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DIMACS Workshop: Mathematical Methods Of Analysis Of Biopolymer Sequences 1992

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Simon Gindikin:
Mathematical Methods Of Analysis Of Biopolymer Sequences, Proceedings of a DIMACS Workshop. DIMACS Series in Discrete Mathematics and Theoretical Computer Science 8, DIMACS/AMS 1992, ISBN 978-0-8218-6601-6
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Forword. Mathematical Methods Of Analysis Of Biopolymer Sequences 1992: ix-
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Preface. Mathematical Methods Of Analysis Of Biopolymer Sequences 1992: xi-

I. Some Problems of Mathematical Statistics

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Andrey M. Leontovich:
On the Optimality of the Dayhoff Matrix for Computing the Similarity Score Between Fragments of Biological Sequences. 1-10
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Vladimir I. Piterbarg:
On the Distribution of the Maximum Similarity Score for Fragments of Two Random Sequences. 11-18

II. Surveys and Methodology

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Mikhail S. Gelfand:
Computer Functional Analysis of Nucleotide Sequences: Problems and Approaches. 19-62
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Eugene V. Koonin:
Comparative Analysis of Biopolymer Sequences: Reflections on the Validity of the Methodology and the Underlying General Principles. 63-74

III. Methods and Algorithms

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D. R. Davydov, I. Erlikh, E. E. Klotz, V. G. Fridman:
A New Method for Recognition of Structural and Functional Motifs in Protein Sequences Based on the Principal Component Analysis of Profiles of Physico-Chemical Properties. 75-86
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Mikhail S. Gelfand:
Prediction of Protein-Coding Regions in DNA of Higher Eukaryotes. 87-98
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Pavel A. Pevzner:
DNA Physical Mapping, Flows in Networks and Minimum Cycles Mean in Graphs. 99-112
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Mikhail A. Roytberg:
Fast Algorithm for Optimal Aligning of Symbol Sequences. 113-126

IV. Software

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L. I. Brodsky, A. V. Vasilyev, Ya. L. Kalaydzidis, Yu. S. Osipov, R. L. Tatuzov, S. I. Feranchuk:
GeneBee: The Program Package for Biopolymer Structure Analysis. 127-140
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R. L. Tatuzov, T. A. Mamikonova:
Data Compression and the Use of Vector Operations for the Fast Search Problems in Analysis of Biological Sequences. 141-144
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R. L. Tatuzov, T. A. Mamikonova:
Organization and Storage of Information in Molecular Genetics Data Banks. 145-150

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