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2020 – today
- 2024
[j7]Naima Vahab, Tarun Bonu, Levin Kuhlmann
, Mirana Ramialison, Sonika Tyagi:
Uncovering co-regulatory modules and gene regulatory networks in the heart through machine learning-based analysis of large-scale epigenomic data. Comput. Biol. Medicine 171: 108068 (2024)- 2023
- [j6]Yashpal Ramakrishnaiah, Nenad Macesic, Geoffrey I. Webb, Anton Y. Peleg, Sonika Tyagi:
EHR-QC: A streamlined pipeline for automated electronic health records standardisation and preprocessing to predict clinical outcomes. J. Biomed. Informatics 147: 104509 (2023) - 2021
- [j5]Tyrone Chen, Melcy Philip, Kim-Anh Lê Cao, Sonika Tyagi:
A multi-modal data harmonisation approach for discovery of COVID-19 drug targets. Briefings Bioinform. 22(6) (2021) - [i4]Tyrone Chen, Al J. Abadi, Kim-Anh Lê Cao, Sonika Tyagi:
multiomics: A user-friendly multi-omics data harmonisation R pipeline. F1000Research 10: 538 (2021) - 2020
- [j4]Yashpal Ramakrishnaiah, Levin Kuhlmann, Sonika Tyagi:
Towards a comprehensive pipeline to identify and functionally annotate long noncoding RNA (lncRNA). Comput. Biol. Medicine 127: 104028 (2020)
2010 – 2019
- 2019
- [j3]Maria Victoria Schneider, Philippa C. Griffin, Sonika Tyagi, Madison Flannery, Saravanan Dayalan, Simon Gladman, Nathan S. Watson-Haigh, Philipp E. Bayer, Michael A. Charleston, Ira Cooke, Rob Cook, Richard J. Edwards, David Edwards, Dominique Gorse, Malcolm J. McConville, David Powell, Marc R. Wilkins, Andrew Lonie:
Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia. Briefings Bioinform. 20(2): 384-389 (2019) - [i3]John D. Van Horn, Sumiko Abe, José Luis Ambite, Teresa K. Attwood, Niall Beard, Louisa Bellis, Avnish Bhattrai, Alex A. T. Bui, Gully Burns, Lily Fierro, Jonathan Gordon, Jeffrey S. Grethe, Jeana Kamdar, Xiaoyu Lei, Kristina Lerman, Annette McGrath, Nicola J. Mulder, Caroline O'Driscoll, Crystal Stewart, Sonika Tyagi:
Advancing the international data science workforce through shared training and education. F1000Research 8: 251 (2019) - 2017
- [j2]Nathan S. Watson-Haigh, Jerico Nico De Leon Revote, Radoslaw Suchecki, Sonika Tyagi, Susan M. Corley, Catherine A. Shang, Annette McGrath:
Towards an open, collaborative, reusable framework for sharing hands-on bioinformatics training workshops. Briefings Bioinform. 18(2): 348-355 (2017) - [i2]Rafael C. Jiménez, Mateusz Kuzak, Monther Alhamdoosh, Michelle Barker, Bérénice Batut, Mikael Borg, Salvador Capella-Gutiérrez, Neil P. Chue Hong, Martin Cook, Manuel Corpas, Madison Flannery, Leyla J. García, Josep Lluis Gelpí, Simon L. Gladman, Carole A. Goble, Montserrat González Ferreiro, Alejandra N. González-Beltrán, Philippa C. Griffin, Björn A. Grüning, Jonas Hagberg, Petr Holub, Rob W. W. Hooft, Jon C. Ison, Daniel S. Katz, Brane Leskosek, Federico López-Gómez, Luis J. Oliveira, David Mellor, Rowland Mosbergen, Nicola J. Mulder, Yasset Pérez-Riverol, Robert Pergl, Horst Pichler, Bernard J. Pope, Ferran Sanz, Maria Victoria Schneider, Victoria Stodden, Radoslaw Suchecki, Radka Svobodová Vareková, Harry-Anton Talvik, Ilian T. Todorov, Andrew E. Treloar, Sonika Tyagi, Maarten van Gompel, Daniel Vaughan, Allegra Via, Xiaochuan Wang, Nathan S. Watson-Haigh, Steve Crouch:
Four simple recommendations to encourage best practices in research software. F1000Research 6: 876- (2017) - [i1]Philippa C. Griffin, Jyoti Khadake, Kate S. LeMay, Suzanna E. Lewis, Sandra E. Orchard, Andrew Pask, Bernard J. Pope, Ute Roessner, Keith Russell, Torsten Seemann, Andrew E. Treloar, Sonika Tyagi, Jeffrey H. Christiansen, Saravanan Dayalan, Simon Gladman, Sandra B. Hangartner, Helen L. Hayden, William W. H. Ho, Gabriel Keeble-Gagnère, Pasi K. Korhonen, Peter Neish, Priscilla R. Prestes, Mark F. Richardson, Nathan S. Watson-Haigh, Kelly L. Wyres, Neil D. Young, Maria Victoria Schneider:
Best practice data life cycle approaches for the life sciences. F1000Research 6: 1618- (2017) - 2013
- [j1]Nathan S. Watson-Haigh, Catherine A. Shang, Matthias Haimel, Myrto Kostadima, Remco Loos, Nandan Deshpande, Konsta Duesing, Xi Li, Annette McGrath, Sean McWilliam, Simon Michnowicz, Paula Moolhuijzen, Steve Quenette, Jerico Nico De Leon Revote, Sonika Tyagi, Maria Victoria Schneider:
Next-generation sequencing: a challenge to meet the increasing demand for training workshops in Australia. Briefings Bioinform. 14(5): 563-574 (2013)
Coauthor Index
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