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Journal Articles
- 2021
[j5]Phorutai Pearngam
, Sira Sriswasdi, Trairak Pisitkun, Andrew R. Jones:
MHCVision: estimation of global and local false discovery rate for MHC class I peptide binding prediction. Bioinform. 37(21): 3830-3838 (2021)- 2019
- [j4]Thammakorn Saethang, Kenneth Hodge, Chin-Rang Yang, Yue Zhao, Ingorn Kimkong, Mark A. Knepper, Trairak Pisitkun:
PTM-Logo: a program for generation of sequence logos based on position-specific background amino-acid probabilities. Bioinform. 35(24): 5313-5314 (2019) - 2018
- [j3]Thammakorn Saethang, Kenneth Hodge, Ingorn Kimkong, D. Michael Payne, Mark A. Knepper, Trairak Pisitkun:
AbDesigner3D: a structure-guided tool for peptide-based antibody production. Bioinform. 34(12): 2158-2160 (2018) - 2016
- [j2]Thammakorn Saethang, D. Michael Payne, Yingyos Avihingsanon, Trairak Pisitkun:
A machine learning strategy for predicting localization of post-translational modification sites in protein-protein interacting regions. BMC Bioinform. 17: 307 (2016) - 2014
- [j1]Fahad Saeed, Jason D. Hoffert, Trairak Pisitkun, Mark A. Knepper:
Exploiting thread-level and instruction-level parallelism to cluster mass spectrometry data using multicore architectures. Netw. Model. Anal. Health Informatics Bioinform. 3(1) (2014)
Conference and Workshop Papers
- 2012
- [c4]Fahad Saeed, Jason D. Hoffert, Trairak Pisitkun, Mark A. Knepper:
High performance phosphorylation site assignment algorithm for mass spectrometry data using multicore systems. BCB 2012: 667-672 - [c3]Fahad Saeed, Trairak Pisitkun, Mark A. Knepper, Jason D. Hoffert:
An efficient algorithm for clustering of large-scale mass spectrometry data. BIBM 2012: 1-4 - [c2]Fahad Saeed, Trairak Pisitkun, Jason D. Hoffert, Guanghui Wang, Marjan Gucek, Mark A. Knepper:
An efficient dynamic programming algorithm for phosphorylation site assignment of large-scale mass spectrometry data. BIBM Workshops 2012: 618-625 - 2011
- [c1]Fahad Saeed, Trairak Pisitkun, Mark A. Knepper, Jason D. Hoffert:
Mining Temporal Patterns from iTRAQ Mass Spectrometry(LC-MS/MS) Data. BICoB 2011: 152-159
Informal and Other Publications
- 2013
- [i2]Fahad Saeed, Trairak Pisitkun, Mark A. Knepper, Jason D. Hoffert:
An Efficient Algorithm for Clustering of Large-Scale Mass Spectrometry Data. CoRR abs/1301.0834 (2013) - 2011
- [i1]Fahad Saeed, Trairak Pisitkun, Mark A. Knepper, Jason D. Hoffert:
Mining Temporal Patterns from iTRAQ Mass Spectrometry(LC-MS/MS) Data. CoRR abs/1104.5510 (2011)
Coauthor Index
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