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Journal Articles
- 2021
[j7]Óscar Lapuente-Santana, Maisa van Genderen, Peter A. J. Hilbers, Francesca Finotello
, Federica Eduati:
Interpretable systems biomarkers predict response to immune-checkpoint inhibitors. Patterns 2(8): 100293 (2021)- 2016
- [j6]Barbara Di Camillo, Azzurra Carlon, Federica Eduati, Gianna Maria Toffolo:
A rule-based model of insulin signalling pathway. BMC Syst. Biol. 10: 38 (2016) - 2015
- [j5]Santiago Videla, Carito Guziolowski, Federica Eduati, Sven Thiele, Martin Gebser, Jacques Nicolas, Julio Saez-Rodriguez, Torsten Schaub, Anne Siegel:
Learning Boolean logic models of signaling networks with ASP. Theor. Comput. Sci. 599: 79-101 (2015) - 2014
- [j4]Carito Guziolowski, Santiago Videla, Federica Eduati, Sven Thiele, Thomas Cokelaer, Anne Siegel, Julio Saez-Rodriguez:
Exhaustively characterizing feasible logic models of a signaling network using Answer Set Programming. Bioinform. 30(13): 1942 (2014) - 2013
- [j3]Carito Guziolowski, Santiago Videla, Federica Eduati, Sven Thiele, Thomas Cokelaer, Anne Siegel, Julio Saez-Rodriguez:
Exhaustively characterizing feasible logic models of a signaling network using Answer Set Programming. Bioinform. 29(18): 2320-2326 (2013) - 2012
- [j2]Federica Eduati, Javier De Las Rivas, Barbara Di Camillo, Gianna Toffolo, Julio Saez-Rodriguez:
Integrating literature-constrained and data-driven inference of signalling networks. Bioinform. 28(18): 2311-2317 (2012) - [j1]Federica Eduati, Barbara Di Camillo, Michael Karbiener, Marcel Scheideler, Davide Corà, Michele Caselle, Gianna Toffolo:
Dynamic Modeling of miRNA-mediated Feed-Forward Loops. J. Comput. Biol. 19(2): 188-199 (2012)
Conference and Workshop Papers
- 2023
- [c2]Catarina Dinis Fernandes, Annekoos Schaap, Joan Kant, Petra J. van Houdt, Hessel Wijkstra, Uulke A. van der Heide, Wilbert Zwart, Massimo Mischi, Federica Eduati, Simona Turco:
Prostate cancer risk assessment using a radiogenomic analysis. MeMeA 2023: 1-6 - 2012
- [c1]Santiago Videla, Carito Guziolowski, Federica Eduati, Sven Thiele, Niels Grabe, Julio Saez-Rodriguez, Anne Siegel:
Revisiting the Training of Logic Models of Protein Signaling Networks with ASP. CMSB 2012: 342-361
Informal and Other Publications
- 2015
- [i2]Thomas Cokelaer, Mukesh Bansal, Christopher Bare, Erhan Bilal, Brian M. Bot, Elias Chaibub Neto, Federica Eduati, Mehmet Gönen, Steven M. Hill, Bruce R. Hoff, Jonathan R. Karr, Robert Küffner, Michael P. Menden, Pablo Meyer, Raquel Norel, Abhishek Pratap, Robert J. Prill, Matthew T. Weirauch, James C. Costello, Gustavo Stolovitzky, Julio Saez-Rodriguez:
DREAMTools: a Python package for scoring collaborative challenges. F1000Research 4: 1030 (2015) - 2012
- [i1]Santiago Videla, Carito Guziolowski, Federica Eduati, Sven Thiele, Niels Grabe, Julio Saez-Rodriguez, Anne Siegel:
Revisiting the Training of Logic Models of Protein Signaling Networks with a Formal Approach based on Answer Set Programming. CoRR abs/1210.0690 (2012)
Coauthor Index
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