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2020 – today
- 2024
[c10]Daniel Vallejo-Aldana, Alonso Ramirez-Manzanares, Erick Jorge Canales-Rodríguez, Thomas Yu, Abraham Cisneros-Mejorado, Luis Concha, Jonathan Rafael-Patino, Jean-Philippe Thiran:
In-Silico Trained AI for Enhanced T2 Spectrum Imaging and Myelin Water Fraction Mapping in Preclinical 7T MRI. ISBI 2024: 1-5- 2023
- [j10]Timothy Bergquist
, Thomas Schaffter, Yao Yan, Thomas Yu, Justin Prosser, Jifan Gao, Guanhua Chen, Lukasz Charzewski, Zofia Nawalany, Ivan Brugere, Renata Retkute, Alidivinas Prusokas, Augustinas Prusokas, Yonghwa Choi, Sanghoon Lee, Junseok Choe, Inggeol Lee, Sunkyu Kim, Jaewoo Kang, Sean D. Mooney, Justin Guinney:
Evaluation of crowdsourced mortality prediction models as a framework for assessing artificial intelligence in medicine. J. Am. Medical Informatics Assoc. 31(1): 35-44 (2023) - [i8]Hongwei Bran Li, Gian Marco Conte, Syed Muhammad Anwar, Florian Kofler, Koen Van Leemput, Marie Piraud, Ivan Ezhov, Felix Meissen, Maruf Adewole, Anastasia Janas, Anahita Fathi Kazerooni, Dominic LaBella, Ahmed W. Moawad, Keyvan Farahani, James A. Eddy, Timothy Bergquist, Verena Chung, Russell Takeshi Shinohara, Farouk Dako, Walter I. Wiggins, Zachary Reitman, Chunhao Wang, Xinyang Liu, Zhifan Jiang, Ariana Familiar, Elaine Johanson, Zeke Meier, Christos Davatzikos, John B. Freymann, Justin S. Kirby, Michel Bilello, Hassan M. Fathallah-Shaykh, Roland Wiest, Jan Kirschke, Rivka R. Colen, Aikaterini Kotrotsou, Pamela LaMontagne, Daniel S. Marcus, Mikhail Milchenko, Arash Nazeri, Marc-André Weber, Abhishek Mahajan, Suyash Mohan, John Mongan, Christopher Hess, Soonmee Cha, Javier E. Villanueva-Meyer, Errol Colak, Priscila Crivellaro, András Jakab, Jake Albrecht, Udunna Anazodo, Mariam Aboian, Thomas Yu, Ujjwal Baid, Spyridon Bakas, Marius George Linguraru, Bjoern H. Menze, Juan Eugenio Iglesias, Benedikt Wiestler:
The Brain Tumor Segmentation (BraTS) Challenge 2023: Brain MR Image Synthesis for Tumor Segmentation (BraSyn). CoRR abs/2305.09011 (2023) - [i7]Thomas Yu:
The Average Rate of Convergence of the Exact Line Search Gradient Descent Method. CoRR abs/2305.09140 (2023) - 2022
- [j9]Chiara Maffei, Gabriel Girard, Kurt G. Schilling, Dogu Baran Aydogan, Nagesh Adluru, Andrey Zhylka, Ye Wu, Matteo Mancini, Andac Hamamci, Alessia Sarica, Achille Teillac, Steven H. Baete, Davood Karimi, Fang-Cheng Yeh, Mert E. Yildiz, Ali Gholipour, Yann Bihan-Poudec, Bassem Hiba, Andrea Quattrone, Aldo Quattrone, Tommy Boshkovski, Nikola Stikov, Pew-Thian Yap, Alberto De Luca, Josien P. W. Pluim, Alexander Leemans, Vivek Prabhakaran, Barbara B. Bendlin, Andrew L. Alexander, Bennett A. Landman, Erick Jorge Canales-Rodríguez, Muhamed Barakovic, Jonathan Rafael-Patino, Thomas Yu, Gaëtan Rensonnet, Simona Schiavi, Alessandro Daducci, Marco Pizzolato, Elda Fischi Gomez, Jean-Philippe Thiran, George Dai, Giorgia Grisot, Nikola Lazovski, Santi Puch, Marc Ramos, Paulo Rodrigues, Vesna Prckovska, Robert Jones, Julia Lehman, Suzanne N. Haber, Anastasia Yendiki:
Insights from the IronTract challenge: Optimal methods for mapping brain pathways from multi-shell diffusion MRI. NeuroImage 257: 119327 (2022) - [c9]Hamza Kebiri, Gabriel Girard, Yasser Alemán-Gómez, Thomas Yu, András Jakab, Erick Jorge Canales-Rodríguez, Meritxell Bach Cuadra:
Slice Estimation in Diffusion MRI of Neonatal and Fetal Brains in Image and Spherical Harmonics Domains Using Autoencoders. CDMRI@MICCAI 2022: 3-13 - [i6]Thomas Yu, Tom Hilbert, Gian Franco Piredda, Arun Joseph, Gabriele Bonanno, Salim Zenkhri, Patrick Omoumi, Meritxell Bach Cuadra, Erick Jorge Canales-Rodríguez, Tobias Kober, Jean-Philippe Thiran:
Validation and Generalizability of Self-Supervised Image Reconstruction Methods for Undersampled MRI. CoRR abs/2201.12535 (2022) - [i5]Yao Yan, Thomas Yu, Kathleen Muenzen, Sijia Liu, Connor Boyle, George Koslowski, Jiaxin Zheng, Nicholas J. Dobbins, Clement Essien, Hongfang Liu, Larsson Omberg, Meliha Yestigen, Bradley Taylor, James A. Eddy, Justin Guinney, Sean D. Mooney, Thomas Schaffter:
The NLP Sandbox: an efficient model-to-data system to enable federated and unbiased evaluation of clinical NLP models. CoRR abs/2206.14181 (2022) - 2021
- [j8]Francesco La Rosa, Thomas Yu, Germán Barquero, Jean-Philippe Thiran, Cristina Granziera, Meritxell Bach Cuadra:
MPRAGE to MP2RAGE UNI translation via generative adversarial network improves the automatic tissue and lesion segmentation in multiple sclerosis patients. Comput. Biol. Medicine 132: 104297 (2021) - [j7]Thomas Yu, Erick Jorge Canales-Rodríguez, Marco Pizzolato, Gian Franco Piredda, Tom Hilbert, Elda Fischi Gomez, Matthias Weigel, Muhamed Barakovic, Meritxell Bach Cuadra, Cristina Granziera, Tobias Kober, Jean-Philippe Thiran:
Model-informed machine learning for multi-component T2 relaxometry. Medical Image Anal. 69: 101940 (2021) - [j6]Erick Jorge Canales-Rodríguez, Marco Pizzolato, Gian Franco Piredda, Tom Hilbert, Nicolas Kunz, Caroline Pot, Thomas Yu, Raymond Salvador, Edith Pomarol-Clotet, Tobias Kober, Jean-Philippe Thiran, Alessandro Daducci:
Comparison of non-parametric T2 relaxometry methods for myelin water quantification. Medical Image Anal. 69: 101959 (2021) - [j5]Kurt G. Schilling, François Rheault, Laurent Petit, Colin B. Hansen, Vishwesh Nath, Fang-Cheng Yeh, Gabriel Girard, Muhamed Barakovic, Jonathan Rafael-Patino, Thomas Yu, Elda Fischi Gomez, Marco Pizzolato, Mario Ocampo-Pineda, Simona Schiavi, Erick Jorge Canales-Rodríguez, Alessandro Daducci, Cristina Granziera, Giorgio M. Innocenti, Jean-Philippe Thiran, Laura Mancini, Stephen J. Wastling, Sirio Cocozza, Maria Petracca, Giuseppe Pontillo, Matteo Mancini, Sjoerd B. Vos, Vejay N. Vakharia, John S. Duncan, Helena Melero, Lidia Manzanedo, Emilio Sanz-Morales, Ángel Peña-Melián, Fernando Calamante, Arnaud Attye, Ryan P. Cabeen, Laura Korobova, Arthur W. Toga, Anupa Ambili Vijayakumari, Drew Parker, Ragini Verma, Ahmed M. Radwan, Stefan Sunaert, Louise Emsell, Alberto De Luca, Alexander Leemans, Claude J. Bajada, Hamied A. Haroon, Hojjatollah Azadbakht, Maxime Chamberland, Sila Genc, Chantal M. W. Tax, Ping Hong Yeh, Rujirutana Srikanchana, Colin D. Mcknight, Joseph Yuan-Mou Yang, Jian Chen, Claire E. Kelly, Chun-Hung Yeh, Jérôme Cochereau, Jerome J. Maller, Thomas Welton, Fabien Almairac, Kiran K. Seunarine, Chris A. Clark, Fan Zhang, Nikos Makris, Alexandra J. Golby, Yogesh Rathi, Lauren J. O'Donnell, Yihao Xia, Dogu Baran Aydogan, Yonggang Shi, Francisco Guerreiro Fernandes, Mathijs Raemaekers, Shaun Warrington, Stijn Michielse, Alonso Ramirez-Manzanares, Luis Concha, Ramón Aranda, Mariano Rivera Meraz, Garikoitz Lerma-Usabiaga, Lucas Roitman, Lucius S. Fekonja, Navona Calarco, Michael Joseph, Hajer Nakua, Aristotle N. Voineskos, Philippe Karan, Gabrielle Grenier, Jon Haitz Legarreta, Nagesh Adluru, Veena A. Nair, Vivek Prabhakaran, Andrew L. Alexander, Koji Kamagata, Yuya Saito, Wataru Uchida, Christina Andica, Masahiro Abe, Roza G. Bayrak, Claudia A. M. Gandini Wheeler-Kingshott, Egidio D'Angelo, Fulvia Palesi, Giovanni Savini, Nicolò Rolandi, Pamela Guevara, Josselin Houenou, Narciso López-López, Jean-François Mangin, Cyril Poupon, Claudio Román, Andrea Vázquez, Chiara Maffei, Mavilde Arantes, José Paulo Andrade, Susana Maria Silva, Vince D. Calhoun, Eduardo Caverzasi, Simone Sacco, Michael Lauricella, Franco Pestilli, Daniel Bullock, Yang Zhan, Edith Brignoni-Pérez, Catherine Lebel, Jess E Reynolds, Igor Nestrasil, René Labounek, Christophe Lenglet, Amy Paulson, Stefania Aulicka, Sarah R. Heilbronner, Katja Heuer, Bramsh Qamar Chandio, Javier Guaje, Wei Tang, Eleftherios Garyfallidis, Rajikha Raja, Adam W. Anderson, Bennett A. Landman, Maxime Descoteaux:
Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset? NeuroImage 243: 118502 (2021) - [j4]Erick Jorge Canales-Rodríguez, Marco Pizzolato, Thomas Yu, Gian Franco Piredda, Tom Hilbert, Joaquim Radua, Tobias Kober, Jean-Philippe Thiran:
Revisiting the T2 spectrum imaging inverse problem: Bayesian regularized non-negative least squares. NeuroImage 244: 118582 (2021) - [c8]Yao Yan, Thomas Schaffter, Timothy Bergquist, Thomas Yu, Justin Prosser, Sean D. Mooney, Justin Guinney:
A Continuous Crowd-sourced Challenge for Benchmarking COVID-19 Health Outcome Prediction. AMIA 2021 - [c7]Mohammad Saeed Rad, Thomas Yu, Behzad Bozorgtabar, Jean-Philippe Thiran:
Test-Time Adaptation for Super-Resolution: You Only Need to Overfit on a Few More Images. ICCVW 2021: 1845-1854 - [c6]Hélène Lajous, Tom Hilbert, Christopher W. Roy, Sébastien Tourbier, Priscille de Dumast, Yasser Alemán-Gómez, Thomas Yu, Hamza Kebiri, Jean-Baptiste Ledoux, Patric Hagmann, Reto Meuli, Vincent Dunet, Mériam Koob, Matthias Stuber, Tobias Kober, Meritxell Bach Cuadra:
Simulated Half-Fourier Acquisitions Single-shot Turbo Spin Echo (HASTE) of the Fetal Brain: Application to Super-Resolution Reconstruction. UNSURE/PIPPI@MICCAI 2021: 157-167 - [c5]Mohammad Saeed Rad, Thomas Yu, Claudiu Musat, Hazim Kemal Ekenel, Behzad Bozorgtabar, Jean-Philippe Thiran:
Benefiting from Bicubically Down-Sampled Images for Learning Real-World Image Super-Resolution. WACV 2021: 1589-1598 - [i4]Mohammad Saeed Rad, Thomas Yu, Behzad Bozorgtabar, Jean-Philippe Thiran:
Test-Time Adaptation for Super-Resolution: You Only Need to Overfit on a Few More Images. CoRR abs/2104.02663 (2021) - [i3]Ujjwal Baid, Satyam Ghodasara, Michel Bilello, Suyash Mohan, Evan Calabrese, Errol Colak, Keyvan Farahani, Jayashree Kalpathy-Cramer, Felipe C. Kitamura, Sarthak Pati, Luciano M. Prevedello, Jeffrey D. Rudie, Chiharu Sako, Russell T. Shinohara, Timothy Bergquist, Rong Chai, James A. Eddy, Julia Elliott, Walter Reade, Thomas Schaffter, Thomas Yu, Jiaxin Zheng, BraTS Annotators, Christos Davatzikos, John Mongan, Christopher Hess, Soonmee Cha, Javier E. Villanueva-Meyer, John B. Freymann, Justin S. Kirby, Benedikt Wiestler, Priscila Crivellaro, Rivka R. Colen, Aikaterini Kotrotsou, Daniel S. Marcus, Mikhail Milchenko, Arash Nazeri, Hassan M. Fathallah-Shaykh, Roland Wiest, András Jakab, Marc-André Weber, Abhishek Mahajan, Bjoern H. Menze, Adam E. Flanders, Spyridon Bakas:
The RSNA-ASNR-MICCAI BraTS 2021 Benchmark on Brain Tumor Segmentation and Radiogenomic Classification. CoRR abs/2107.02314 (2021) - [i2]Hélène Lajous, Christopher W. Roy, Tom Hilbert, Priscille de Dumast, Sébastien Tourbier, Yasser Alemán-Gómez, Jérôme Yerly, Thomas Yu, Hamza Kebiri, Kelly Payette, Jean-Baptiste Ledoux, Reto Meuli, Patric Hagmann, András Jakab, Vincent Dunet, Mériam Koob, Tobias Kober, Matthias Stuber, Meritxell Bach Cuadra:
FaBiAN: A Fetal Brain magnetic resonance Acquisition Numerical phantom. CoRR abs/2109.03624 (2021) - 2020
- [j3]Timothy Bergquist, Yao Yan, Thomas Schaffter, Thomas Yu, Vikas Pejaver, Noah Hammarlund, Justin Prosser, Justin Guinney, Sean D. Mooney:
Piloting a model-to-data approach to enable predictive analytics in health care through patient mortality prediction. J. Am. Medical Informatics Assoc. 27(9): 1393-1400 (2020) - [c4]Hélène Lajous, Tom Hilbert, Christopher W. Roy, Sébastien Tourbier, Priscille de Dumast, Thomas Yu, Jean-Philippe Thiran, Jean-Baptiste Ledoux, Davide Piccini, Patric Hagmann, Reto Meuli, Tobias Kober, Matthias Stuber, Ruud B. van Heeswijk, Meritxell Bach Cuadra:
T2 Mapping from Super-Resolution-Reconstructed Clinical Fast Spin Echo Magnetic Resonance Acquisitions. MICCAI (2) 2020: 114-124 - [i1]Mohammad Saeed Rad, Thomas Yu, Claudiu Musat, Hazim Kemal Ekenel, Behzad Bozorgtabar, Jean-Philippe Thiran:
Benefitting from Bicubically Down-Sampled Images for Learning Real-World Image Super-Resolution. CoRR abs/2007.03053 (2020)
2010 – 2019
- 2019
- [c3]Thomas Yu, Marco Pizzolato, Gabriel Girard, Jonathan Rafael-Patino, Erick Jorge Canales-Rodríguez, Jean-Philippe Thiran:
Robust Biophysical Parameter Estimation with a Neural Network Enhanced Hamiltonian Markov Chain Monte Carlo Sampler. IPMI 2019: 818-829 - [c2]Thomas Yu, Marco Pizzolato, Erick Jorge Canales-Rodríguez, Jean-Philippe Thiran:
Robust T2 Relaxometry With Hamiltonian MCMC for Myelin Water Fraction Estimation. ISBI 2019: 1813-1817 - [c1]Arunima Srivastava, Ravali Adusumilli, Hunter Boyce, Daniel Garijo, Varun Ratnakar, Rajiv Mayani, Thomas Yu, Raghu Machiraju, Yolanda Gil, Parag Mallick:
Semantic workflows for benchmark challenges: Enhancing comparability, reusability and reproducibility. PSB 2019: 208-219 - 2017
- [j2]Philipp Grohs, Markus Sprecher, Thomas Yu:
Scattered manifold-valued data approximation. Numerische Mathematik 135(4): 987-1010 (2017)
1990 – 1999
- 1996
- [j1]David W. Rosen, Bert Bras, Steven L. Hassenzahl, Patrick J. Newcomb, Thomas Yu:
Towards computer-aided configuration design for the life cycle. J. Intell. Manuf. 7(2): 145-160 (1996)
Coauthor Index
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