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ORCIDICBO 2023: Brasília, Brazil
- Fernanda Farinelli, Amanda Damasceno de Souza, Eduardo Ribeiro Felipe:
Proceedings of the International Conference on Biomedical Ontologies 2023 together with the Workshop on Ontologies for Infectious and Immune-Mediated Disease Data Science (OIIDDS 2023) and the FAIR Ontology Harmonization and TRUST Data Interoperability Workshop (FOHTI 2023), Brasília, Brazil, August 28 - September 1, 2023. CEUR Workshop Proceedings 3603, CEUR-WS.org 2023
Full Papers
- Anthony Huffman, Edison Ong, Timothy Brunson, Nasim Sanati, Jie Zheng, Anna Maria Masci, Guanming Wu, Yongqun He:
Ontology-based Representation and Analysis of Conditional Vaccine Immune Responses Using Omics Data. 1-12 - Sumyyah Toonsi, Senay Kafkas, Robert Hoehndorf:
Exploring the Use of Ontology Components for Distantly-Supervised Disease and Phenotype Named Entity Recognition. 13-24 - Michael Rabenberg, Anuwat Pengput, Werner Ceusters:
An Extendible Realism-Based Ontology for Kinship. 25-35 - Stefan Schulz, Warren Del-Pinto, Lifeng Han, Markus Kreuzthaler, Sareh Aghaei Dinani, Goran Nenadic:
Towards Principles of Ontology-Based Annotation of Clinical Narratives. 36-47 - Cindy Acuña, Yasmine Anchén, Edelweis Rohrer, Regina Motz:
An Ontology for Mammography Screening Recommendation. 48-59 - Amanda Damasceno de Souza, Fernanda Farinelli, Eduardo Ribeiro Felipe, Armando Sérgio de Aguiar Filho, Mauricio Barcellos Almeida:
An Application of Natural Language Processing and Ontologies to Electronic Healthcare Records in the Field of Gynecology. 60-69 - Enrique Wulff:
The Potential of Ontologies for the Empirical Assessment of Machine Learning Techniques in Operational Oceanography. 70-81 - Christian Kindermann, Martin Georg Skjæveland:
Concrete Names for Complex Expressions in Ontologies: A Survey of Biomedical Ontologies. 82-93 - Sahil, P. Sreenivasa Kumar:
Leveraging Biomedical Ontologies to Boost Performance of BERT-Based Models for Answering Medical MCQs. 94-105 - Cilenir Carla de Carvalho, Andreia Soprani dos Santos, Silvia das Dores Rissino, Susana Bubach, Maria das Graças da Silva Teixeira:
The OntoWoH Ontology - a Women's Health Reference Ontology Detailing the Fragment of Climacteric and Menopause. 106-117 - Pratik Devkota, Somya D. Mohanty, Prashanti Manda:
Using Ontology Embeddings With Deep Learning Architectures to Improve Prediction of Ontology Concepts From Literature. 118-129 - Jean Noël Nikiema, Fleur Mougin
, Vianney Jouhet, Stefan Schulz:
KOSonto: an Ontology for Knowledge Organization Systems, Their Constituents, and Their Referents. 130-141 - Areej Muhajab, Alia I. Abdelmoty, Athanasios Hassoulas:
Reuse and Enrichment for Building an Ontology for Obsessive-Compulsive Disorder. 142-153 - Paul Fabry, Adrien Barton, Jean-François Ethier:
Version Control for Interdependent Ontologies: Challenges and First Propositions. 154-165
Short Papers
- S. Clint Dowland, Melody L. Greer, Sudeepa Bhattacharyya, Mathias Brochhausen:
Ontology-based Integration of Consumer Data and EHR Systems to Fill Gaps in Social Determinants of Health Data. 166-172 - Peter Koch, Barry Smith:
Beyond the Goods-Service Continuum. 173-178
Poster Abstracts
- César Henrique Bernabé, Annika Jacobsen, Luiz Olavo Bonino da Silva Santos, Marco Roos:
A Method to Facilitate the Identification of FAIRification Objectives. 179 - Josina da Silva Vieira, Letícia Santos de Jesus, Tainá Batista de Assis:
Taxonomy Proposal for Controlled Vocabulary Planning in the Pinakes Catalogue With Tematres. 180 - Tiago Lubiana:
The Interplay of Wikidata and the Cell Ontology. 181 - Madeline Iseminger, Muhammad Zohaib Anwar, Rhiannon Cameron, Damion M. Dooley, Paul Gordon, Emma J. Griffiths, Anoosha Sehar, Khushi Vora, William Hsiao:
Tracking the Functional Effects of SARS-CoV-2 Genomic Variants: an Ontology-Driven Approach. 182-183
Workshop on Ontologies for Infectious and Immune-Mediated Disease Data Science (OIIDDS 2023)
- Giacomo De Colle, Ali Hasanzadeh, John Beverley:
Ontology Development Strategies and the Infectious Disease Ontology Ecosystem. 184-192 - Evellin Cardoso:
Integrating Declarative and Procedural Knowledge in Infectious Disease Scenario for Epidemiological Monitoring. 193-198 - Emily Steliotes, Daniela Barile, Matthew Lange:
Multi-Ontology framework of Maternal Milk for Immune Systems (MOMMIS). 199-203
Workshop on FAIR Ontology Harmonization and trust Data Interoperability (FOHTI 2023)
- Avetis Mkrtchian, Petr Kremen:
An Interactive Dashboard for Ontology Quality Monitoring. 204-210
Tutorials Abstracts
- Senay Kafkas, Sumyyah Toonsi, Sakhaa Alsaedi:
Natural Language Processing Tutorial for Biomedical Text Mining. 211 - Maurício B. Almeida, Jeanne Louize Emygdio:
BFO as a Top-Level Ontology for Information Systems Modeling. 212 - Giancarlo Guizzardi:
Ontology-Driven Conceptual Modeling with UFO, gUFO, and OntoUML. 213
Software Demo Abstract
- Brian S. Alper, Khalid Shahin, Joanne Dehnbostel, Cauê F. Monaco:
Ontology Development in FHIR Resources with the Fast Evidence Interoperability Resources (FEvIR) Platform. 214
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