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Kyongbum Lee
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2010 – 2019
- 2017
- [c5]Neda Hassanpour, Nicholas Alden, Kyongbum Lee, Soha Hassoun:
An Advanced Workflow for Metabolite Annotation. BCB 2017: 582 - 2015
- [j10]Gautham Vivek Sridharan, Ehsan Ullah, Soha Hassoun, Kyongbum Lee:
Discovery of substrate cycles in large scale metabolic networks using hierarchical modularity. BMC Syst. Biol. 9: 5 (2015) - [j9]Mona Yousofshahi, Sara Manteiga, Charmian Wu, Kyongbum Lee, Soha Hassoun:
PROXIMAL: a method for Prediction of Xenobiotic Metabolism. BMC Syst. Biol. 9: 94 (2015) - [j8]Ehsan Ullah, Mark Walker, Kyongbum Lee, Soha Hassoun:
PreProPath: An Uncertainty-Aware Algorithm for Identifying Predictable Profitable Pathways in Biochemical Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 12(6): 1405-1415 (2015) - 2013
- [j7]Mona Yousofshahi, Michael Orshansky, Kyongbum Lee, Soha Hassoun:
Probabilistic strain optimization under constraint uncertainty. BMC Syst. Biol. 7: 29 (2013) - [c4]Mona Yousofshahi, Michael Orshansky, Kyongbum Lee, Soha Hassoun:
Gene modification identification under flux capacity uncertainty. DAC 2013: 45:1-45:5 - 2012
- [j6]Gautham Vivek Sridharan, Michael Yi, Soha Hassoun, Kyongbum Lee:
Metabolic Flux-Based Modularity using Shortest Retroactive distances. BMC Syst. Biol. 6: 155 (2012) - 2011
- [j5]Gautham Vivek Sridharan, Soha Hassoun, Kyongbum Lee:
Identification of Biochemical Network Modules Based on Shortest Retroactive Distances. PLoS Comput. Biol. 7(11) (2011) - 2010
- [j4]Brett A. Boghigian, Hai Shi, Kyongbum Lee, Blaine A. Pfeifer:
Utilizing elementary mode analysis, pathway thermodynamics, and a genetic algorithm for metabolic flux determination and optimal metabolic network design. BMC Syst. Biol. 4: 49 (2010)
2000 – 2009
- 2009
- [c3]Ehsan Ullah, Kyongbum Lee, Soha Hassoun:
An algorithm for identifying dominant-edge metabolic pathways. ICCAD 2009: 144-150 - 2007
- [j3]Jeongah Yoon, Yaguang Si, Ryan Nolan, Kyongbum Lee:
Modular decomposition of metabolic reaction networks based on flux analysis and pathway projection. Bioinform. 23(18): 2433-2440 (2007) - [c2]Foteini Makrydaki, Kyongbum Lee, Christos Georgakis:
Tendency Stoichiometric Modeling of Metabolic Pathways. ACC 2007: 594-599 - [c1]Jeongah Yoon, Kyongbum Lee:
Metabolic Flux Profiling of Reaction Modules in Liver Drug Transformation. Pacific Symposium on Biocomputing 2007: 193-204 - 2006
- [j2]Jeongah Yoon, Anselm Blumer, Kyongbum Lee:
An algorithm for modularity analysis of directed and weighted biological networks based on edge-betweenness centrality. Bioinform. 22(24): 3106-3108 (2006) - 2004
- [j1]Kyongbum Lee, Daehee Hwang, Tadaaki Yokoyama, George Stephanopoulos, Gregory Stephanopoulos, Martin L. Yarmush:
Identification of optimal classification functions for biological sample and state discrimination from metabolic profiling data. Bioinform. 20(6): 959-969 (2004)
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