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ORCIDTianyu Cui
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2020 – today
- 2024
[j13]Alexander Capstick
, Francesca Palermo, Kimberley Zakka, Nan Fletcher-Lloyd, Chloe Walsh, Tianyu Cui, Samaneh Kouchaki, Raphaella Jackson, Martin Tran, Michael Crone, Kirsten Jensen, Paul S. Freemont, Ravi Vaidyanathan, Magdalena Kolanko, Jessica True, Sarah Daniels, David Wingfield, Ramin Nilforooshan, Payam M. Barnaghi:
Digital remote monitoring for screening and early detection of urinary tract infections. npj Digit. Medicine 7(1) (2024)- [c14]Muhammad Arslan Masood, Tianyu Cui, Samuel Kaski:
Deep Bayesian Experimental Design for Drug Discovery. AIDD@ICANN 2024: 149-159 - [c13]Tianyu Cui, Hongxia Li, Jingya Wang, Ye Shi:
Harmonizing Generalization and Personalization in Federated Prompt Learning. ICML 2024 - [c12]Liang Jiao, Jianqiang Li, Wenxiu Zhang, Tianyu Cui, Yi Zhou, Yujia Zhu, Qingyun Liu:
Measuring Encrypted DNS Service with TLS1.3 Support over IPv6. ISCC 2024: 1-7 - [i15]Tianyu Cui, Yanling Wang, Chuanpu Fu, Yong Xiao, Sijia Li, Xinhao Deng, Yunpeng Liu, Qinglin Zhang, Ziyi Qiu, Peiyang Li, Zhixing Tan, Junwu Xiong, Xinyu Kong, Zujie Wen, Ke Xu, Qi Li:
Risk Taxonomy, Mitigation, and Assessment Benchmarks of Large Language Model Systems. CoRR abs/2401.05778 (2024) - [i14]Alexander Capstick, Tianyu Cui, Yu Chen, Payam M. Barnaghi:
Representation Learning of Daily Movement Data Using Text Encoders. CoRR abs/2405.04494 (2024) - [i13]Tianyu Cui, Hongxia Li, Jingya Wang, Ye Shi:
Harmonizing Generalization and Personalization in Federated Prompt Learning. CoRR abs/2405.09771 (2024) - [i12]Yu Chen, Tianyu Cui, Alexander Capstick, Nan Fletcher-Lloyd, Payam M. Barnaghi:
Enabling Regional Explainability by Automatic and Model-agnostic Rule Extraction. CoRR abs/2406.17885 (2024) - [i11]Tianyu Cui, Shiyu Ma, Ziang Chen, Tong Xiao, Shimin Tao, Yilun Liu, Shenglin Zhang, Duoming Lin, Changchang Liu, Yuzhe Cai, Weibin Meng, Yongqian Sun, Dan Pei:
LogEval: A Comprehensive Benchmark Suite for Large Language Models In Log Analysis. CoRR abs/2407.01896 (2024) - 2023
- [b1]Tianyu Cui:
Interaction Detection with Probabilistic Deep Learning for Genetics. Aalto University, Espoo, Finland, 2023 - [j12]Tianyuan Liu, Bohao Zou, Manman He, Yongfei Hu, Yiying Dou, Tianyu Cui, Puwen Tan, Shaobin Li, Shuan Rao, Yan Huang, Sixi Liu, Kaican Cai, Dong Wang:
LncReader: identification of dual functional long noncoding RNAs using a multi-head self-attention mechanism. Briefings Bioinform. 24(1) (2023) - [j11]Guiying Wu, Mengmeng Song, Ke Wang, Tianyu Cui, Zicong Jiao, Liyan Ji, Xuan Gao, Jiayin Wang, Tao Liu, Xuefeng Xia, Huan Fang, Yanfang Guan, Xin Yi:
DELFMUT: duplex sequencing-oriented depth estimation model for stable detection of low-frequency mutations. Briefings Bioinform. 24(5) (2023) - [c11]Vishnu Raj, Tianyu Cui, Markus Heinonen, Pekka Marttinen:
Incorporating functional summary information in Bayesian neural networks using a Dirichlet process likelihood approach. AISTATS 2023: 6741-6763 - [c10]Shutong Ding, Tianyu Cui, Jingya Wang, Ye Shi:
Two Sides of The Same Coin: Bridging Deep Equilibrium Models and Neural ODEs via Homotopy Continuation. NeurIPS 2023 - [i10]Shutong Ding, Tianyu Cui, Jingya Wang, Ye Shi:
Two Sides of The Same Coin: Bridging Deep Equilibrium Models and Neural ODEs via Homotopy Continuation. CoRR abs/2310.09583 (2023) - 2022
- [j10]Juanjuan Kang, Qiang Tang, Jun He, Le Li, Nianling Yang, Shuiyan Yu, Mengyao Wang, Yuchen Zhang, Jiahao Lin, Tianyu Cui, Yongfei Hu, Puwen Tan, Jun Cheng, Hailong Zheng, Dong Wang, Xi Su, Wei Chen, Yan Huang:
RNAInter v4.0: RNA interactome repository with redefined confidence scoring system and improved accessibility. Nucleic Acids Res. 50(D1): 326-332 (2022) - [j9]Tianyu Cui, Yiying Dou, Puwen Tan, Zhen Ni, Tianyuan Liu, Duolin Wang, Yan Huang, Kaican Cai, Xiaoyang Zhao, Dong Xu, Hao Lin, Dong Wang:
RNALocate v2.0: an updated resource for RNA subcellular localization with increased coverage and annotation. Nucleic Acids Res. 50(D1): 333-339 (2022) - [j8]Haibo Zhu, Hao Fu, Tianyu Cui, Lin Ning, Huaguo Shao, Yehan Guo, Yanting Ke, Jiayi Zheng, Hongyan Lin, Xin Wu, Guanghao Liu, Jun He, Xin Han, Wenlin Li, Xiaoyang Zhao, Huasong Lu, Dong Wang, Kongfa Hu, Xiaopei Shen:
RNAPhaSep: a resource of RNAs undergoing phase separation. Nucleic Acids Res. 50(D1): 340-346 (2022) - [j7]Jun Cheng, Yunqing Lin, Linfu Xu, Kechen Chen, Qi Li, Kaixin Xu, Lin Ning, Juanjuan Kang, Tianyu Cui, Yan Huang, Xiaoyang Zhao, Dong Wang, Yanhui Li, Xi Su, Bin Yang:
ViRBase v3.0: a virus and host ncRNA-associated interaction repository with increased coverage and annotation. Nucleic Acids Res. 50(D1): 928-933 (2022) - [c9]Tianyu Cui, Yogesh Kumar, Pekka Marttinen, Samuel Kaski:
Deconfounded Representation Similarity for Comparison of Neural Networks. NeurIPS 2022 - [c8]Tianyu Cui, Gang Xiong, Chang Liu, Junzheng Shi, Peipei Fu, Gaopeng Gou:
GALG: Linking Addresses in Tracking Ecosystem Using Graph Autoencoder with Link Generation. ECML/PKDD (6) 2022: 270-285 - [i9]Tianyu Cui, Yogesh Kumar, Pekka Marttinen, Samuel Kaski:
Deconfounded Representation Similarity for Comparison of Neural Networks. CoRR abs/2202.00095 (2022) - [i8]Tianyu Cui, Gaopeng Gou, Gang Xiong:
6GCVAE: Gated Convolutional Variational Autoencoder for IPv6 Target Generation. CoRR abs/2204.09425 (2022) - [i7]Tianyu Cui, Gaopeng Gou, Gang Xiong, Zhen Li, Mingxin Cui, Chang Liu:
SiamHAN: IPv6 Address Correlation Attacks on TLS Encrypted Traffic via Siamese Heterogeneous Graph Attention Network. CoRR abs/2204.09465 (2022) - [i6]Tianyu Cui, Chang Liu, Gaopeng Gou, Junzheng Shi, Gang Xiong:
A Comprehensive Study of Accelerating IPv6 Deployment. CoRR abs/2204.09539 (2022) - [i5]Tianyu Cui, Gaopeng Gou, Gang Xiong, Chang Liu, Peipei Fu, Zhen Li:
6GAN: IPv6 Multi-Pattern Target Generation via Generative Adversarial Nets with Reinforcement Learning. CoRR abs/2204.09839 (2022) - [i4]Vishnu Raj, Tianyu Cui, Markus Heinonen, Pekka Marttinen:
Look beyond labels: Incorporating functional summary information in Bayesian neural networks. CoRR abs/2207.01234 (2022) - 2021
- [j6]Ruiqi Li, Lingyun Lu, Tianyu Cui, Weiwei Gu, Shaodong Ma, Gang Xu, Harry Eugene Stanley:
Assessing the Attraction of Cities on Venture Capital From a Scaling Law Perspective. IEEE Access 9: 48052-48063 (2021) - [j5]Lin Ning, Tianyu Cui, Boyang Zheng, Nuo Wang, Jiaxin Luo, Beilei Yang, Mengze Du, Jun Cheng, Yiying Dou, Dong Wang:
MNDR v3.0: mammal ncRNA-disease repository with increased coverage and annotation. Nucleic Acids Res. 49(Database-Issue): D160-D164 (2021) - [j4]Yan Huang, Jing Wang, Yue Zhao, Huafeng Wang, Tianyuan Liu, Yuhe Li, Tianyu Cui, Weiyi Li, Yige Feng, Jiaxin Luo, Jiaqi Gong, Lin Ning, Yong Zhang, Dong Wang, Yang Zhang:
cncRNAdb: a manually curated resource of experimentally supported RNAs with both protein-coding and noncoding function. Nucleic Acids Res. 49(Database-Issue): D65-D70 (2021) - [c7]Tianyu Cui, Gaopeng Gou, Gang Xiong, Chang Liu, Peipei Fu, Zhen Li:
6GAN: IPv6 Multi-Pattern Target Generation via Generative Adversarial Nets with Reinforcement Learning. INFOCOM 2021: 1-10 - [c6]Tianyu Cui, Gaopeng Gou, Gang Xiong, Zhen Li, Mingxin Cui, Chang Liu:
SiamHAN: IPv6 Address Correlation Attacks on TLS Encrypted Traffic via Siamese Heterogeneous Graph Attention Network. USENIX Security Symposium 2021: 4329-4346 - 2020
- [j3]Yunqing Lin, Tianyuan Liu, Tianyu Cui, Zhao Wang, Yuncong Zhang, Puwen Tan, Yan Huang, Jia Yu, Dong Wang:
RNAInter in 2020: RNA interactome repository with increased coverage and annotation. Nucleic Acids Res. 48(Database-Issue): D189-D197 (2020) - [c5]Tianyu Cui, Pekka Marttinen, Samuel Kaski:
Learning Global Pairwise Interactions with Bayesian Neural Networks. ECAI 2020: 1087-1094 - [c4]Lei Xu, Gang Xiong, Gaopeng Gou, Jie Chen, Tianyu Cui, Tianyi Shan:
MTLH: Video QoE Monitoring for Encrypted Traffic via Multi-Task Learning with Hierarchy. HPCC/DSS/SmartCity 2020: 441-448 - [c3]Tianyu Cui, Gaopeng Gou, Gang Xiong:
6GCVAE: Gated Convolutional Variational Autoencoder for IPv6 Target Generation. PAKDD (1) 2020: 609-622 - [c2]Tianyu Cui, Gang Xiong, Gaopeng Gou, Junzheng Shi, Wei Xia:
6VecLM: Language Modeling in Vector Space for IPv6 Target Generation. ECML/PKDD (4) 2020: 192-207 - [i3]Tianyu Cui, Aki S. Havulinna, Pekka Marttinen, Samuel Kaski:
Informative Gaussian Scale Mixture Priors for Bayesian Neural Networks. CoRR abs/2002.10243 (2020) - [i2]Tianyu Cui, Gang Xiong, Gaopeng Gou, Junzheng Shi, Wei Xia:
6VecLM: Language Modeling in Vector Space for IPv6 Target Generation. CoRR abs/2008.02213 (2020)
2010 – 2019
- 2019
- [c1]Tianyu Cui, Chang Liu, Gaopeng Gou, Junzheng Shi, Gang Xiong:
A Comprehensive Study of Accelerating IPv6 Deployment. IPCCC 2019: 1-8 - [i1]Tianyu Cui, Pekka Marttinen, Samuel Kaski:
Recovering Pairwise Interactions Using Neural Networks. CoRR abs/1901.08361 (2019) - 2018
- [j2]Tianyu Cui, Lin Zhang, Yan Huang, Ying Yi, Puwen Tan, Yue Zhao, Yongfei Hu, Liyan Xu, Enmin Li, Dong Wang:
MNDR v2.0: an updated resource of ncRNA-disease associations in mammals. Nucleic Acids Res. 46(Database-Issue): D371-D374 (2018) - 2017
- [j1]Ying Yi, Yue Zhao, Chunhua Li, Lin Zhang, Huiying Huang, Yana Li, Lanlan Liu, Ping Hou, Tianyu Cui, Puwen Tan, Yongfei Hu, Ting Zhang, Yan Huang, Xiaobo Li, Jia Yu, Dong Wang:
RAID v2.0: an updated resource of RNA-associated interactions across organisms. Nucleic Acids Res. 45(Database-Issue): D115-D118 (2017)
Coauthor Index
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