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Journal Articles
- 2024
[j9]Yuefan Lin, Zixiang Pan, Yuansong Zeng, Yuedong Yang
, Zhiming Dai:
Detecting novel cell type in single-cell chromatin accessibility data via open-set domain adaptation. Briefings Bioinform. 25(5) (2024)- [j8]Yuansong Zeng, Mai Luo, Ningyuan Shangguan, Peiyu Shi, Junxi Feng, Jin Xu, Ken Chen, Yutong Lu, Weijiang Yu, Yuedong Yang:
Deciphering cell types by integrating scATAC-seq data with genome sequences. Nat. Comput. Sci. 4(4): 285-298 (2024) - 2023
- [j7]Yuansong Zeng, Rui Yin, Mai Luo, Jianing Chen, Zixiang Pan, Yutong Lu, Weijiang Yu, Yuedong Yang:
Identifying spatial domain by adapting transcriptomics with histology through contrastive learning. Briefings Bioinform. 24(2) (2023) - [j6]Yuansong Zeng, Zhuoyi Wei, Qianmu Yuan, Sheng Chen, Weijiang Yu, Yutong Lu, Jianzhao Gao, Yuedong Yang:
Identifying B-cell epitopes using AlphaFold2 predicted structures and pretrained language model. Bioinform. 39(4) (2023) - 2022
- [j5]Yuansong Zeng, Zhuoyi Wei, Zixiang Pan, Yutong Lu, Yuedong Yang:
A robust and scalable graph neural network for accurate single-cell classification. Briefings Bioinform. 23(2) (2022) - [j4]Yuansong Zeng, Zhuoyi Wei, Weijiang Yu, Rui Yin, Yuchen Yuan, Bingling Li, Zhonghui Tang, Yutong Lu, Yuedong Yang:
Spatial transcriptomics prediction from histology jointly through Transformer and graph neural networks. Briefings Bioinform. 23(5) (2022) - [j3]Yuansong Zeng, Zhuoyi Wei, Fengqi Zhong, Zixiang Pan, Yutong Lu, Yuedong Yang:
A parameter-free deep embedded clustering method for single-cell RNA-seq data. Briefings Bioinform. 23(5) (2022) - 2021
- [j2]Xiang Zhou, Hua Chai, Yuansong Zeng, Huiying Zhao, Yuedong Yang:
scAdapt: virtual adversarial domain adaptation network for single cell RNA-seq data classification across platforms and species. Briefings Bioinform. 22(6) (2021) - 2019
- [j1]Zhe Zhang, Shiwen Yang, Yuansong Zeng, Shiwei Qu, Yikai Chen:
A Cylindrical Lens Antenna With Extremely Flat Beams. IEEE Access 7: 156675-156685 (2019)
Conference and Workshop Papers
- 2024
- [c7]Mai Luo, Yuansong Zeng, Jianing Chen, Ningyuan Shangguan, Wenhao Zhou, Yuedong Yang:
Accurately Deciphering Novel Cell Type in Spatially Resolved Single-Cell Data Through Optimal Transport. ISBRA (2) 2024: 107-118 - 2022
- [c6]Fengqi Zhong, Yuansong Zeng, Yubao Liu, Yuedong Yang:
SCdenoise: a reference-based scRNA-seq denoising method using semi-supervised learning. BIBM 2022: 182-185 - [c5]Zixiang Pan, Yuansong Zeng, Yuefan Lin, Weijiang Yu, Haokun Zhang, Yuedong Yang:
A Meta-learning based Graph-Hierarchical Clustering Method for Single Cell RNA-Seq Data. BIBM 2022: 226-232 - 2020
- [c4]Yuansong Zeng, Xiang Zhou, Jiahua Rao, Yutong Lu, Yuedong Yang:
Accurately Clustering Single-cell RNA-seq data by Capturing Structural Relations between Cells through Graph Convolutional Network. BIBM 2020: 519-522 - 2018
- [c3]Xianzhang Chen, Edwin Hsing-Mean Sha, Yuansong Zeng, Chaoshu Yang, Weiwen Jiang, Qingfeng Zhuge:
Efficient wear leveling for inodes of file systems on persistent memories. DATE 2018: 1524-1527 - [c2]Yuansong Zeng, Edwin Hsing-Mean Sha, Qingfeng Zhuge, Xianzhang Chen, Zhulin Ma, Lin Wu:
An Efficient File System for Hybrid In-Memory NVM and Block Devices. NVMSA 2018: 43-48 - 2016
- [c1]Xianzhang Chen, Edwin Hsing-Mean Sha, Weiwen Jiang, Qingfeng Zhuge, Junxi Chen, Jiejie Qin, Yuansong Zeng:
The design of an efficient swap mechanism for hybrid DRAM-NVM systems. EMSOFT 2016: 22:1-22:10
Coauthor Index
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