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2020 – today
- 2024
[j14]Rogia Kpanou, Patrick Dallaire, Elsa Rousseau, Jacques Corbeil:
Learning self-supervised molecular representations for drug-drug interaction prediction. BMC Bioinform. 25(1): 47 (2024)- 2023
- [c9]Mazid Abiodoun Osseni, Prudencio Tossou, François Laviolette, Jacques Corbeil:
MOT: A Multi-Omics Transformer for Multiclass Classification Tumour Types Predictions. BIOINFORMATICS 2023: 252-261 - [c8]Baptiste Bauvin, Cécile Capponi, Florence Clerc, Pascal Germain, Sokol Koço, Jacques Corbeil:
Sample Boosting Algorithm (SamBA) - An interpretable greedy ensemble classifier based on local expertise for fat data. UAI 2023: 130-140 - [i7]Thibaud Godon, Baptiste Bauvin, Pascal Germain, Jacques Corbeil, Alexandre Drouin:
Invariant Causal Set Covering Machines. CoRR abs/2306.04777 (2023) - 2022
- [c7]Baptiste Bauvin, Jacques Corbeil, Dominique Benielli, Sokol Koço, Cécile Capponi:
Integrating and reporting full multi-view supervised learning experiments using SuMMIT. LIDTA 2022: 139-150 - [i6]Thibaud Godon, Pier-Luc Plante, Baptiste Bauvin, Elina Francovic-Fontaine, Alexandre Drouin, Jacques Corbeil:
RandomSCM: interpretable ensembles of sparse classifiers tailored for omics data. CoRR abs/2208.06436 (2022) - 2021
- [j13]Rogia Kpanou, Mazid Abiodoun Osseni, Prudencio Tossou, François Laviolette, Jacques Corbeil
:
On the robustness of generalization of drug-drug interaction models. BMC Bioinform. 22(1): 477 (2021) - [j12]Caroline Sirois, Richard Khoury, Audrey Durand, Pierre-Luc Déziel, Olga Bukhtiyarova, Yohann Chiu, Denis Talbot, Alexandre Bureau, Philippe Després, Christian Gagné, François Laviolette, Anne-Marie Savard, Jacques Corbeil, Thierry Badard, Sonia Jean, Marc Simard:
Exploring polypharmacy with artificial intelligence: data analysis protocol. BMC Medical Informatics Decis. Mak. 21(1): 219 (2021) - [c6]Mazid Abiodoun Osseni, Prudencio Tossou, Jacques Corbeil, François Laviolette:
Applying PySCMGroup to Breast Cancer Biomarkers Discovery. BIOINFORMATICS 2021: 72-82 - [c5]SeyedSina Hosseini, Partha Sarati Das, Gabriel Gagnon-Turcotte, P. BL-George, Younès Messaddeq, Jacques Corbeil, Benoit Gosselin:
Optimization & Characterization of Interdigitated Electrodes for Microbial Growth Monitoring. EMBC 2021: 1226-1229 - 2020
- [c4]Partha Sarati Das, Gabriel Gagnon-Turcotte, Karim Ouazaa, Karim Bouzid, SeyedSina Hosseini, Eric Bharucha, Denise M. Tremblay, Sylvain Moineau, Younès Messaddeq, Jacques Corbeil, Benoit Gosselin:
The EcoChip 2: An Autonomous Sensor Platform for Multimodal Bio-environmental Monitoring of the Northern Habitat. EMBC 2020: 4101-4104
2010 – 2019
- 2018
- [j11]Matthieu Sylvain, Francis Lehoux, Steeve Morency, Felix Faucher, Eric Bharucha, Denise M. Tremblay, Frédéric Raymond, Denis Sarrazin, Sylvain Moineau, Michel Allard, Jacques Corbeil, Younès Messaddeq, Benoit Gosselin:
The EcoChip: A Wireless Multi-Sensor Platform for Comprehensive Environmental Monitoring. IEEE Trans. Biomed. Circuits Syst. 12(6): 1289-1300 (2018) - [c3]Matthieu Sylvain, Francis Lehoux, Steeve Morency, Felix Faucher, Eric Bharucha, Denise M. Tremblay, Denis Sarrazin, Sylvain Moineau, Michel Allard, Jacques Corbeil, Younès Messaddeq, Benoit Gosselin:
The EcoChip: A Wireless Multi-Sensor Platform for Comprehensive Environmental Monitoring. ISCAS 2018: 1-5 - 2016
- [c2]Maxime Déraspe, Kalpana Karra, Gail Binkley, Julie M. Sullivan, Gos Micklem, Jacques Corbeil, J. Michael Cherry, Michel Dumontier:
Semantic Research Platform for Model Organisms. BMDID@ISWC 2016 - [c1]Maxime Déraspe, Gail Binkley, Daniela Butano, Matthew Chadwick, J. Michael Cherry, Justin Clark-Casey, Sergio Contrino, Jacques Corbeil, Joshua Heimbach, Kalpana Karra, Rachel Lyne, Julie M. Sullivan, Yo Yehudi, Gos Micklem, Michel Dumontier:
Making Linked Data SPARQL with the InterMine Biological Data Warehouse. SWAT4LS 2016 - [i5]Alexandre Drouin, Frédéric Raymond, Gaël Letarte St-Pierre, Mario Marchand, Jacques Corbeil, François Laviolette:
Large scale modeling of antimicrobial resistance with interpretable classifiers. CoRR abs/1612.01030 (2016) - 2015
- [j10]Sébastien Giguère, François Laviolette, Mario Marchand, Denise M. Tremblay, Sylvain Moineau, Xinxia Liang, Éric Biron, Jacques Corbeil:
Machine Learning Assisted Design of Highly Active Peptides for Drug Discovery. PLoS Comput. Biol. 11(4) (2015) - [i4]Alexandre Drouin, Sébastien Giguère, Maxime Déraspe, François Laviolette, Mario Marchand, Jacques Corbeil:
Greedy Biomarker Discovery in the Genome with Applications to Antimicrobial Resistance. CoRR abs/1505.06249 (2015) - 2014
- [i3]Alexandre Drouin, Sébastien Giguère, Vladana Sagatovich, Maxime Déraspe, François Laviolette, Mario Marchand, Jacques Corbeil:
Learning interpretable models of phenotypes from whole genome sequences with the Set Covering Machine. CoRR abs/1412.1074 (2014) - 2013
- [j9]Élénie Godzaridis, Sébastien Boisvert, Fangfang Xia, Mikhail Kandel, Steve Behling, Bill Long, Carlos P. Sosa, François Laviolette, Jacques Corbeil:
Human Analysts at Superhuman Scales: What Has Friendly Software To Do? Big Data 1(4): 227-236 (2013) - [j8]Sébastien Giguère, Mario Marchand, François Laviolette, Alexandre Drouin, Jacques Corbeil:
Learning a peptide-protein binding affinity predictor with kernel ridge regression. BMC Bioinform. 14: 82 (2013) - 2012
- [j7]Marc-Alexandre Nolin, Michel Dumontier, François Belleau, Jacques Corbeil:
Building an HIV data mashup using Bio2RDF. Briefings Bioinform. 13(1): 98-106 (2012) - [j6]Mohak Shah, Mario Marchand, Jacques Corbeil:
Feature Selection with Conjunctions of Decision Stumps and Learning from Microarray Data. IEEE Trans. Pattern Anal. Mach. Intell. 34(1): 174-186 (2012) - [i2]Sébastien Giguère, Mario Marchand, François Laviolette, Alexandre Drouin, Jacques Corbeil:
Learning a peptide-protein binding affinity predictor with kernel ridge regression. CoRR abs/1207.7253 (2012) - 2011
- [j5]Mohak Shah, Jacques Corbeil:
A General Framework for Analyzing Data from Two Short Time-Series Microarray Experiments. IEEE ACM Trans. Comput. Biol. Bioinform. 8(1): 14-26 (2011) - 2010
- [j4]Sébastien Boisvert, François Laviolette, Jacques Corbeil:
Ray: Simultaneous Assembly of Reads from a Mix of High-Throughput Sequencing Technologies. J. Comput. Biol. 17(11): 1519-1533 (2010) - [i1]Mohak Shah, Mario Marchand, Jacques Corbeil:
Feature Selection with Conjunctions of Decision Stumps and Learning from Microarray Data. CoRR abs/1005.0530 (2010)
2000 – 2009
- 2003
- [j3]J. Lynn Fink, Scott Drewes, Hiren Patel, John B. Welsh, Daniel R. Masys, Jacques Corbeil, Michael Gribskov:
2HAPI: A Microarray Data Analysis System. Bioinform. 19(11): 1443-1445 (2003) - 2002
- [j2]Roman Sásik, E. Calvo, Jacques Corbeil:
Statistical analysis of high-density oligonucleotide arrays: a multiplicative noise model. Bioinform. 18(12): 1633-1640 (2002) - 2001
- [j1]Daniel R. Masys, John B. Welsh, J. Lynn Fink, Michael Gribskov, Igor Klacansky, Jacques Corbeil:
Use of keyword hierarchies to interpret gene expression patterns. Bioinform. 17(4): 319-326 (2001)
Coauthor Index
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