sridhar Hannenhalli, Martin Farach, S. Muthukrishnan, Steven Skiena:
Local Rules for Protein Folding on a Triangular Lattice and Generalized Hydrophobicity in the HP Model. J. Comput. Biol. 4(3): 275-296 (1997) - [c5]Richa Agarwala, Serafim Batzoglou, Vlado Dancík, Scott E. Decatur, Martin Farach, Sridhar Hannenhalli, S. Muthukrishnan, Steven Skiena:
Local rules for protein folding on a triangular lattice and generalized hydrophobicity in the HP model. RECOMB 1997: 1-2 - [c4]Richa Agarwala, Serafim Batzoglou, Vlado Dancík, Scott E. Decatur, Martin Farach, Sridhar Hannenhalli, Steven Skiena:
Local Rules for Protein Folding on a Triangular Lattice and Generalized Hydrophobicity in the HP Model. SODA 1997: 390-399 - 1996
- [j5]Richa Agarwala, David Fernández-Baca:
Simple Algorithms for Perfect Phylogeny and Triangulating Colored Graphs. Int. J. Found. Comput. Sci. 7(1): 11-22 (1996) - [j4]Richa Agarwala, David Fernández-Baca:
Weighted Multidimensional Search and Its Application to Convex Optimization. SIAM J. Comput. 25(1): 83-99 (1996) - [c3]Richa Agarwala, Vineet Bafna, Martin Farach, Babu O. Narayanan, Mike Paterson, Mikkel Thorup:
On the Approximability of Numerical Taxonomy (Fitting Distances by Tree Metrics). SODA 1996: 365-372 - 1995
- [j3]Richa Agarwala, David Fernández-Baca:
Weighted Search in the Plane. Inf. Process. Lett. 54(2): 97-100 (1995) - [j2]Richa Agarwala, David Fernández-Baca, Giora Slutzki:
Fast Algorithms for Inferring Evolutionary Trees. J. Comput. Biol. 2(3): 397-407 (1995) - 1994
- [j1]Richa Agarwala, David Fernández-Baca:
A Polynomial-Time Algorithm for the Perfect Phylogeny Problem when the Number of Character States is Fixed. SIAM J. Comput. 23(6): 1216-1224 (1994) - 1993
- [c2]Richa Agarwala, David Fernández-Baca:
A Polynomial-Time Algorithm for the Perfect Phylogeny Problem when the Number of Character States is Fixed. FOCS 1993: 140-147 - 1992
- [c1]Richa Agarwala, David Fernández-Baca:
Solving the Lagrangian Dual when the Number of Constraints is Fixed. FSTTCS 1992: 164-175
Coauthor Index
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