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ORCIDIlya N. Shindyalov
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2000 – 2009
- 2006
[j13]Chittibabu Guda, Lipika R. Pal
, Ilya N. Shindyalov:
DMAPS: a database of multiple alignments for protein structures. Nucleic Acids Res. 34(Database-Issue): 273-276 (2006)- 2004
- [j12]Dmitry Pekurovsky, Ilya N. Shindyalov, Philip E. Bourne:
A case study of high-throughput biological data processing on parallel platforms. Bioinform. 20(12): 1940-1947 (2004) - [j11]Yuting Jia, T. Gregory Dewey, Ilya N. Shindyalov, Philip E. Bourne:
A New Scoring Function and Associated Statistical Significance for Structure Alignment by CE. J. Comput. Biol. 11(5): 787-799 (2004) - [j10]Chittibabu Guda, Sifang Lu, Eric D. Scheeff, Philip E. Bourne, Ilya N. Shindyalov:
CE-MC: a multiple protein structure alignment server. Nucleic Acids Res. 32(Web-Server-Issue): 100-103 (2004) - [j9]Wilfred W. Li, Robert W. Byrnes, Jim Hayes, Adam Birnbaum, Vicente M. Reyes, Atif Shahab, Coleman Mosley, Dmitry Pekurovsky, Greg B. Quinn, Ilya N. Shindyalov, Henri Casanova, Larry Ang, Fran Berman, Peter W. Arzberger, Mark A. Miller, Philip E. Bourne:
The Encyclopedia of Life Project: Grid Software and Deployment. New Gener. Comput. 22(2): 127-136 (2004) - [c7]Philip E. Bourne, C. K. J. Allerston, Werner G. Krebs, Wilfred W. Li, Ilya N. Shindyalov, Adam Godzik, Iddo Friedberg, Tong Liu, David L. Wild, Seungwoo Hwang, Zoubin Ghahramani, Li Chen, John D. Westbrook:
The Status of Structural Genomics Defined Through the Analysis of Current Targets and Structures. Pacific Symposium on Biocomputing 2004: 375-386 - 2003
- [j8]Nickolai Alexandrov, Ilya N. Shindyalov:
PDP: protein domain parser. Bioinform. 19(3): 429-430 (2003) - [c6]Dmitry Pekurovsky, Ilya N. Shindyalov, Philip E. Bourne:
Parallel Processing on Large Redudant Biological Data Sets: Protein Structures Classification with CEPAR. PARCO 2003: 661-668 - 2002
- [j7]Wilfred W. Li, Boojala V. B. Reddy, John G. Tate, Ilya N. Shindyalov, Philip E. Bourne:
CKAAPs DB: a Conserved Key Amino Acid Positions DataBase. Nucleic Acids Res. 30(1): 409-411 (2002) - [c5]Julia V. Ponomarenko, Philip E. Bourne, Ilya N. Shindyalov:
Building an automated classification of DNA-binding protein domains. ECCB 2002: 192-201 - 2001
- [j6]Ilya N. Shindyalov, Philip E. Bourne:
A database and tools for 3-D protein structure comparison and alignment using the Combinatorial Extension (CE) algorithm. Nucleic Acids Res. 29(1): 228-229 (2001) - [j5]Wilfred W. Li, Boojala V. B. Reddy, Ilya N. Shindyalov, Philip E. Bourne:
CKAAPs DB: a conserved key amino acid positions database. Nucleic Acids Res. 29(1): 329-331 (2001) - [c4]Chittibabu Guda, Eric D. Scheeff, Philip E. Bourne, Ilya N. Shindyalov:
A New Algorithm for the Alignment of Multiple Protein Structures Using Monte Carlo Optimization. Pacific Symposium on Biocomputing 2001: 275-286 - 2000
- [j4]Helen M. Berman, John D. Westbrook, Zukang Feng, Gary Gilliland, T. N. Bhat, Helge Weissig, Ilya N. Shindyalov, Philip E. Bourne:
The Protein Data Bank. Nucleic Acids Res. 28(1): 235-242 (2000)
1990 – 1999
- 1997
- [j3]Ilya N. Shindyalov, Philip E. Bourne:
Protein data representation and query using optimized data decomposition. Comput. Appl. Biosci. 13(5): 487-496 (1997) - 1995
- [c3]Ilya N. Shindyalov, Weider Chang, J. A. Cooper, Philip E. Bourne:
Design and use of a software framework to obtain information derived from macromolecular structure data. HICSS (5) 1995: 207-216 - [c2]Nikolay A. Kolchanov, Oleg V. Vishnevsky, Vladimir N. Babenko, Alexander E. Kel, Ilya N. Shindyalov:
Identification of CDNA Sequences by Specific Oligonucleotide Sets - A Computer Tool and Application. ISMB 1995: 206-214 - 1994
- [j2]Weider Chang, Ilya N. Shindyalov, Calton Pu, Philip E. Bourne:
Design and application of PDBlib, a C++ macromolecular class library. Comput. Appl. Biosci. 10(6): 575-586 (1994) - [c1]Weider Chang, Ilya N. Shindyalov, Calton Pu, Philip E. Bourne:
Design and Application of a C++ Macromolecular Class Library. ISMB 1994: 70-77 - 1992
- [j1]Victor B. Strelets, Ilya N. Shindyalov, Nikolay A. Kolchanov, Luciano Milanesi:
Fast, statistically based alignment of amino acid sequences on the base of diagonal fragments of DOT-matrices. Comput. Appl. Biosci. 8(6): 529-534 (1992)
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