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ORCIDAndrew E. Teschendorff
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2020 – today
- 2022
[j29]Feng Xu
, Yifan Wang, Yunchao Ling, Chenfen Zhou, Haizhou Wang, Andrew E. Teschendorff, Yi Zhao, Haitao Zhao, Yungang He, Guoqing Zhang, Zhen Yang:
dbDEMC 3.0: Functional Exploration of Differentially Expressed miRNAs in Cancers of Human and Model Organisms. Genom. Proteom. Bioinform. 20(3): 446-454 (2022)- [j28]Yongbiao Xue, Yiming Bao, Zhang Zhang, Wenming Zhao, Jing-Fa Xiao, Shunmin He, Guoqing Zhang, Yixue Li, Guoping Zhao, Runsheng Chen, Jingyao Zeng, Yadong Zhang, Yunfei Shang, Jialin Mai, Shuo Shi, Mingming Lu, Congfan Bu, Zhewen Zhang, Zhenglin Du, Yinying Wang, Hongen Kang, Tianyi Xu, Lili Hao, Peilin Jia, Shuai Jiang, Qiheng Qian, Tongtong Zhu, Wenting Zong, Tong Jin, Yuansheng Zhang, Dong Zou, Qiang Du, Changrui Feng, Lina Ma, Sisi Zhang, Anke Wang, Lili Dong, Yanqing Wang, Wan Liu, Xing Yan, Yunchao Ling, Zhihua Zhou, Wang Kang, Tao Zhang, Shuai Ma, Haoteng Yan, Zunpeng Liu, Zejun Ji, Yusheng Cai, Si Wang, Moshi Song, Jie Ren, Qi Zhou, Jing Qu, Weiqi Zhang, Guanghui Liu, Xu Chen, Tingting Chen, Yanling Sun, Caixia Yu, Bixia Tang, Junwei Zhu, Shuang Zhai, Yubin Sun, Qiancheng Chen, Xiaoyu Yang, Xin Zhang, Zhengqi Sang, Yonggang Wang, Yilin Zhao, Huanxin Chen, Li Lan, Yingke Ma, Yaokai Jia, Xinchang Zheng, Meili Chen, Ming Chen, Guangyi Niu, Rong Pan, Wei Jing, Jian Sang, Chang Liu, Yujia Xiong, Mochen Zhang, Guoliang Wang, Lizhi Yi, Wei Zhao, Song Wu, Zhuang Xiong, Rujiao Li, Zheng Gong, Lin Liu, Zhao Li, Qianpeng Li, Sicheng Luo, Jiajia Wang, Yirong Shi, Honghong Zhou, Peng Zhang, Tingrui Song, Yanyan Li, Fei Yang, Mengwei Li, Zhaohua Li, Dongmei Tian, Xiaonan Liu, Cuiping Li, Xufei Teng, Shuhui Song, Yang Zhang, Ruru Chen, Rongqin Zhang, Feng Xu, Yifan Wang, Chenfen Zhou, Haizhou Wang, Andrew E. Teschendorff, Yungang He, Zhen Yang, Lun Li, Na Li, Ying Cui, Guangya Duan, Gangao Wu, Tianhao Huang, Enhui Jin, Hailong Kang, Zhonghuang Wang, Hua Chen, Mingkun Li, Wanshan Ning, Yu Xue, Yanhu Liu, Qijun Zhou, Xingyan Liu, Longlong Zhang, Bingyu Mao, Shihua Zhang, Yaping Zhang, Guodong Wang, Qianghui Zhu, Xin Li, Menghua Li, Yuanming Liu, Hong Luo, Xiaoyuan Wu, Haichun Jing, Yitong Pan, Leisheng Shi, Zhixiang Zuo, Jian Ren, Xinxin Zhang, Yun Xiao, Xia Li, Dan Liu, Chi Zhang, Zheng Zhao, Tao Jiang, Wanying Wu, Fangqing Zhao, Xianwen Meng, Di Peng, Hao Luo, Feng Gao, Shaofeng Lin, Chuijie Liu, Anyuan Guo, Hao Yuan, Tianhan Su, Yong E. Zhang, Yincong Zhou, Guoji Guo, Shanshan Fu, Xiaodan Tan, Weizhi Zhang, Mei Luo, Yubin Xie, Chenwei Wang, Xingyu Liao, Xin Gao, Jianxin Wang, Guiyan Xie, Chunhui Yuan, Feng Tian, Dechang Yang, Ge Gao, Dachao Tang, Wenyi Wu, Yujie Gou, Cheng Han, Qinghua Cui, Xiangshang Li, Chuan-Yun Li, Xiaotong Luo:
Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022. Nucleic Acids Res. 50(D1): 27-38 (2022) - 2021
- [j27]Andrew E. Teschendorff, Alok K. Maity, Xue Hu, Weiyan Chen, Matthias Lechner:
Ultra-fast scalable estimation of single-cell differentiation potency from scRNA-Seq data. Bioinform. 37(11): 1528-1534 (2021) - 2020
- [j26]Jifan Shi, Andrew E. Teschendorff, Weiyan Chen, Luonan Chen, Tiejun Li:
Quantifying Waddington's epigenetic landscape: a comparison of single-cell potency measures. Briefings Bioinform. 21(1): 248-261 (2020) - [j25]Shijie C. Zheng, Charles E. Breeze, Stephan Beck, Danyue Dong, Tianyu Zhu, Liang-Xiao Ma, Wei Ye, Guoqing Zhang, Andrew E. Teschendorff:
EpiDISH web server: Epigenetic Dissection of Intra-Sample-Heterogeneity with online GUI. Bioinform. 36(6): 1950-1951 (2020)
2010 – 2019
- 2019
- [j24]Ya Wang, Andrew E. Teschendorff, Martin Widschwendter, Shuang Wang:
Accounting for differential variability in detecting differentially methylated regions. Briefings Bioinform. 20(1): 47-57 (2019) - [j23]Danyue Dong, Yuan Tian, Shijie C. Zheng, Andrew E. Teschendorff:
ebGSEA: an improved Gene Set Enrichment Analysis method for Epigenome-Wide-Association Studies. Bioinform. 35(18): 3514-3516 (2019) - [j22]Charles E. Breeze, Alex P. Reynolds, Jenny van Dongen, Ian Dunham, John Lazar, Shane J. Neph, Jeff Vierstra, Guillaume Bourque, Andrew E. Teschendorff, John A. Stamatoyannopoulos, Stephan Beck:
eFORGE v2.0: updated analysis of cell type-specific signal in epigenomic data. Bioinform. 35(22): 4767-4769 (2019) - 2018
- [j21]Wei Tang, Shixiang Wan, Zhen Yang, Andrew E. Teschendorff, Quan Zou:
Tumor origin detection with tissue-specific miRNA and DNA methylation markers. Bioinform. 34(3): 398-406 (2018) - 2017
- [j20]Yuan Tian, Tiffany J. Morris, Amy P. Webster, Zhen Yang, Stephan Beck, Andrew Feber, Andrew E. Teschendorff:
ChAMP: updated methylation analysis pipeline for Illumina BeadChips. Bioinform. 33(24): 3982-3984 (2017) - [j19]Andrew E. Teschendorff, Charles E. Breeze, Shijie C. Zheng, Stephan Beck:
A comparison of reference-based algorithms for correcting cell-type heterogeneity in Epigenome-Wide Association Studies. BMC Bioinform. 18(1): 105:1-105:14 (2017) - [j18]Zhen Yang, Liangcai Wu, Anqiang Wang, Wei Tang, Yi Zhao, Haitao Zhao, Andrew E. Teschendorff:
dbDEMC 2.0: updated database of differentially expressed miRNAs in human cancers. Nucleic Acids Res. 45(Database-Issue): D812-D818 (2017) - 2016
- [j17]Andrew E. Teschendorff, Allison Jones, Martin Widschwendter:
Stochastic epigenetic outliers can define field defects in cancer. BMC Bioinform. 17: 178 (2016) - [c4]Emilie Renard, Andrew E. Teschendorff, Pierre-Antoine Absil:
Spatiotemporal ICA improves the selection of differentially expressed genes. ESANN 2016 - 2015
- [j16]Zhanyu Ma, Andrew E. Teschendorff, Arne Leijon, Yuanyuan Qiao, Honggang Zhang, Jun Guo:
Variational Bayesian Matrix Factorization for Bounded Support Data. IEEE Trans. Pattern Anal. Mach. Intell. 37(4): 876-889 (2015) - [j15]Christopher R. S. Banerji, Simone Severini, Carlos Caldas, Andrew E. Teschendorff:
Intra-Tumour Signalling Entropy Determines Clinical Outcome in Breast and Lung Cancer. PLoS Comput. Biol. 11(3) (2015) - 2014
- [j14]Tiffany J. Morris, Lee M. Butcher, Andrew Feber, Andrew E. Teschendorff, Ankur R. Chakravarthy, Tomasz K. Wojdacz, Stephan Beck:
ChAMP: 450k Chip Analysis Methylation Pipeline. Bioinform. 30(3): 428-430 (2014) - [j13]Yinming Jiao, Martin Widschwendter, Andrew E. Teschendorff:
A systems-level integrative framework for genome-wide DNA methylation and gene expression data identifies differential gene expression modules under epigenetic control. Bioinform. 30(16): 2360-2366 (2014) - [j12]David Gomez-Cabrero, Imad Abugessaisa, Dieter Maier, Andrew E. Teschendorff, Matthias Merkenschlager, Andreas Gisel, Esteban Ballestar, Erik Bongcam-Rudloff, Ana Conesa, Jesper Tegnér:
Data integration in the era of omics: current and future challenges. BMC Syst. Biol. 8(S-2): I1 (2014) - [j11]Andrew E. Teschendorff, Xiaoping Liu, Helena Carén, Steve M. Pollard, Stephan Beck, Martin Widschwendter, Luonan Chen:
The Dynamics of DNA Methylation Covariation Patterns in Carcinogenesis. PLoS Comput. Biol. 10(7) (2014) - [c3]Emilie Renard, Andrew E. Teschendorff, Pierre-Antoine Absil:
Capturing confounding sources of variation in DNA methylation data by spatiotemporal independent component analysis. ESANN 2014 - 2013
- [j10]Andrew E. Teschendorff, Francesco Marabita, Matthias Lechner, Thomas E. Bartlett, Jesper Tegnér, David Gomez-Cabrero, Stephan Beck:
A beta-mixture quantile normalization method for correcting probe design bias in Illumina Infinium 450 k DNA methylation data. Bioinform. 29(2): 189-196 (2013) - [j9]Zhanyu Ma, Andrew E. Teschendorff:
A variational Bayes beta Mixture Model for Feature Selection in DNA methylation Studies. J. Bioinform. Comput. Biol. 11(4) (2013) - 2012
- [j8]Andrew E. Teschendorff, Martin Widschwendter:
Differential variability improves the identification of cancer risk markers in DNA methylation studies profiling precursor cancer lesions. Bioinform. 28(11): 1487-1494 (2012) - [j7]Joanna Zhuang, Martin Widschwendter, Andrew E. Teschendorff:
A comparison of feature selection and classification methods in DNA methylation studies using the Illumina Infinium platform. BMC Bioinform. 13: 59 (2012) - 2011
- [j6]Andrew E. Teschendorff, Joanna Zhuang, Martin Widschwendter:
Independent surrogate variable analysis to deconvolve confounding factors in large-scale microarray profiling studies. Bioinform. 27(11): 1496-1505 (2011) - [j5]Yan Jiao, Katherine Lawler, Gargi S. Patel, Arnie Purushotham, Annete F. Jones, Anita Grigoriadis, Andrew Tutt, Tony C. Ng, Andrew E. Teschendorff:
DART: Denoising Algorithm based on Relevance network Topology improves molecular pathway activity inference. BMC Bioinform. 12: 403 (2011) - 2010
- [j4]Andrew E. Teschendorff, Simone Severini:
Increased entropy of signal transduction in the cancer metastasis phenotype. BMC Syst. Biol. 4: 104 (2010)
2000 – 2009
- 2009
- [c2]Matthieu Sainlez, Pierre-Antoine Absil, Andrew E. Teschendorff:
Gene expression data analysis using spatiotemporal blind source separation. ESANN 2009 - 2007
- [j3]Andrew E. Teschendorff, Michel Journée, Pierre-Antoine Absil, Rodolphe Sepulchre, Carlos Caldas:
Elucidating the Altered Transcriptional Programs in Breast Cancer using Independent Component Analysis. PLoS Comput. Biol. 3(8) (2007) - [c1]Michel Journée, Andrew E. Teschendorff, Pierre-Antoine Absil, Rodolphe Sepulchre:
Geometric Optimization Methods for Independent Component Analysis Applied on Gene Expression Data. ICASSP (4) 2007: 1413-1416 - 2006
- [j2]Andrew E. Teschendorff, Ali Naderi, Nuno L. Barbosa-Morais, Carlos Caldas:
PACK: Profile Analysis using Clustering and Kurtosis to find molecular classifiers in cancer. Bioinform. 22(18): 2269-2275 (2006) - 2005
- [j1]Andrew E. Teschendorff, Yanzhong Wang, Nuno L. Barbosa-Morais, James D. Brenton, Carlos Caldas:
A variational Bayesian mixture modelling framework for cluster analysis of gene-expression data. Bioinform. 21(13): 3025-3033 (2005)
Coauthor Index
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