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ORCIDCharles W. O'Donnell
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2010 – 2019
- 2014
[j6]Jérôme Waldispühl
, Charles W. O'Donnell, Sebastian Will, Srinivas Devadas, Rolf Backofen, Bonnie Berger:
Simultaneous Alignment and Folding of Protein Sequences. J. Comput. Biol. 21(7): 477-491 (2014)- 2012
- [c8]Vijay Ganesh, Charles W. O'Donnell, Mate Soos, Srinivas Devadas, Martin C. Rinard, Armando Solar-Lezama:
Lynx: A Programmatic SAT Solver for the RNA-Folding Problem. SAT 2012: 143-156 - 2011
- [b1]Charles W. O'Donnell:
Ensemble modeling of [beta]-sheet proteins. Massachusetts Institute of Technology, Cambridge, MA, USA, 2011 - [j5]Charles W. O'Donnell, Jérôme Waldispühl, Mieszko Lis, Randal Halfmann, Srinivas Devadas, Susan Lindquist, Bonnie Berger:
A method for probing the mutational landscape of amyloid structure. Bioinform. 27(13): 34-42 (2011) - [j4]Solomon Shenker, Charles W. O'Donnell, Srinivas Devadas, Bonnie Berger, Jérôme Waldispühl:
Efficient Traversal of Beta-Sheet Protein Folding Pathways Using Ensemble Models. J. Comput. Biol. 18(11): 1635-1647 (2011) - [c7]Solomon Shenker, Charles W. O'Donnell, Srinivas Devadas, Bonnie Berger, Jérôme Waldispühl:
Efficient Traversal of Beta-Sheet Protein Folding Pathways Using Ensemble Models. RECOMB 2011: 408-423
2000 – 2009
- 2009
- [c6]Jérôme Waldispühl, Charles W. O'Donnell, Sebastian Will, Srinivas Devadas, Rolf Backofen, Bonnie Berger:
Simultaneous Alignment and Folding of Protein Sequences. RECOMB 2009: 339-355 - 2007
- [j3]Blaise Gassend, Charles W. O'Donnell, William Thies, Andrew Lee, Marten van Dijk, Srinivas Devadas:
Learning biophysically-motivated parameters for alpha helix prediction. BMC Bioinform. 8(S-5) (2007) - [j2]G. Edward Suh, Charles W. O'Donnell, Srinivas Devadas:
Aegis: A Single-Chip Secure Processor. IEEE Des. Test Comput. 24(6): 570-580 (2007) - 2006
- [c5]Luis F. G. Sarmenta, Marten van Dijk, Charles W. O'Donnell, Jonathan Rhodes, Srinivas Devadas:
Virtual monotonic counters and count-limited objects using a TPM without a trusted OS. STC 2006: 27-42 - [c4]Blaise Gassend, Charles W. O'Donnell, William Thies, Andrew Lee, Marten van Dijk, Srinivas Devadas:
Predicting Secondary Structure of All-Helical Proteins Using Hidden Markov Support Vector Machines. PRIB 2006: 93-104 - 2005
- [j1]G. Edward Suh, Charles W. O'Donnell, Srinivas Devadas:
AEGIS: A single-chip secure processor. Inf. Secur. Tech. Rep. 10(2): 63-73 (2005) - [c3]G. Edward Suh, Charles W. O'Donnell, Ishan Sachdev, Srinivas Devadas:
Design and Implementation of the AEGIS Single-Chip Secure Processor Using Physical Random Functions. ISCA 2005: 25-36 - 2004
- [c2]Charles W. O'Donnell, Vinod Vaikuntanathan:
Information Leak in the Chord Lookup Protocol. Peer-to-Peer Computing 2004: 28-35 - 2003
- [c1]Steven M. Nowick, Charles W. O'Donnell:
On the Existence of Hazard-Free Multi-Level Logic. ASYNC 2003: 109-120
Coauthor Index
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