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BioData Mining, Volume 3
Volume 3, 2010
- Georgios A. Pavlopoulos
, Theodoros G. Soldatos
, Adriano Barbosa-Silva
, Reinhard Schneider:
A reference guide for tree analysis and visualization. 1 - Fenghai Duan, Mark A. Pauley, Eliot R. Spindel, Li Zhang, Robert B. Norgren
:
Large scale analysis of positional effects of single-base mismatches on microarray gene expression data. 2 - Rex T. Nelson, Shulamit Avraham, Randy C. Shoemaker, Gregory D. May, Doreen Ware, Damian Gessler:
Applications and methods utilizing the Simple Semantic Web Architecture and Protocol (SSWAP) for bioinformatics resource discovery and disparate data and service integration. 3 - Stefan Enroth
, Robin Andersson
, Claes Wadelius, Jan Komorowski
:
SICTIN: Rapid footprinting of massively parallel sequencing data. 4 - Stephen D. Turner, Scott M. Dudek, Marylyn D. Ritchie:
ATHENA: A knowledge-based hybrid backpropagation-grammatical evolution neural network algorithm for discovering epistasis among quantitative trait Loci. 5 - Kazuharu Misawa
, Reiko F. Kikuno:
GeneWaltz-A new method for reducing the false positives of gene finding. 6 - Abhay Sharma
:
Transcriptome bioinformatic analysis identifies potential therapeutic mechanism of pentylenetetrazole in down syndrome. 7 - Alison A. Motsinger-Reif
, Sushamna Deodhar, Stacey J. Winham
, Nicholas E. Hardison:
Grammatical evolution decision trees for detecting gene-gene interactions. 8 - Chengwei Lei, Jianhua Ruan
:
A particle swarm optimization-based algorithm for finding gapped motifs. 9 - Sarah A. Pendergrass
, Scott M. Dudek, Dana C. Crawford
, Marylyn D. Ritchie:
Synthesis-View: visualization and interpretation of SNP association results for multi-cohort, multi-phenotype data and meta-analysis. 10 - Derrick K. Rollins, AiLing Teh:
An extended data mining method for identifying differentially expressed assay-specific signatures in functional genomic studies. 11

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