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2020 – today
- 2023
[i1]Soichi Hayashi, Bradley Caron, Anibal Solon Heinsfeld, Sophia Vinci-Booher, Brent C. McPherson, Daniel N. Bullock, Giulia Berto, J. Guiomar Niso, Sandra Hanekamp, Daniel Levitas, Lindsey Kitchell, Josiah Leong, Filipi N. Silva, Serge Koudoro, Hanna Willis, Jasleen Jolly, Derek Pisner, Taylor Zuidema, Jan Kurzwaski, Koulla Mikellidou, Aurore Bussalb, Christopher Rorden, Conner Victory, Dheeraj Bhatia, Dogu Baran Aydogan, Frank C. Yeh, Franco Delogu
, Javier Guaje, Jelle Veraart, Jeremy Fischer, Joshua Faskowitz, Maximilien Chaumon, Ricardo Fabrega, David Hunt, Shawn McKee, Shaw T. Brown, Stephanie Heyman, Vittorio Iacovella, Amanda Mejia, Daniele Marinazzo, R. Cameron Craddock, Emanuele Olivetti, Jamie Hanson, Paolo Avesani, Eleftherios Garyfallidis, Daniel Stanzione, James P. Carson, Robert Henschel, David Y. Hancock, Craig A. Stewart, David M. Schnyer, Damian Eke, Russell A. Poldrack, Nathalie George, Holly Bridge, Ilaria Sani, Winrich Freiwald, Aina Puce, Nicholas Port, Franco Pestilli:
brainlife.io: A decentralized and open source cloud platform to support neuroscience research. CoRR abs/2306.02183 (2023)
2010 – 2019
- 2016
- [c14]James P. Carson, Monique Y. Rennie, Michael Danilchik, Kent L. Thornburg, Sandra Rugonyi:
A chicken embryo cardiac outflow tract atlas for registering changes due to abnormal blood flow. EMBC 2016: 1236-1239 - 2015
- [j9]Volodymyr Shcherbatyy, James P. Carson, Murat Yaylaoglu, Katharina Jäckle, Frauke Grabbe, Maren Brockmeyer, Halenur Yavuz, Gregor Eichele:
A Digital Atlas of Ion Channel Expression Patterns in the Two-Week-Old Rat Brain. Neuroinformatics 13(1): 111-125 (2015) - 2014
- [j8]Richard E. Jacob, James P. Carson:
Automated measurement of heterogeneity in CT images of healthy and diseased rat lungs using variogram analysis of an octree decomposition. BMC Medical Imaging 14: 1 (2014) - [c13]Mathew Thomas, Matthew J. Marshall, Erin A. Miller, Andrew P. Kuprat, Kerstin Kleese van Dam, James P. Carson:
3D imaging of microbial biofilms: Integration of synchrotron imaging and an interactive visualization interface. EMBC 2014: 3304-3307 - 2013
- [j7]Andrew P. Kuprat, Senthil Kabilan, James P. Carson, Richard A. Corley, Daniel R. Einstein:
A bidirectional coupling procedure applied to multiscale respiratory modeling. J. Comput. Phys. 244: 148-167 (2013) - [j6]Lu Liu, Paul K. Commean, Charles Hildebolt, David R. Sinacore, Fred W. Prior, James P. Carson, Ioannis A. Kakadiaris, Tao Ju:
Automated, Foot-Bone Registration Using Subdivision-Embedded Atlases for Spatial Mapping of Bone Mineral Density. J. Digit. Imaging 26(3): 554-562 (2013) - 2012
- [c12]Kerstin Kleese van Dam, James P. Carson, Abigail L. Corrigan, Daniel R. Einstein, Zoe Guillen, Brandi Heath, Andrew P. Kuprat, Ingela Lanekoff, Carina Lansing, Julia Laskin, Dongsheng Li, Yan Liu, Matthew J. Marshall, Erin A. Miller, Galya Orr, Paulo Pinheiro da Silva, Seun Ryu, Craig Szymanski, Mathew Thomas:
Velo and REXAN - Integrated data management and high speed analysis for experimental facilities. eScience 2012: 1-9 - [c11]James P. Carson, Andrew P. Kuprat, Sean M. Colby, Cassi A. Davis, Christopher A. Basciano, Kevin Greene, John Feo, Andrew Kennedy:
Detecting distance between injected microspheres and target tumor via 3D reconstruction of tissue sections. EMBC 2012: 1149-1152 - [c10]Mathew Thomas, Brandi S. Heath, Julia Laskin, Dongsheng Li, Ellen Liu, Katrina Hui, Andrew P. Kuprat, Kerstin Kleese van Dam, James P. Carson:
Visualization of high resolution spatial mass spectrometric data during acquisition. EMBC 2012: 5545-5548 - [c9]Yen H. Le, Uday Kurkure, Nikos Paragios, Tao Ju, James P. Carson, Ioannis A. Kakadiaris:
Similarity-Based Appearance-Prior for Fitting a Subdivision Mesh in Gene Expression Images. MICCAI (1) 2012: 577-584 - 2011
- [c8]Uday Kurkure, Yen H. Le, Nikos Paragios, James P. Carson, Tao Ju, Ioannis A. Kakadiaris:
Landmark/image-based deformable registration of gene expression data. CVPR 2011: 1089-1096 - [c7]Matthew A. Enlow, Tao Ju, Ioannis A. Kakadiaris, James P. Carson:
Lossless 3-D reconstruction and registration of semi-quantitative gene expression data in the mouse brain. EMBC 2011: 8086-8089 - [c6]Uday Kurkure, Yen H. Le, Nikos Paragios, Tao Ju, James P. Carson, Ioannis A. Kakadiaris:
Markov Random Field-based fitting of a subdivision-based geometric atlas. ICCV 2011: 2540-2547 - 2010
- [j5]James P. Carson, Daniel R. Einstein, Kevin R. Minard, Michelle V. Fanucchi, Christopher D. Wallis, Richard A. Corley:
High resolution lung airway cast segmentation with proper topology suitable for computational fluid dynamic simulations. Comput. Medical Imaging Graph. 34(7): 572-578 (2010)
2000 – 2009
- 2009
- [j4]Xiangmin Jiao, Daniel R. Einstein, Vladimir Dyedov, James P. Carson:
Automatic identification and truncation of boundary outlets in complex imaging-derived biomedical geometries. Medical Biol. Eng. Comput. 47(9): 989-999 (2009) - 2007
- [j3]Musodiq Bello, Tao Ju, James P. Carson, Joe D. Warren, Wah Chiu, Ioannis A. Kakadiaris:
Learning-Based Segmentation Framework for Tissue Images Containing Gene Expression Data. IEEE Trans. Medical Imaging 26(5): 728-744 (2007) - 2005
- [j2]James P. Carson, Tao Ju, Hui-Chen Lu, Christina Thaller, Mei Xu, Sarah L. Pallas, Michael C. Crair, Joe D. Warren, Wah Chiu, Gregor Eichele:
A Digital Atlas to Characterize the Mouse Brain Transcriptome. PLoS Comput. Biol. 1(4) (2005) - [j1]Tao Ju, Joe D. Warren, James P. Carson, Gregor Eichele, Christina Thaller, Wah Chiu, Musodiq Bello, Ioannis A. Kakadiaris:
Building 3D surface networks from 2D curve networks with application to anatomical modeling. Vis. Comput. 21(8-10): 764-773 (2005) - [c5]James P. Carson, Christina Thaller, Musodiq Bello, Wah Chiu, Tao Ju, Joe D. Warren, Ioannis A. Kakadiaris, Gregor Eichele:
Data Mining in situ Gene Expression Patterns at Cellular Resolution. CSB Workshops 2005: 141-142 - [c4]James P. Carson, Tao Ju, Christina Thaller, Musodiq Bello, Joe D. Warren, Gregor Eichele, Wah Chiu:
Data Mining in situ Gene Expression Patterns at Cellular Resolution. CSB Workshops 2005: 358 - [c3]Musodiq Bello, Tao Ju, Joe D. Warren, James P. Carson, Wah Chiu, Christina Thaller, Gregor Eichele, Ioannis A. Kakadiaris:
Hybrid Segmentation Framework for Tissue Images Containing Gene Expression Data. MICCAI 2005: 254-261 - 2004
- [c2]Ioannis A. Kakadiaris, Musodiq Bello, Shiva Arunachalam, Wei Kang, Tao Ju, Joe D. Warren, James P. Carson, Wah Chiu, Christina Thaller, Gregor Eichele:
Landmark-Driven, Atlas-Based Segmentation of Mouse Brain Tissue Images Containing Gene Expression Data. MICCAI (1) 2004: 192-199 - 2003
- [c1]Joe D. Warren, Tao Ju, Gregor Eichele, Christina Thaller, Wah Chiu, James P. Carson:
A geometric database for gene expression data. Symposium on Geometry Processing 2003: 166-176
Coauthor Index
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