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Journal Articles
- 2011
[j7]Bernard J. Pope
, Blake G. Fitch, Michael Pitman, John Jeremy Rice, Matthias Reumann:
Performance of Hybrid Programming Models for Multiscale Cardiac Simulations: Preparing for Petascale Computation. IEEE Trans. Biomed. Eng. 58(10): 2965-2969 (2011)- 2008
- [j6]Blake G. Fitch, Aleksandr Rayshubskiy, Maria Eleftheriou, T. J. Christopher Ward, Mark Giampapa, Michael Pitman, Jed W. Pitera, William C. Swope, Robert S. Germain:
Blue Matter: Scaling of N-body simulations to one atom per node. IBM J. Res. Dev. 52(1-2): 145-158 (2008) - 2005
- [j5]Robert F. Enenkel, Blake G. Fitch, Robert S. Germain, Fred G. Gustavson, A. Martin, Mark P. Mendell, Jed W. Pitera, Michael Pitman, Aleksandr Rayshubskiy, Frank Suits, William C. Swope, T. J. Christopher Ward:
Custom math functions for molecular dynamics. IBM J. Res. Dev. 49(2-3): 465-474 (2005) - [j4]Frank Suits, Michael Pitman, Jed W. Pitera, William C. Swope, Robert S. Germain:
Overview of molecular dynamics techniques and early scientific results from the Blue Gene project. IBM J. Res. Dev. 49(2-3): 475-488 (2005) - 2003
- [j3]Blake G. Fitch, Robert S. Germain, Mark P. Mendell, Jed W. Pitera, Michael Pitman, Aleksandr Rayshubskiy, Yuk Yin Sham, Frank Suits, William C. Swope, T. J. Christopher Ward, Yuriy Zhestkov, Ruhong Zhou:
Blue Matter, an application framework for molecular simulation on Blue Gene. J. Parallel Distributed Comput. 63(7-8): 759-773 (2003) - 2001
- [j2]Frances E. Allen, George S. Almási, Wanda Andreoni, Daniel K. Beece, Bruce J. Berne, Arthur A. Bright, José R. Brunheroto, Calin Cascaval, José G. Castaños, Paul Coteus, Paul Crumley, Alessandro Curioni, Monty Denneau, Wilm E. Donath, Maria Eleftheriou, Blake G. Fitch, Bruce M. Fleischer, Christos J. Georgiou, Robert S. Germain, Mark Giampapa, Donna L. Gresh, Manish Gupta, Ruud A. Haring, C. T. Howard Ho, Peter H. Hochschild, Susan Flynn Hummel, Tiziana Jonas, Derek Lieber, Glenn J. Martyna, Kiran K. Maturu, José E. Moreira, Dennis M. Newns, Matthew Newton, Robert Philhower, Thomas Picunko, Jed W. Pitera, Michael Pitman, Rick A. Rand, Ajay K. Royyuru, Valentina Salapura, Alda Sanomiya, Rahul S. Shah, Yuk Yin Sham, Sarabjeet Singh, Marc Snir, Frank Suits, Richard A. Swetz, William C. Swope, Nagesh K. Vishnumurthy, T. J. Christopher Ward, Henry S. Warren Jr., Ruhong Zhou:
Blue Gene: A vision for protein science using a petaflop supercomputer. IBM Syst. J. 40(2): 310-327 (2001) - [j1]Michael Pitman, Wolfgang Huber, Hans W. Horn, Andreas Krämer, Julia E. Rice, William C. Swope:
FLASHFLOOD: A 3D Field-based similarity search and alignment method for flexible molecules. J. Comput. Aided Mol. Des. 15(7): 587-612 (2001)
Conference and Workshop Papers
- 2011
- [c7]Bernard J. Pope, Blake G. Fitch, Michael C. Pitman, John Jeremy Rice, Matthias Reumann:
Petascale computation performance of lightweight multiscale cardiac models using hybrid programming models. EMBC 2011: 433-436 - 2009
- [c6]Michael Pitman, Neco Ventura:
The use of resource list servers in IMS presence for developing networks. ICUMT 2009: 1-7 - 2006
- [c5]Blake G. Fitch, Aleksandr Rayshubskiy, Maria Eleftheriou, T. J. Christopher Ward, Mark Giampapa, Michael Pitman, Robert S. Germain:
Progress in Scaling Biomolecular Simulations to Petaflop Scale Platforms. Euro-Par Workshops 2006: 279-288 - [c4]Blake G. Fitch, Aleksandr Rayshubskiy, Maria Eleftheriou, T. J. Christopher Ward, Mark Giampapa, Yuriy Zhestkov, Michael Pitman, Frank Suits, Alan Grossfield, Jed W. Pitera, William C. Swope, Ruhong Zhou, Scott Feller, Robert S. Germain:
Blue Matter: Strong Scaling of Molecular Dynamics on Blue Gene/L. International Conference on Computational Science (2) 2006: 846-854 - [c3]Blake G. Fitch, Aleksandr Rayshubskiy, Maria Eleftheriou, T. J. Christopher Ward, Mark Giampapa, Michael Pitman, Robert S. Germain:
Molecular dynamics - Blue matter: approaching the limits of concurrency for classical molecular dynamics. SC 2006: 87 - 2005
- [c2]Robert S. Germain, Blake G. Fitch, Aleksandr Rayshubskiy, Maria Eleftheriou, Michael Pitman, Frank Suits, Mark Giampapa, T. J. Christopher Ward:
Blue matter on blue gene/L: massively parallel computation for biomolecular simulation. CODES+ISSS 2005: 207-212 - [c1]George Almási, Gyan Bhanot, Dong Chen, Maria Eleftheriou, Blake G. Fitch, Alan Gara, Robert S. Germain, John A. Gunnels, Manish Gupta, Philip Heidelberger, Michael Pitman, Aleksandr Rayshubskiy, James C. Sexton, Frank Suits, Pavlos Vranas, Robert Walkup, T. J. Christopher Ward, Yuriy Zhestkov, Alessandro Curioni, Wanda Andreoni, Charles Archer, José E. Moreira, Richard Loft, Henry M. Tufo, Theron Voran, Katherine Riley:
Early Experience with Scientific Applications on the Blue Gene/L Supercomputer. Euro-Par 2005: 560-570
Coauthor Index
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