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ORCIDLudmil B. Alexandrov
Person information
- affiliation: Los Alamos National Laboratory, NM, USA
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Journal Articles
- 2023
[j8]Marcos Díaz-Gay
, Raviteja Vangara, Mark Barnes, Xi Wang, S. M. Ashiqul Islam, Ian Vermes, Stephen Duke, Nithish Bharadhwaj Narasimman, Ting Yang, Zichen Jiang, Sarah J. Moody, Sergey Senkin, Paul Brennan, Michael R. Stratton, Ludmil B. Alexandrov:
Assigning mutational signatures to individual samples and individual somatic mutations with SigProfilerAssignment. Bioinform. 39(12) (2023)- 2022
- [j7]Erik N. Bergstrom, Mousumy Kundu, Noura Tbeileh, Ludmil B. Alexandrov:
Examining clustered somatic mutations with SigProfilerClusters. Bioinform. 38(13): 3470-3473 (2022) - 2020
- [j6]Erik N. Bergstrom, Mark Barnes, Iñigo Martincorena, Ludmil B. Alexandrov:
Generating realistic null hypothesis of cancer mutational landscapes using SigProfilerSimulator. BMC Bioinform. 21(1): 438 (2020) - 2018
- [j5]Xiaotu Ma, Yu Liu, Yanling Liu, Ludmil B. Alexandrov, Michael N. Edmonson, Charles Gawad, Xin Zhou, Yongjin Li, Michael Rusch, John Easton, Robert Huether, Veronica Gonzalez-Pena, Mark R. Wilkinson, Leandro Hermida, Sean Davis, Edgar Sioson, Stanley Pounds, Xueyuan Cao, Rhonda E. Ries, Zhaoming Wang, Xiang Chen, Li Dong, Sharon J. Diskin, Malcolm A. Smith, Jaime M. Guidry Auvil, Paul S. Meltzer, Ching C. Lau, Elizabeth J. Perlman, John M. Maris, Soheil Meshinchi, Stephen P. Hunger, Daniela S. Gerhard, Jinghui Zhang:
Pan-cancer genome and transcriptome analyses of 1, 699 paediatric leukaemias and solid tumours. Nat. 555(7696): 371-376 (2018) - 2016
- [j4]Ludmil B. Alexandrov, Alan R. Bishop, Kim Ø. Rasmussen, Boian S. Alexandrov:
The role of structural parameters in DNA cyclization. BMC Bioinform. 17: 68 (2016) - 2014
- [j3]Andrea Gobbi, Francesco Iorio, Kevin J. Dawson, David C. Wedge, David Tamborero, Ludmil B. Alexandrov, Núria López-Bigas, Mathew Garnett, Giuseppe Jurman, Julio Saez-Rodriguez:
Fast randomization of large genomic datasets while preserving alteration counts. Bioinform. 30(17): 617-623 (2014) - 2013
- [j2]Kristy Nowak-Lovato, Ludmil B. Alexandrov, Afsheen Banisadr, Amy L. Bauer, Alan R. Bishop, Anny Usheva, Fangping Mu, Elizabeth Hong-Geller, Kim Ø. Rasmussen, William S. Hlavacek, Boian S. Alexandrov:
Binding of Nucleoid-Associated Protein Fis to DNA Is Regulated by DNA Breathing Dynamics. PLoS Comput. Biol. 9(1) (2013) - 2007
- [j1]K. B. Blagoev, Bogdan Mihaila, B. J. Travis, Ludmil B. Alexandrov, Alan R. Bishop, Douglas M. Ranken, Stefan Posse, Charles Gasparovic, Andy R. Mayer, Cheryl J. Aine, István Ulbert, M. Morita, W. Müller, J. Connor, Eric Halgren:
Modelling the magnetic signature of neuronal tissue. NeuroImage 37(1): 137-148 (2007)
Informal and Other Publications
- 2017
- [i1]Daniel O'Malley, Velimir V. Vesselinov, Boian S. Alexandrov, Ludmil B. Alexandrov:
Nonnegative/binary matrix factorization with a D-Wave quantum annealer. CoRR abs/1704.01605 (2017)
Coauthor Index
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