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ORCIDIan Walsh
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2020 – today
- 2023
[i3]Karim Lekadir, Aasa Feragen
, Abdul Joseph Fofanah, Alejandro F. Frangi, Alena Buyx, Anais Emelie, Andrea Lara, Antonio R. Porras, An-Wen Chan, Arcadi Navarro, Ben Glocker, Benard Ohene Botwe, Bishesh Khanal, Brigit Beger, Carol C. Wu, Celia Cintas, Curtis P. Langlotz, Daniel Rueckert, Deogratias Mzurikwao, Dimitrios I. Fotiadis, Doszhan Zhussupov, Enzo Ferrante, Erik Meijering, Eva Weicken, Fabio A. González, Folkert W. Asselbergs, Fred W. Prior, Gabriel P. Krestin, Gary S. Collins, Geletaw Sahle Tegenaw, Georgios Kaissis, Gianluca Misuraca, Gianna Tsakou, Girish Dwivedi, Haridimos Kondylakis, Harsha Jayakody, Henry C. Woodruff, Hugo J. W. L. Aerts, Ian Walsh, Ioanna Chouvarda, Irène Buvat, Islem Rekik, James S. Duncan, Jayashree Kalpathy-Cramer, Jihad Zahir, Jinah Park, John Mongan, Judy W. Gichoya, Julia A. Schnabel, et al.:
FUTURE-AI: International consensus guideline for trustworthy and deployable artificial intelligence in healthcare. CoRR abs/2309.12325 (2023)- 2020
- [i2]Ian Walsh, Dmytro Fishman, Dario Garcia-Gasulla, Tiina Titma, Jen Harrow, Fotis E. Psomopoulos, Silvio C. E. Tosatto:
Recommendations for machine learning validation in biology. CoRR abs/2006.16189 (2020)
2010 – 2019
- 2019
- [j22]Ian Walsh, Terry Nguyen-Khuong, Katherine Wongtrakul-Kish, Shi Jie Tay, Daniel Chew, Tasha José, Christopher H. Taron, Pauline M. Rudd:
GlycanAnalyzer: software for automated interpretation of N-glycan profiles after exoglycosidase digestions. Bioinform. 35(4): 688-690 (2019) - [j21]Ian Walsh, Terry Nguyen-Khuong, Katherine Wongtrakul-Kish, Shi Jie Tay, Daniel Chew, Tasha José, Christopher H. Taron, Pauline M. Rudd:
GlycanAnalyzer: software for automated interpretation of N-glycan profiles after exoglycosidase digestions. Bioinform. 35(17): 3214 (2019) - 2018
- [j20]Sophie Zhao, Ian Walsh, Jodie L. Abrahams, Louise Royle, Terry Nguyen-Khuong, Daniel Spencer, Daryl L. Fernandes, Nicolle H. Packer, Pauline M. Rudd, Matthew P. Campbell:
GlycoStore: a database of retention properties for glycan analysis. Bioinform. 34(18): 3231-3232 (2018) - 2017
- [j19]Damiano Piovesan, Ian Walsh, Giovanni Minervini, Silvio C. E. Tosatto:
FELLS: fast estimator of latent local structure. Bioinform. 33(12): 1889-1891 (2017) - 2016
- [j18]Ian Walsh, Gianluca Pollastri, Silvio C. E. Tosatto:
Correct machine learning on protein sequences: a peer-reviewing perspective. Briefings Bioinform. 17(5): 831-840 (2016) - 2015
- [j17]Ian Walsh, Manuel Giollo, Tomás Di Domenico, Carlo Ferrari, Olav Zimmermann, Silvio C. E. Tosatto:
Comprehensive large-scale assessment of intrinsic protein disorder. Bioinform. 31(2): 201-208 (2015) - [j16]Emilio Potenza, Tomás Di Domenico, Ian Walsh, Silvio C. E. Tosatto:
MobiDB 2.0: an improved database of intrinsically disordered and mobile proteins. Nucleic Acids Res. 43(Database-Issue): 315-320 (2015) - 2014
- [j15]Predrag Kukic, Claudio Mirabello, Giuseppe Tradigo, Ian Walsh, Pierangelo Veltri, Gianluca Pollastri:
Toward an accurate prediction of inter-residue distances in proteins using 2D recursive neural networks. BMC Bioinform. 15: 6 (2014) - [j14]Tomás Di Domenico, Emilio Potenza, Ian Walsh, R. Gonzalo Parra, Manuel Giollo, Giovanni Minervini, Damiano Piovesan, Awais Ihsan, Carlo Ferrari, Andrey V. Kajava, Silvio C. E. Tosatto:
RepeatsDB: a database of tandem repeat protein structures. Nucleic Acids Res. 42(Database-Issue): 352-357 (2014) - [j13]Ian Walsh, Flavio Seno, Silvio C. E. Tosatto, Antonio Trovato:
PASTA 2.0: an improved server for protein aggregation prediction. Nucleic Acids Res. 42(Webserver-Issue): 301-307 (2014) - 2013
- [j12]Tomás Di Domenico, Ian Walsh, Silvio C. E. Tosatto:
Analysis and consensus of currently available intrinsic protein disorder annotation sources in the MobiDB database. BMC Bioinform. 14(S-7): S3 (2013) - 2012
- [j11]Ian Walsh, Alberto J. M. Martin, Tomás Di Domenico, Silvio C. E. Tosatto:
ESpritz: accurate and fast prediction of protein disorder. Bioinform. 28(4): 503-509 (2012) - [j10]Tomás Di Domenico, Ian Walsh, Alberto J. M. Martin, Silvio C. E. Tosatto:
MobiDB: a comprehensive database of intrinsic protein disorder annotations. Bioinform. 28(15): 2080-2081 (2012) - [j9]Ian Walsh, Giovanni Minervini, Alessandra Corazza, Gennaro Esposito, Silvio C. E. Tosatto, Federico Fogolari:
Bluues server: electrostatic properties of wild-type and mutated protein structures. Bioinform. 28(16): 2189-2190 (2012) - [j8]Ian Walsh, Francesco Sirocco, Giovanni Minervini, Tomás Di Domenico, Carlo Ferrari, Silvio C. E. Tosatto:
RAPHAEL: recognition, periodicity and insertion assignment of solenoid protein structures. Bioinform. 28(24): 3257-3264 (2012) - 2011
- [j7]Alberto J. M. Martin, Michele Vidotto, Filippo Boscariol, Tomás Di Domenico, Ian Walsh, Silvio C. E. Tosatto:
RING: networking interacting residues, evolutionary information and energetics in protein structures. Bioinform. 27(14): 2003-2005 (2011) - [j6]Ian Walsh, Alberto J. M. Martin, Tomás Di Domenico, Alessandro Vullo, Gianluca Pollastri, Silvio C. E. Tosatto:
CSpritz: accurate prediction of protein disorder segments with annotation for homology, secondary structure and linear motifs. Nucleic Acids Res. 39(Web-Server-Issue): 190-196 (2011) - 2010
- [j5]Alberto J. M. Martin, Ian Walsh, Silvio C. E. Tosatto:
MOBI: a web server to define and visualize structural mobility in NMR protein ensembles. Bioinform. 26(22): 2916-2917 (2010)
2000 – 2009
- 2009
- [j4]Ian Walsh, Alberto J. M. Martin, Catherine Mooney, Enrico Rubagotti, Alessandro Vullo, Gianluca Pollastri:
Ab initio and homology based prediction of protein domains by recursive neural networks. BMC Bioinform. 10 (2009) - [c1]Ian Walsh, Alessandro Vullo, Gianluca Pollastri:
Recursive Neural Networks for Undirected Graphs for Learning Molecular Endpoints. PRIB 2009: 391-403 - [i1]Ian Walsh, Alessandro Vullo, Gianluca Pollastri:
An adaptive model for learning molecular endpoints. Similarity-based learning on structures 2009 - 2008
- [j3]Alberto J. M. Martin, Davide Baù, Alessandro Vullo, Ian Walsh, Gianluca Pollastri:
Long-Range Information and Physicality Constraints Improve predicted protein Contact Maps. J. Bioinform. Comput. Biol. 6(5): 1001-1020 (2008) - 2006
- [j2]Alessandro Vullo, Ian Walsh, Gianluca Pollastri:
A two-stage approach for improved prediction of residue contact maps. BMC Bioinform. 7: 180 (2006) - [j1]Davide Baù, Alberto J. M. Martin, Catherine Mooney, Alessandro Vullo, Ian Walsh, Gianluca Pollastri:
Distill: a suite of web servers for the prediction of one-, two- and three-dimensional structural features of proteins. BMC Bioinform. 7: 402 (2006)
Coauthor Index
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