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2020 – today
- 2024
[j5]Simon Graham
, Quoc Dang Vu, Mostafa Jahanifar, Martin Weigert, Uwe Schmidt, Wenhua Zhang, Jun Zhang, Sen Yang, Jinxi Xiang, Xiyue Wang, Josef Lorenz Rumberger, Elias Baumann, Peter Hirsch, Lihao Liu, Chenyang Hong, Angelica I. Avilés-Rivero, Ayushi Jain, Heeyoung Ahn, Yiyu Hong, Hussam Azzuni, Min Xu, Mohammad Yaqub, Marie-Claire Blache, Benoît Piégu, Bertrand Vernay, Tim Scherr, Moritz Böhland, Katharina Löffler, Jiachen Li, Weiqin Ying, Chixin Wang, David R. J. Snead, Shan-E-Ahmed Raza, Fayyaz Minhas, Nasir M. Rajpoot:
CoNIC Challenge: Pushing the frontiers of nuclear detection, segmentation, classification and counting. Medical Image Anal. 92: 103047 (2024)- [j4]Johannes Seiffarth, Tim Scherr, Bastian Wollenhaupt, Oliver Neumann, Hanno Scharr, Dietrich Kohlheyer, Ralf Mikut, Katharina Nöh:
ObiWan-Microbi: OMERO-based integrated workflow for annotating microbes in the cloud. SoftwareX 26: 101638 (2024) - 2023
- [b1]Tim Scherr:
Deep Learning-Based Particle Detection and Instance Segmentation for Microscopy Images. Karlsruhe Institute of Technology, Germany, 2023 - [i3]Simon Graham, Quoc Dang Vu, Mostafa Jahanifar, Martin Weigert, Uwe Schmidt, Wenhua Zhang, Jun Zhang, Sen Yang, Jinxi Xiang, Xiyue Wang, Josef Lorenz Rumberger, Elias Baumann, Peter Hirsch, Lihao Liu, Chenyang Hong, Angelica I. Avilés-Rivero, Ayushi Jain, Heeyoung Ahn, Yiyu Hong, Hussam Azzuni, Min Xu, Mohammad Yaqub, Marie-Claire Blache, Benoît Piégu, Bertrand Vernay, Tim Scherr, Moritz Böhland, Katharina Löffler, Jiachen Li, Weiqin Ying, Chixin Wang, Dagmar Kainmueller, Carola-Bibiane Schönlieb, Shuolin Liu, Dhairya Talsania, Yughender Meda, Prakash Mishra, Muhammad Ridzuan, Oliver Neumann, Marcel P. Schilling, Markus Reischl, Ralf Mikut, Banban Huang, Hsiang-Chin Chien, Ching-Ping Wang, Chia-Yen Lee, Hong-Kun Lin, Zaiyi Liu, Xipeng Pan, Chu Han, Jijun Cheng, Muhammad Dawood, Srijay Deshpande, Raja Muhammad Saad Bashir, Adam Shephard, Pedro Costa, João D. Nunes, Aurélio Campilho, Jaime S. Cardoso, Hrishikesh P. S, Densen Puthussery, Devika R. G, Jiji C V, Ye Zhang, Zijie Fang, Zhifan Lin, Yongbing Zhang, Chunhui Lin, Liukun Zhang, Lijian Mao, Min Wu, Thi Tuong Vi Vo, Soo-Hyung Kim, Taebum Lee, Satoshi Kondo, Satoshi Kasai, Pranay Dumbhare, Vedant Phuse, Yash Dubey, Ankush Jamthikar, Trinh Thi Le Vuong, Jin Tae Kwak, Dorsa Ziaei, Hyun Jung, Tianyi Miao, David R. J. Snead, Shan-E-Ahmed Raza, Fayyaz Minhas, Nasir M. Rajpoot:
CoNIC Challenge: Pushing the Frontiers of Nuclear Detection, Segmentation, Classification and Counting. CoRR abs/2303.06274 (2023) - 2022
- [j3]Marcel P. Schilling, Tim Scherr, Friedrich R. Münke, Oliver Neumann, Mark Schutera, Ralf Mikut, Markus Reischl:
Automated Annotator Variability Inspection for Biomedical Image Segmentation. IEEE Access 10: 2753-2765 (2022) - [i2]Moritz Böhland, Oliver Neumann, Marcel P. Schilling, Markus Reischl, Ralf Mikut, Katharina Löffler, Tim Scherr:
ciscNet - A Single-Branch Cell Instance Segmentation and Classification Network. CoRR abs/2202.13960 (2022) - 2020
- [j2]Tim Scherr, Karolin Streule, Andreas Bartschat, Moritz Böhland, Johannes Stegmaier, Markus Reischl, Véronique Orian-Rousseau, Ralf Mikut:
BeadNet: deep learning-based bead detection and counting in low-resolution microscopy images. Bioinform. 36(17): 4668-4670 (2020) - [i1]Tim Scherr, Katharina Löffler, Moritz Böhland, Ralf Mikut:
Cell Segmentation and Tracking using Distance Transform Predictions and Movement Estimation with Graph-Based Matching. CoRR abs/2004.01486 (2020)
2010 – 2019
- 2019
- [j1]Andreas Bartschat, Stephan Allgeier, Tim Scherr, Johannes Stegmaier, Sebastian Bohn, Klaus-Martin Reichert, Arjan Kuijper, Markus Reischl, Oliver Stachs, Bernd Köhler, Ralf Mikut:
Fuzzy tissue detection for real-time focal control in corneal confocal microscopy. Autom. 67(10): 879-888 (2019)
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